RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 GORABQ5T7V8 394 aa24.3■■□□□ 1.48
TNFRSF1B-204ENST00000536782 CPA4Q9UI42 421 aa24.3■■□□□ 1.48
TNFRSF1B-204ENST00000536782 MROH7-TTC4A0A0A0MT08 1334 aa24.3■■□□□ 1.48
TNFRSF1B-204ENST00000536782 DOCK2Q92608 1830 aa24.29■■□□□ 1.48
TNFRSF1B-204ENST00000536782 PHF20L1A8MW92 1017 aa24.29■■□□□ 1.48
TNFRSF1B-204ENST00000536782 CXCL11O14625 94 aa24.29■■□□□ 1.48
TNFRSF1B-204ENST00000536782 EN2P19622 333 aaPredicted RBP24.29■■□□□ 1.48
TNFRSF1B-204ENST00000536782 MECOMQ03112 1051 aa24.29■■□□□ 1.48
TNFRSF1B-204ENST00000536782 G3BP1Q13283 466 aaKnown RBP eCLIP24.29■■□□□ 1.48
TNFRSF1B-204ENST00000536782 MOGSQ13724 837 aa24.29■■□□□ 1.48
TNFRSF1B-204ENST00000536782 SH3BP5LQ7L8J4 393 aa24.29■■□□□ 1.48
TNFRSF1B-204ENST00000536782 SCYL3Q8IZE3 742 aa24.29■■□□□ 1.48
TNFRSF1B-204ENST00000536782 PICK1Q9NRD5 415 aa24.29■■□□□ 1.48
TNFRSF1B-204ENST00000536782 HMG20BQ9P0W2 317 aa24.29■■□□□ 1.48
TNFRSF1B-204ENST00000536782 PNMA6EA0A0J9YXQ4 647 aa24.28■■□□□ 1.48
TNFRSF1B-204ENST00000536782 DDTLA6NHG4 134 aaPredicted RBP24.28■■□□□ 1.48
TNFRSF1B-204ENST00000536782 PRMT2P55345 433 aa24.28■■□□□ 1.48
TNFRSF1B-204ENST00000536782 PICALMQ13492 652 aa24.28■■□□□ 1.48
TNFRSF1B-204ENST00000536782 SPATA5Q8NB90 893 aa24.28■■□□□ 1.48
TNFRSF1B-204ENST00000536782 DDX4Q9NQI0 724 aaKnown RBP24.28■■□□□ 1.48
TNFRSF1B-204ENST00000536782 ZHX2Q9Y6X8 837 aa24.28■■□□□ 1.48
TNFRSF1B-204ENST00000536782 GPR75-ASB3A0A0A6YYF3 556 aa24.27■■□□□ 1.48
TNFRSF1B-204ENST00000536782 MAP3K10Q02779 954 aa24.27■■□□□ 1.48
TNFRSF1B-204ENST00000536782 PCDH10Q9P2E7 1040 aa24.27■■□□□ 1.48
TNFRSF1B-204ENST00000536782 PTPRFP10586 1907 aa24.27■■□□□ 1.48
TNFRSF1B-204ENST00000536782 ECM2O94769 699 aaPredicted RBP24.26■■□□□ 1.47
TNFRSF1B-204ENST00000536782 LDHCP07864 332 aa24.26■■□□□ 1.47
TNFRSF1B-204ENST00000536782 PTPRAP18433 802 aa24.26■■□□□ 1.47
TNFRSF1B-204ENST00000536782 ARID4AP29374 1257 aaPredicted RBP24.26■■□□□ 1.47
TNFRSF1B-204ENST00000536782 GSTO1P78417 241 aa24.26■■□□□ 1.47
TNFRSF1B-204ENST00000536782 SLC4A8Q2Y0W8 1093 aa24.26■■□□□ 1.47
TNFRSF1B-204ENST00000536782 ZKSCAN2Q63HK3 967 aa24.26■■□□□ 1.47
TNFRSF1B-204ENST00000536782 PI16Q6UXB8 463 aa24.26■■□□□ 1.47
TNFRSF1B-204ENST00000536782 PARK7Q99497 189 aaKnown RBP24.26■■□□□ 1.47
TNFRSF1B-204ENST00000536782 ADGRA2Q96PE1 1338 aa24.26■■□□□ 1.47
TNFRSF1B-204ENST00000536782 MGAMO43451 1857 aa24.26■■□□□ 1.47
TNFRSF1B-204ENST00000536782 PSMC4P43686 418 aa24.25■■□□□ 1.47
TNFRSF1B-204ENST00000536782 RHBDL3P58872 404 aa24.25■■□□□ 1.47
TNFRSF1B-204ENST00000536782 GPAT2Q6NUI2 795 aa24.25■■□□□ 1.47
TNFRSF1B-204ENST00000536782 FASTKD5Q7L8L6 764 aaKnown RBP24.25■■□□□ 1.47
TNFRSF1B-204ENST00000536782 TMEM57Q8N5G2 664 aa24.25■■□□□ 1.47
TNFRSF1B-204ENST00000536782 SH3TC2Q8TF17 1288 aa24.25■■□□□ 1.47
TNFRSF1B-204ENST00000536782 ZNF384Q8TF68 577 aa24.25■■□□□ 1.47
TNFRSF1B-204ENST00000536782 PHIPQ8WWQ0 1821 aa24.25■■□□□ 1.47
TNFRSF1B-204ENST00000536782 A0A0G2JLL6 359 aaPredicted RBP24.24■■□□□ 1.47
TNFRSF1B-204ENST00000536782 CTNND1O60716 968 aaKnown RBP24.24■■□□□ 1.47
TNFRSF1B-204ENST00000536782 MAP4K4O95819 1239 aaPredicted RBP24.24■■□□□ 1.47
TNFRSF1B-204ENST00000536782 HOXD10P28358 340 aa24.24■■□□□ 1.47
TNFRSF1B-204ENST00000536782 CTGFP29279 349 aa24.24■■□□□ 1.47
TNFRSF1B-204ENST00000536782 TBC1D9Q6ZT07 1266 aa24.24■■□□□ 1.47
TNFRSF1B-204ENST00000536782 PRRT2Q7Z6L0 340 aaPredicted RBP24.24■■□□□ 1.47
TNFRSF1B-204ENST00000536782 NSUN4Q96CB9 384 aaKnown RBP24.24■■□□□ 1.47
TNFRSF1B-204ENST00000536782 TRIM47Q96LD4 638 aa24.24■■□□□ 1.47
TNFRSF1B-204ENST00000536782 RAI14Q9P0K7 980 aa24.24■■□□□ 1.47
TNFRSF1B-204ENST00000536782 AFG3L2Q9Y4W6 797 aa24.24■■□□□ 1.47
TNFRSF1B-204ENST00000536782 NPM3O75607 178 aaKnown RBP24.23■■□□□ 1.47
TNFRSF1B-204ENST00000536782 FMNL1O95466 1100 aaPredicted RBP24.23■■□□□ 1.47
TNFRSF1B-204ENST00000536782 MYCP01106 439 aaPredicted RBP24.23■■□□□ 1.47
TNFRSF1B-204ENST00000536782 UQCRFS1P1P0C7P4 283 aa24.23■■□□□ 1.47
TNFRSF1B-204ENST00000536782 SRRDQ9UH36 339 aa24.23■■□□□ 1.47
TNFRSF1B-204ENST00000536782 SLURP2P0DP57 97 aa24.22■■□□□ 1.47
TNFRSF1B-204ENST00000536782 CYP2C8P10632 490 aa24.22■■□□□ 1.47
TNFRSF1B-204ENST00000536782 MCAMP43121 646 aa24.22■■□□□ 1.47
TNFRSF1B-204ENST00000536782 GCC1Q96CN9 775 aa24.22■■□□□ 1.47
TNFRSF1B-204ENST00000536782 TBC1D12O60347 775 aa24.21■■□□□ 1.47
TNFRSF1B-204ENST00000536782 OSBPP22059 807 aa24.21■■□□□ 1.47
TNFRSF1B-204ENST00000536782 GADL1Q6ZQY3 521 aa24.21■■□□□ 1.47
TNFRSF1B-204ENST00000536782 LRP2BPQ9P2M1 347 aa24.21■■□□□ 1.47
TNFRSF1B-204ENST00000536782 DOCK3Q8IZD9 2030 aa24.21■■□□□ 1.47
TNFRSF1B-204ENST00000536782 BCRP11274 1271 aa24.2■■□□□ 1.46
TNFRSF1B-204ENST00000536782 POLA2Q14181 598 aa24.2■■□□□ 1.46
TNFRSF1B-204ENST00000536782 RAET1EQ8TD07 263 aa24.2■■□□□ 1.46
TNFRSF1B-204ENST00000536782 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.2■■□□□ 1.46
TNFRSF1B-204ENST00000536782 GPR108Q9NPR9 543 aa24.2■■□□□ 1.46
TNFRSF1B-204ENST00000536782 SLC45A1Q9Y2W3 748 aa24.2■■□□□ 1.46
TNFRSF1B-204ENST00000536782 OS9Q13438 667 aaPredicted RBP24.19■■□□□ 1.46
TNFRSF1B-204ENST00000536782 DOCK1Q14185 1865 aa24.19■■□□□ 1.46
TNFRSF1B-204ENST00000536782 TRIOBPQ9H2D6 2365 aa24.18■■□□□ 1.46
TNFRSF1B-204ENST00000536782 MYPNQ86TC9 1320 aa24.18■■□□□ 1.46
TNFRSF1B-204ENST00000536782 TRIM75PA6NK02 468 aa24.18■■□□□ 1.46
TNFRSF1B-204ENST00000536782 FCGRTP55899 365 aa24.18■■□□□ 1.46
TNFRSF1B-204ENST00000536782 ATP8B2P98198 1209 aa24.18■■□□□ 1.46
TNFRSF1B-204ENST00000536782 HNRNPUQ00839 825 aaKnown RBP eCLIP24.18■■□□□ 1.46
TNFRSF1B-204ENST00000536782 TNNI3KQ59H18 835 aa24.18■■□□□ 1.46
TNFRSF1B-204ENST00000536782 CCDC158Q5M9N0 1113 aa24.18■■□□□ 1.46
TNFRSF1B-204ENST00000536782 TTC39AQ5SRH9 613 aa24.18■■□□□ 1.46
TNFRSF1B-204ENST00000536782 SSH3Q8TE77 659 aa24.18■■□□□ 1.46
TNFRSF1B-204ENST00000536782 NOL10Q9BSC4 688 aaKnown RBP24.18■■□□□ 1.46
TNFRSF1B-204ENST00000536782 OSBPL5Q9H0X9 879 aaPredicted RBP24.18■■□□□ 1.46
TNFRSF1B-204ENST00000536782 FPGT-TNNI3KV9GXZ4 949 aa24.18■■□□□ 1.46
TNFRSF1B-204ENST00000536782 FAM196BA6NMK8 535 aa24.17■■□□□ 1.46
TNFRSF1B-204ENST00000536782 GRK4P32298 578 aa24.17■■□□□ 1.46
TNFRSF1B-204ENST00000536782 FTSJ3Q8IY81 847 aaKnown RBP24.17■■□□□ 1.46
TNFRSF1B-204ENST00000536782 TEX11Q8IYF3 940 aa24.17■■□□□ 1.46
TNFRSF1B-204ENST00000536782 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.17■■□□□ 1.46
TNFRSF1B-204ENST00000536782 COL2A1P02458 1487 aaPredicted RBP24.17■■□□□ 1.46
TNFRSF1B-204ENST00000536782 SURF6O75683 361 aaKnown RBP24.16■■□□□ 1.46
TNFRSF1B-204ENST00000536782 HABP4Q5JVS0 413 aaKnown RBP24.16■■□□□ 1.46
TNFRSF1B-204ENST00000536782 SNRKQ9NRH2 765 aa24.16■■□□□ 1.46
TNFRSF1B-204ENST00000536782 CCDC84Q86UT8 332 aaPredicted RBP24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms