RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 ZFPM1Q8IX07 1006 aa15.35■□□□□ 0.05
PRKDC-207ENST00000536483 PANK1Q8TE04 598 aa15.35■□□□□ 0.05
PRKDC-207ENST00000536483 XAGE2Q96GT9 111 aa15.35■□□□□ 0.05
PRKDC-207ENST00000536483 FAM198AQ9UFP1 575 aa15.35■□□□□ 0.05
PRKDC-207ENST00000536483 KCNH4Q9UQ05 1017 aa15.35■□□□□ 0.05
PRKDC-207ENST00000536483 ZSWIM8A7E2V4 1837 aa15.35■□□□□ 0.05
PRKDC-207ENST00000536483 GNRH1P01148 92 aa15.34■□□□□ 0.05
PRKDC-207ENST00000536483 ADORA1P30542 326 aa15.34■□□□□ 0.05
PRKDC-207ENST00000536483 PDE3AQ14432 1141 aa15.34■□□□□ 0.05
PRKDC-207ENST00000536483 ZBTB40Q9NUA8 1239 aa15.34■□□□□ 0.05
PRKDC-207ENST00000536483 MYH13Q9UKX3 1938 aa15.33■□□□□ 0.05
PRKDC-207ENST00000536483 PSMC4P43686 418 aa15.33■□□□□ 0.04
PRKDC-207ENST00000536483 PRMT2P55345 433 aa15.33■□□□□ 0.04
PRKDC-207ENST00000536483 MOGSQ13724 837 aa15.33■□□□□ 0.04
PRKDC-207ENST00000536483 NOL9Q5SY16 702 aaKnown RBP15.33■□□□□ 0.04
PRKDC-207ENST00000536483 CEP85Q6P2H3 762 aa15.33■□□□□ 0.04
PRKDC-207ENST00000536483 ZGPATQ8N5A5 531 aaKnown RBP15.33■□□□□ 0.04
PRKDC-207ENST00000536483 FAM163AQ96GL9 167 aaPredicted RBP15.33■□□□□ 0.04
PRKDC-207ENST00000536483 CHMP4BQ9H444 224 aaKnown RBP15.33■□□□□ 0.04
PRKDC-207ENST00000536483 DDX19BQ9UMR2 479 aa15.33■□□□□ 0.04
PRKDC-207ENST00000536483 IGSF3O75054 1194 aa15.32■□□□□ 0.04
PRKDC-207ENST00000536483 ARID4AP29374 1257 aaPredicted RBP15.32■□□□□ 0.04
PRKDC-207ENST00000536483 RASGRF1Q13972 1273 aa15.32■□□□□ 0.04
PRKDC-207ENST00000536483 RPAP2Q8IXW5 612 aaPredicted RBP15.32■□□□□ 0.04
PRKDC-207ENST00000536483 ZNF512BQ96KM6 892 aaPredicted RBP15.32■□□□□ 0.04
PRKDC-207ENST00000536483 TRIM47Q96LD4 638 aa15.32■□□□□ 0.04
PRKDC-207ENST00000536483 SRRDQ9UH36 339 aa15.32■□□□□ 0.04
PRKDC-207ENST00000536483 AK9Q5TCS8 1911 aa15.32■□□□□ 0.04
PRKDC-207ENST00000536483 SURF6O75683 361 aaKnown RBP15.31■□□□□ 0.04
PRKDC-207ENST00000536483 FMNL1O95466 1100 aaPredicted RBP15.31■□□□□ 0.04
PRKDC-207ENST00000536483 OSBPP22059 807 aa15.31■□□□□ 0.04
PRKDC-207ENST00000536483 RGS3P49796 1198 aa15.31■□□□□ 0.04
PRKDC-207ENST00000536483 MTFR1Q15390 333 aa15.31■□□□□ 0.04
PRKDC-207ENST00000536483 C1orf115Q9H7X2 142 aa15.31■□□□□ 0.04
PRKDC-207ENST00000536483 ADGRA2Q96PE1 1338 aa15.31■□□□□ 0.04
PRKDC-207ENST00000536483 PHF20L1A8MW92 1017 aa15.3■□□□□ 0.04
PRKDC-207ENST00000536483 CXCL11O14625 94 aa15.3■□□□□ 0.04
PRKDC-207ENST00000536483 CYP2C8P10632 490 aa15.3■□□□□ 0.04
PRKDC-207ENST00000536483 HOXD10P28358 340 aa15.3■□□□□ 0.04
PRKDC-207ENST00000536483 TNNI3KQ59H18 835 aa15.3■□□□□ 0.04
PRKDC-207ENST00000536483 GPAT2Q6NUI2 795 aa15.3■□□□□ 0.04
PRKDC-207ENST00000536483 RAET1EQ8TD07 263 aa15.3■□□□□ 0.04
PRKDC-207ENST00000536483 IDI2Q9BXS1 227 aa15.3■□□□□ 0.04
PRKDC-207ENST00000536483 ABCF2Q9UG63 623 aa15.3■□□□□ 0.04
PRKDC-207ENST00000536483 FPGT-TNNI3KV9GXZ4 949 aa15.3■□□□□ 0.04
PRKDC-207ENST00000536483 ATRNL1Q5VV63 1379 aa15.29■□□□□ 0.04
PRKDC-207ENST00000536483 GAKO14976 1311 aa15.29■□□□□ 0.04
PRKDC-207ENST00000536483 ENTPD3O75355 529 aa15.29■□□□□ 0.04
PRKDC-207ENST00000536483 UQCRFS1P1P0C7P4 283 aa15.29■□□□□ 0.04
PRKDC-207ENST00000536483 SLURP2P0DP57 97 aa15.29■□□□□ 0.04
PRKDC-207ENST00000536483 SPTY2D1Q68D10 685 aaPredicted RBP15.29■□□□□ 0.04
PRKDC-207ENST00000536483 SH3BP5LQ7L8J4 393 aa15.29■□□□□ 0.04
PRKDC-207ENST00000536483 DZIP1Q86YF9 867 aaKnown RBP15.29■□□□□ 0.04
PRKDC-207ENST00000536483 ZSCAN29Q8IWY8 852 aaPredicted RBP15.29■□□□□ 0.04
PRKDC-207ENST00000536483 SCYL3Q8IZE3 742 aa15.29■□□□□ 0.04
PRKDC-207ENST00000536483 NEUROD6Q96NK8 337 aa15.29■□□□□ 0.04
PRKDC-207ENST00000536483 PARK7Q99497 189 aaKnown RBP15.29■□□□□ 0.04
PRKDC-207ENST00000536483 HMG20BQ9P0W2 317 aa15.29■□□□□ 0.04
PRKDC-207ENST00000536483 COLQQ9Y215 455 aaPredicted RBP15.29■□□□□ 0.04
PRKDC-207ENST00000536483 COG6Q9Y2V7 657 aa15.29■□□□□ 0.04
PRKDC-207ENST00000536483 ZHX2Q9Y6X8 837 aa15.29■□□□□ 0.04
PRKDC-207ENST00000536483 MYPNQ86TC9 1320 aa15.28■□□□□ 0.04
PRKDC-207ENST00000536483 DDTLA6NHG4 134 aaPredicted RBP15.28■□□□□ 0.04
PRKDC-207ENST00000536483 BCRP11274 1271 aa15.28■□□□□ 0.04
PRKDC-207ENST00000536483 PTPRAP18433 802 aa15.28■□□□□ 0.04
PRKDC-207ENST00000536483 GRK4P32298 578 aa15.28■□□□□ 0.04
PRKDC-207ENST00000536483 HSP90AB4PQ58FF6 505 aa15.28■□□□□ 0.04
PRKDC-207ENST00000536483 SHISA4Q96DD7 197 aa15.28■□□□□ 0.04
PRKDC-207ENST00000536483 DDX4Q9NQI0 724 aaKnown RBP15.28■□□□□ 0.04
PRKDC-207ENST00000536483 PICK1Q9NRD5 415 aa15.28■□□□□ 0.04
PRKDC-207ENST00000536483 CEP290O15078 2479 aa15.27■□□□□ 0.04
PRKDC-207ENST00000536483 A0A0G2JLL6 359 aaPredicted RBP15.27■□□□□ 0.04
PRKDC-207ENST00000536483 H0YGN5 161 aa15.27■□□□□ 0.04
PRKDC-207ENST00000536483 BTDP43251 543 aa15.27■□□□□ 0.04
PRKDC-207ENST00000536483 FXR1P51114 621 aaKnown RBP eCLIP15.27■□□□□ 0.047e-7■■■■□ 20
PRKDC-207ENST00000536483 PRKCZQ05513 592 aa15.27■□□□□ 0.04
PRKDC-207ENST00000536483 PICALMQ13492 652 aa15.27■□□□□ 0.04
PRKDC-207ENST00000536483 FASTKD5Q7L8L6 764 aaKnown RBP15.27■□□□□ 0.04
PRKDC-207ENST00000536483 PRRT2Q7Z6L0 340 aaPredicted RBP15.27■□□□□ 0.04
PRKDC-207ENST00000536483 ERC1Q8IUD2 1116 aa15.27■□□□□ 0.04
PRKDC-207ENST00000536483 SLF2Q8IX21 1173 aa15.27■□□□□ 0.04
PRKDC-207ENST00000536483 SIRT2Q8IXJ6 389 aa15.27■□□□□ 0.04
PRKDC-207ENST00000536483 SPATA5Q8NB90 893 aa15.27■□□□□ 0.04
PRKDC-207ENST00000536483 RFX7Q2KHR2 1363 aa15.26■□□□□ 0.03
PRKDC-207ENST00000536483 MYH2Q9UKX2 1941 aa15.26■□□□□ 0.03
PRKDC-207ENST00000536483 MAP4K4O95819 1239 aaPredicted RBP15.26■□□□□ 0.03
PRKDC-207ENST00000536483 MCAMP43121 646 aa15.26■□□□□ 0.03
PRKDC-207ENST00000536483 FCGRTP55899 365 aa15.26■□□□□ 0.03
PRKDC-207ENST00000536483 MAP3K10Q02779 954 aa15.26■□□□□ 0.03
PRKDC-207ENST00000536483 GORABQ5T7V8 394 aa15.26■□□□□ 0.03
PRKDC-207ENST00000536483 GADL1Q6ZQY3 521 aa15.26■□□□□ 0.03
PRKDC-207ENST00000536483 EAF2Q96CJ1 260 aaPredicted RBP15.26■□□□□ 0.03
PRKDC-207ENST00000536483 BIN2Q9UBW5 565 aaPredicted RBP15.26■□□□□ 0.03
PRKDC-207ENST00000536483 AFG3L2Q9Y4W6 797 aa15.26■□□□□ 0.03
PRKDC-207ENST00000536483 MROH7-TTC4A0A0A0MT08 1334 aa15.25■□□□□ 0.03
PRKDC-207ENST00000536483 GPR75-ASB3A0A0A6YYF3 556 aa15.25■□□□□ 0.03
PRKDC-207ENST00000536483 HMMRO75330 724 aa15.25■□□□□ 0.03
PRKDC-207ENST00000536483 NPM3O75607 178 aaKnown RBP15.25■□□□□ 0.03
PRKDC-207ENST00000536483 CCL5P13501 91 aa15.25■□□□□ 0.03
PRKDC-207ENST00000536483 OS9Q13438 667 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms