RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 BOLA2Q9H3K6 86 aa16.05■□□□□ 0.16
PRKDC-206ENST00000536429 SUPT16HQ9Y5B9 1047 aaKnown RBP16.05■□□□□ 0.16
PRKDC-206ENST00000536429 SNCAIPQ9Y6H5 919 aa16.05■□□□□ 0.16
PRKDC-206ENST00000536429 GOLIM4O00461 696 aa16.04■□□□□ 0.16
PRKDC-206ENST00000536429 CA12O43570 354 aa16.04■□□□□ 0.16
PRKDC-206ENST00000536429 TM4SF4P48230 202 aa16.04■□□□□ 0.16
PRKDC-206ENST00000536429 PPP4CP60510 307 aa16.04■□□□□ 0.16
PRKDC-206ENST00000536429 TSHZ3Q63HK5 1081 aa16.04■□□□□ 0.16
PRKDC-206ENST00000536429 DCAF15Q66K64 600 aa16.04■□□□□ 0.16
PRKDC-206ENST00000536429 ZSCAN29Q8IWY8 852 aaPredicted RBP16.04■□□□□ 0.16
PRKDC-206ENST00000536429 MIGA1Q8NAN2 632 aa16.04■□□□□ 0.16
PRKDC-206ENST00000536429 ZNF341Q9BYN7 854 aa16.04■□□□□ 0.16
PRKDC-206ENST00000536429 OTOFQ9HC10 1997 aa16.04■□□□□ 0.16
PRKDC-206ENST00000536429 ZBTB48P10074 688 aaPredicted RBP16.03■□□□□ 0.16
PRKDC-206ENST00000536429 ATP5JP18859 108 aa16.03■□□□□ 0.16
PRKDC-206ENST00000536429 SLFNL1Q499Z3 407 aa16.03■□□□□ 0.16
PRKDC-206ENST00000536429 EXOC6Q8TAG9 804 aa16.03■□□□□ 0.16
PRKDC-206ENST00000536429 HOOK2Q96ED9 719 aa16.03■□□□□ 0.16
PRKDC-206ENST00000536429 SAGE1Q9NXZ1 904 aa16.03■□□□□ 0.16
PRKDC-206ENST00000536429 ZNF112Q9UJU3 913 aa16.03■□□□□ 0.16
PRKDC-206ENST00000536429 CSADQ9Y600 493 aa16.03■□□□□ 0.16
PRKDC-206ENST00000536429 FAM196BA6NMK8 535 aa16.02■□□□□ 0.16
PRKDC-206ENST00000536429 IGF2BP3O00425 579 aaKnown RBP eCLIP16.02■□□□□ 0.16
PRKDC-206ENST00000536429 BAG3O95817 575 aa16.02■□□□□ 0.16
PRKDC-206ENST00000536429 CHGBP05060 677 aa16.02■□□□□ 0.16
PRKDC-206ENST00000536429 MAP3K12Q12852 859 aa16.02■□□□□ 0.16
PRKDC-206ENST00000536429 MAPKAPK5Q8IW41 473 aa16.02■□□□□ 0.16
PRKDC-206ENST00000536429 REM2Q8IYK8 340 aaPredicted RBP16.02■□□□□ 0.16
PRKDC-206ENST00000536429 OTUD7AQ8TE49 926 aaPredicted RBP16.02■□□□□ 0.16
PRKDC-206ENST00000536429 OTUD5Q96G74 571 aa16.02■□□□□ 0.16
PRKDC-206ENST00000536429 OSBPL5Q9H0X9 879 aaPredicted RBP16.02■□□□□ 0.16
PRKDC-206ENST00000536429 R3HDMLQ9H3Y0 253 aa16.02■□□□□ 0.16
PRKDC-206ENST00000536429 MYO5AQ9Y4I1 1855 aaKnown RBP16.01■□□□□ 0.15
PRKDC-206ENST00000536429 MAST2Q6P0Q8 1798 aa16.01■□□□□ 0.15
PRKDC-206ENST00000536429 MANSC4A6NHS7 340 aaPredicted RBP16.01■□□□□ 0.15
PRKDC-206ENST00000536429 SPDYE5A6NIY4 337 aa16.01■□□□□ 0.15
PRKDC-206ENST00000536429 PHF20L1A8MW92 1017 aa16.01■□□□□ 0.15
PRKDC-206ENST00000536429 NPM3O75607 178 aaKnown RBP16.01■□□□□ 0.15
PRKDC-206ENST00000536429 TBC1D8O95759 1140 aa16.01■□□□□ 0.15
PRKDC-206ENST00000536429 MAP4K4O95819 1239 aaPredicted RBP16.01■□□□□ 0.15
PRKDC-206ENST00000536429 PDE6AP16499 860 aa16.01■□□□□ 0.15
PRKDC-206ENST00000536429 SREBF2Q12772 1141 aa16.01■□□□□ 0.15
PRKDC-206ENST00000536429 TGFBRAP1Q8WUH2 860 aa16.01■□□□□ 0.15
PRKDC-206ENST00000536429 MS4A4AQ96JQ5 239 aa16.01■□□□□ 0.15
PRKDC-206ENST00000536429 HAUS7Q99871 368 aa16.01■□□□□ 0.15
PRKDC-206ENST00000536429 PTPN18Q99952 460 aa16.01■□□□□ 0.15
PRKDC-206ENST00000536429 NOL10Q9BSC4 688 aaKnown RBP16.01■□□□□ 0.15
PRKDC-206ENST00000536429 PAG1Q9NWQ8 432 aa16.01■□□□□ 0.15
PRKDC-206ENST00000536429 FLT1P17948 1338 aa16■□□□□ 0.15
PRKDC-206ENST00000536429 TCRBV5S4A2TA0A5A2 114 aa16■□□□□ 0.15
PRKDC-206ENST00000536429 IGSF3O75054 1194 aa16■□□□□ 0.15
PRKDC-206ENST00000536429 MAP3K10Q02779 954 aa16■□□□□ 0.15
PRKDC-206ENST00000536429 TTF1Q15361 905 aaPredicted RBP16■□□□□ 0.15
PRKDC-206ENST00000536429 SLC9C2Q5TAH2 1124 aa16■□□□□ 0.15
PRKDC-206ENST00000536429 IFNL1Q8IU54 200 aa16■□□□□ 0.15
PRKDC-206ENST00000536429 TNS4Q8IZW8 715 aa16■□□□□ 0.15
PRKDC-206ENST00000536429 BRI3BPQ8WY22 251 aa16■□□□□ 0.15
PRKDC-206ENST00000536429 ECHDC1Q9NTX5 307 aa16■□□□□ 0.15
PRKDC-206ENST00000536429 TESPA1A2RU30 521 aaPredicted RBP15.99■□□□□ 0.15
PRKDC-206ENST00000536429 IRF6O14896 467 aa15.99■□□□□ 0.15
PRKDC-206ENST00000536429 HDAC1Q13547 482 aaPredicted RBP15.99■□□□□ 0.15
PRKDC-206ENST00000536429 RRP1BQ14684 758 aaKnown RBP15.99■□□□□ 0.15
PRKDC-206ENST00000536429 ERO1BQ86YB8 467 aa15.99■□□□□ 0.15
PRKDC-206ENST00000536429 RIOK1Q9BRS2 568 aaKnown RBP15.99■□□□□ 0.15
PRKDC-206ENST00000536429 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.99■□□□□ 0.15
PRKDC-206ENST00000536429 ZNF532Q9HCE3 1301 aa15.98■□□□□ 0.15
PRKDC-206ENST00000536429 PLCG2P16885 1265 aa15.98■□□□□ 0.15
PRKDC-206ENST00000536429 IRX6P78412 446 aaPredicted RBP15.98■□□□□ 0.15
PRKDC-206ENST00000536429 SLC4A8Q2Y0W8 1093 aa15.98■□□□□ 0.15
PRKDC-206ENST00000536429 NOL9Q5SY16 702 aaKnown RBP15.98■□□□□ 0.15
PRKDC-206ENST00000536429 SAP30BPQ9UHR5 308 aaKnown RBP15.98■□□□□ 0.15
PRKDC-206ENST00000536429 COL2A1P02458 1487 aaPredicted RBP15.97■□□□□ 0.15
PRKDC-206ENST00000536429 PPIL2Q13356 520 aa15.97■□□□□ 0.15
PRKDC-206ENST00000536429 CCDC84Q86UT8 332 aaPredicted RBP15.97■□□□□ 0.15
PRKDC-206ENST00000536429 PALD1Q9ULE6 856 aa15.97■□□□□ 0.15
PRKDC-206ENST00000536429 DOCK2Q92608 1830 aa15.96■□□□□ 0.15
PRKDC-206ENST00000536429 CCL15-CCL14A0A0B4J2E2 113 aa15.96■□□□□ 0.15
PRKDC-206ENST00000536429 TBC1D12O60347 775 aa15.96■□□□□ 0.15
PRKDC-206ENST00000536429 ADD2P35612 726 aa15.96■□□□□ 0.15
PRKDC-206ENST00000536429 GTF2A2P52657 109 aa15.96■□□□□ 0.15
PRKDC-206ENST00000536429 INHBEP58166 350 aa15.96■□□□□ 0.15
PRKDC-206ENST00000536429 PPATQ06203 517 aa15.96■□□□□ 0.15
PRKDC-206ENST00000536429 CCL15Q16663 113 aa15.96■□□□□ 0.15
PRKDC-206ENST00000536429 ANKRD45Q5TZF3 282 aa15.96■□□□□ 0.15
PRKDC-206ENST00000536429 FAM43AQ8N2R8 423 aa15.96■□□□□ 0.15
PRKDC-206ENST00000536429 DNAJC18Q9H819 358 aa15.96■□□□□ 0.15
PRKDC-206ENST00000536429 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.96■□□□□ 0.15
PRKDC-206ENST00000536429 MAGEB6P1A0A0J9YX57 407 aa15.95■□□□□ 0.14
PRKDC-206ENST00000536429 IGHDP01880 384 aa15.95■□□□□ 0.14
PRKDC-206ENST00000536429 SHROOM1Q2M3G4 852 aaPredicted RBP15.95■□□□□ 0.14
PRKDC-206ENST00000536429 SCYL3Q8IZE3 742 aa15.95■□□□□ 0.14
PRKDC-206ENST00000536429 LCORLQ8N3X6 602 aa15.95■□□□□ 0.14
PRKDC-206ENST00000536429 PI4K2BQ8TCG2 481 aa15.95■□□□□ 0.14
PRKDC-206ENST00000536429 AK9Q5TCS8 1911 aa15.95■□□□□ 0.14
PRKDC-206ENST00000536429 SALL3Q9BXA9 1300 aa15.94■□□□□ 0.14
PRKDC-206ENST00000536429 PTPRAP18433 802 aa15.94■□□□□ 0.14
PRKDC-206ENST00000536429 USP5P45974 858 aa15.94■□□□□ 0.14
PRKDC-206ENST00000536429 JAG1P78504 1218 aa15.94■□□□□ 0.14
PRKDC-206ENST00000536429 EVX2Q03828 476 aa15.94■□□□□ 0.14
PRKDC-206ENST00000536429 SNAPC2Q13487 334 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 154 ms