RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 XYLBO75191 536 aa9.81□□□□□ -0.84
CCDC60-203ENST00000536742 DDB1Q16531 1140 aa9.81□□□□□ -0.84
CCDC60-203ENST00000536742 GSX2Q9BZM3 304 aa9.81□□□□□ -0.84
CCDC60-203ENST00000536742 CCDC87Q9NVE4 849 aa9.81□□□□□ -0.84
CCDC60-203ENST00000536742 QSER1Q2KHR3 1735 aa9.81□□□□□ -0.84
CCDC60-203ENST00000536742 PAPPAQ13219 1627 aa9.81□□□□□ -0.84
CCDC60-203ENST00000536742 BRD4O60885 1362 aaPredicted RBP9.8□□□□□ -0.84
CCDC60-203ENST00000536742 KIAA0232Q92628 1395 aa9.8□□□□□ -0.84
CCDC60-203ENST00000536742 MAP3K6O95382 1288 aa9.8□□□□□ -0.84
CCDC60-203ENST00000536742 GRNP28799 593 aaKnown RBP9.8□□□□□ -0.84
CCDC60-203ENST00000536742 COL19A1Q14993 1142 aa9.8□□□□□ -0.84
CCDC60-203ENST00000536742 CHRNA2Q15822 529 aa9.8□□□□□ -0.84
CCDC60-203ENST00000536742 ZNF827Q17R98 1081 aa9.8□□□□□ -0.84
CCDC60-203ENST00000536742 NLRP13Q86W25 1043 aa9.8□□□□□ -0.84
CCDC60-203ENST00000536742 ALKBH8Q96BT7 664 aaKnown RBP9.8□□□□□ -0.84
CCDC60-203ENST00000536742 PNMA5Q96PV4 448 aa9.8□□□□□ -0.84
CCDC60-203ENST00000536742 C10orf71Q711Q0 1435 aa9.8□□□□□ -0.84
CCDC60-203ENST00000536742 PCBP4P57723 403 aaKnown RBP9.79□□□□□ -0.84
CCDC60-203ENST00000536742 ZNF468Q5VIY5 522 aaPredicted RBP9.79□□□□□ -0.84
CCDC60-203ENST00000536742 KDM2BQ8NHM5 1336 aa9.79□□□□□ -0.84
CCDC60-203ENST00000536742 E9PCH4 1651 aa9.78□□□□□ -0.84
CCDC60-203ENST00000536742 LBX1P52954 281 aa9.78□□□□□ -0.84
CCDC60-203ENST00000536742 TRIP4Q15650 581 aaPredicted RBP9.78□□□□□ -0.84
CCDC60-203ENST00000536742 ALS2Q96Q42 1657 aa9.77□□□□□ -0.84
CCDC60-203ENST00000536742 DLL1O00548 723 aa9.77□□□□□ -0.85
CCDC60-203ENST00000536742 MFAP1P55081 439 aaKnown RBP9.77□□□□□ -0.85
CCDC60-203ENST00000536742 PCSK7Q16549 785 aa9.77□□□□□ -0.85
CCDC60-203ENST00000536742 C8orf34Q49A92 452 aa9.77□□□□□ -0.85
CCDC60-203ENST00000536742 ZNF438Q7Z4V0 828 aa9.77□□□□□ -0.85
CCDC60-203ENST00000536742 ALYREFQ86V81 257 aaKnown RBP9.77□□□□□ -0.85
CCDC60-203ENST00000536742 TMC1Q8TDI8 760 aa9.77□□□□□ -0.85
CCDC60-203ENST00000536742 PMEPA1Q969W9 287 aa9.77□□□□□ -0.85
CCDC60-203ENST00000536742 HCN2Q9UL51 889 aa9.77□□□□□ -0.85
CCDC60-203ENST00000536742 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.77□□□□□ -0.85
CCDC60-203ENST00000536742 PNPLA7Q6ZV29 1317 aa9.77□□□□□ -0.85
CCDC60-203ENST00000536742 GPRASP1Q5JY77 1395 aa9.76□□□□□ -0.85
CCDC60-203ENST00000536742 CRYBG1Q9Y4K1 1723 aa9.76□□□□□ -0.85
CCDC60-203ENST00000536742 RGPD8O14715 1765 aaPredicted RBP9.76□□□□□ -0.85
CCDC60-203ENST00000536742 CICQ96RK0 1608 aaPredicted RBP9.76□□□□□ -0.85
CCDC60-203ENST00000536742 GNB5O14775 395 aa9.76□□□□□ -0.85
CCDC60-203ENST00000536742 MSTNO14793 375 aa9.76□□□□□ -0.85
CCDC60-203ENST00000536742 SIN3BO75182 1162 aa9.76□□□□□ -0.85
CCDC60-203ENST00000536742 ALAS2P22557 587 aa9.76□□□□□ -0.85
CCDC60-203ENST00000536742 PLA2G4EQ3MJ16 856 aa9.76□□□□□ -0.85
CCDC60-203ENST00000536742 GCC1Q96CN9 775 aa9.76□□□□□ -0.85
CCDC60-203ENST00000536742 ELP3Q9H9T3 547 aa9.76□□□□□ -0.85
CCDC60-203ENST00000536742 PXDNLA1KZ92 1463 aa9.76□□□□□ -0.85
CCDC60-203ENST00000536742 ANKRD30BQ9BXX2 1392 aa9.75□□□□□ -0.85
CCDC60-203ENST00000536742 HOXD8P13378 290 aaPredicted RBP9.75□□□□□ -0.85
CCDC60-203ENST00000536742 SOX18P35713 384 aa9.75□□□□□ -0.85
CCDC60-203ENST00000536742 FGD1P98174 961 aa9.75□□□□□ -0.85
CCDC60-203ENST00000536742 LINC00114Q6XXX2 140 aa9.75□□□□□ -0.85
CCDC60-203ENST00000536742 DNAJC14Q6Y2X3 702 aaPredicted RBP9.75□□□□□ -0.85
CCDC60-203ENST00000536742 CHSY3Q70JA7 882 aa9.75□□□□□ -0.85
CCDC60-203ENST00000536742 TMC7Q7Z402 723 aa9.75□□□□□ -0.85
CCDC60-203ENST00000536742 WAPLQ7Z5K2 1190 aa9.75□□□□□ -0.85
CCDC60-203ENST00000536742 SYT9Q86SS6 491 aa9.75□□□□□ -0.85
CCDC60-203ENST00000536742 FCHSD1Q86WN1 690 aa9.75□□□□□ -0.85
CCDC60-203ENST00000536742 SNX29Q8TEQ0 813 aa9.75□□□□□ -0.85
CCDC60-203ENST00000536742 SLC30A3Q99726 388 aa9.75□□□□□ -0.85
CCDC60-203ENST00000536742 GGNBP2Q9H3C7 697 aa9.75□□□□□ -0.85
CCDC60-203ENST00000536742 ABI2Q9NYB9 513 aaPredicted RBP9.75□□□□□ -0.85
CCDC60-203ENST00000536742 PODXL2Q9NZ53 605 aa9.75□□□□□ -0.85
CCDC60-203ENST00000536742 TFCP2L1Q9NZI6 479 aa9.75□□□□□ -0.85
CCDC60-203ENST00000536742 KLF15Q9UIH9 416 aa9.75□□□□□ -0.85
CCDC60-203ENST00000536742 USP20Q9Y2K6 914 aa9.75□□□□□ -0.85
CCDC60-203ENST00000536742 TRPM3Q9HCF6 1732 aaPredicted RBP9.75□□□□□ -0.85
CCDC60-203ENST00000536742 PLEKHG2Q9H7P9 1386 aa9.75□□□□□ -0.85
CCDC60-203ENST00000536742 LRRC37A3O60309 1634 aa9.74□□□□□ -0.85
CCDC60-203ENST00000536742 PHRF1Q9P1Y6 1649 aaKnown RBP9.74□□□□□ -0.85
CCDC60-203ENST00000536742 TREHO43280 583 aa9.74□□□□□ -0.85
CCDC60-203ENST00000536742 IGHA2P01877 340 aa9.74□□□□□ -0.85
CCDC60-203ENST00000536742 RARAP10276 462 aa9.74□□□□□ -0.85
CCDC60-203ENST00000536742 ZC3H6P61129 1189 aaKnown RBP9.74□□□□□ -0.85
CCDC60-203ENST00000536742 GRIN2CQ14957 1233 aa9.74□□□□□ -0.85
CCDC60-203ENST00000536742 TTC39BQ5VTQ0 682 aaPredicted RBP9.74□□□□□ -0.85
CCDC60-203ENST00000536742 MARCH10Q8NA82 808 aaPredicted RBP9.74□□□□□ -0.85
CCDC60-203ENST00000536742 DNAJC25Q9H1X3 360 aa9.74□□□□□ -0.85
CCDC60-203ENST00000536742 IGSF1Q8N6C5 1336 aa9.74□□□□□ -0.85
CCDC60-203ENST00000536742 CLTCL1P53675 1640 aa9.74□□□□□ -0.85
CCDC60-203ENST00000536742 AKAP12Q02952 1782 aa9.73□□□□□ -0.85
CCDC60-203ENST00000536742 NFKB1P19838 968 aa9.73□□□□□ -0.85
CCDC60-203ENST00000536742 TNFRSF25Q93038 417 aa9.73□□□□□ -0.85
CCDC60-203ENST00000536742 BHMTQ93088 406 aa9.73□□□□□ -0.85
CCDC60-203ENST00000536742 NOP53Q9NZM5 478 aaKnown RBP9.73□□□□□ -0.85
CCDC60-203ENST00000536742 DAPK1P53355 1430 aa9.73□□□□□ -0.85
CCDC60-203ENST00000536742 SASH3O75995 380 aa9.72□□□□□ -0.85
CCDC60-203ENST00000536742 PSAPP07602 524 aa9.72□□□□□ -0.85
CCDC60-203ENST00000536742 DGKGP49619 791 aa9.72□□□□□ -0.85
CCDC60-203ENST00000536742 DSC3Q14574 896 aa9.72□□□□□ -0.85
CCDC60-203ENST00000536742 OR13H1Q8NG92 308 aa9.72□□□□□ -0.85
CCDC60-203ENST00000536742 TLR7Q9NYK1 1049 aaKnown RBP9.72□□□□□ -0.85
CCDC60-203ENST00000536742 CRB1P82279 1406 aa9.72□□□□□ -0.85
CCDC60-203ENST00000536742 ELOA3CA0A087WX78 387 aaPredicted RBP9.71□□□□□ -0.86
CCDC60-203ENST00000536742 ELOA3DA6NLF2 546 aaPredicted RBP9.71□□□□□ -0.86
CCDC60-203ENST00000536742 ADARB2-AS1A8MUL3 147 aa9.71□□□□□ -0.86
CCDC60-203ENST00000536742 TNFRSF21O75509 655 aa9.71□□□□□ -0.86
CCDC60-203ENST00000536742 HOXB4P17483 251 aaPredicted RBP9.71□□□□□ -0.86
CCDC60-203ENST00000536742 TARSP26639 723 aaKnown RBP9.71□□□□□ -0.86
CCDC60-203ENST00000536742 NRLP54845 237 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms