RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 RFX7Q2KHR2 1363 aa16.15■□□□□ 0.18
RTN3-207ENST00000536011 BTBD19C9JJ37 291 aa16.15■□□□□ 0.18
RTN3-207ENST00000536011 TLR2O60603 784 aa16.15■□□□□ 0.18
RTN3-207ENST00000536011 ARID4AP29374 1257 aaPredicted RBP16.15■□□□□ 0.18
RTN3-207ENST00000536011 BTDP43251 543 aa16.15■□□□□ 0.18
RTN3-207ENST00000536011 MECOMQ03112 1051 aa16.15■□□□□ 0.18
RTN3-207ENST00000536011 MIER1Q8N108 512 aa16.15■□□□□ 0.18
RTN3-207ENST00000536011 GPR108Q9NPR9 543 aa16.15■□□□□ 0.18
RTN3-207ENST00000536011 HMG20BQ9P0W2 317 aa16.15■□□□□ 0.18
RTN3-207ENST00000536011 KCNH4Q9UQ05 1017 aa16.15■□□□□ 0.18
RTN3-207ENST00000536011 TNNQ9UQP3 1299 aa16.15■□□□□ 0.18
RTN3-207ENST00000536011 GNRH1P01148 92 aa16.14■□□□□ 0.17
RTN3-207ENST00000536011 ANKRD23Q86SG2 305 aa16.14■□□□□ 0.17
RTN3-207ENST00000536011 ITPRIPQ8IWB1 547 aa16.14■□□□□ 0.17
RTN3-207ENST00000536011 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.14■□□□□ 0.17
RTN3-207ENST00000536011 NOL10Q9BSC4 688 aaKnown RBP16.14■□□□□ 0.17
RTN3-207ENST00000536011 ATRNL1Q5VV63 1379 aa16.13■□□□□ 0.17
RTN3-207ENST00000536011 GPR75-ASB3A0A0A6YYF3 556 aa16.13■□□□□ 0.17
RTN3-207ENST00000536011 PICALMQ13492 652 aa16.13■□□□□ 0.17
RTN3-207ENST00000536011 POLA2Q14181 598 aa16.13■□□□□ 0.17
RTN3-207ENST00000536011 CCDC158Q5M9N0 1113 aa16.13■□□□□ 0.17
RTN3-207ENST00000536011 SAMD1Q6SPF0 538 aaPredicted RBP16.13■□□□□ 0.17
RTN3-207ENST00000536011 NBPF11Q86T75 865 aa16.13■□□□□ 0.17
RTN3-207ENST00000536011 SCYL3Q8IZE3 742 aa16.13■□□□□ 0.17
RTN3-207ENST00000536011 SSH3Q8TE77 659 aa16.13■□□□□ 0.17
RTN3-207ENST00000536011 ARMC5Q96C12 935 aa16.13■□□□□ 0.17
RTN3-207ENST00000536011 RAI14Q9P0K7 980 aa16.13■□□□□ 0.17
RTN3-207ENST00000536011 ZBED9Q6R2W3 1325 aa16.13■□□□□ 0.17
RTN3-207ENST00000536011 CXCL11O14625 94 aa16.12■□□□□ 0.17
RTN3-207ENST00000536011 IGSF3O75054 1194 aa16.12■□□□□ 0.17
RTN3-207ENST00000536011 ATP8B2P98198 1209 aa16.12■□□□□ 0.17
RTN3-207ENST00000536011 TTC39AQ5SRH9 613 aa16.12■□□□□ 0.17
RTN3-207ENST00000536011 ZFPM1Q8IX07 1006 aa16.12■□□□□ 0.17
RTN3-207ENST00000536011 PARK7Q99497 189 aaKnown RBP16.12■□□□□ 0.17
RTN3-207ENST00000536011 LRP2BPQ9P2M1 347 aa16.12■□□□□ 0.17
RTN3-207ENST00000536011 COL2A1P02458 1487 aaPredicted RBP16.11■□□□□ 0.17
RTN3-207ENST00000536011 PDHXO00330 501 aa16.11■□□□□ 0.17
RTN3-207ENST00000536011 CTNND1O60716 968 aaKnown RBP16.11■□□□□ 0.17
RTN3-207ENST00000536011 SURF6O75683 361 aaKnown RBP16.11■□□□□ 0.17
RTN3-207ENST00000536011 PRMT2P55345 433 aa16.11■□□□□ 0.17
RTN3-207ENST00000536011 LACTBP83111 547 aaPredicted RBP16.11■□□□□ 0.17
RTN3-207ENST00000536011 MAP3K10Q02779 954 aa16.11■□□□□ 0.17
RTN3-207ENST00000536011 SLC9C1Q4G0N8 1177 aa16.11■□□□□ 0.17
RTN3-207ENST00000536011 TNNI3KQ59H18 835 aa16.11■□□□□ 0.17
RTN3-207ENST00000536011 FASTKD5Q7L8L6 764 aaKnown RBP16.11■□□□□ 0.17
RTN3-207ENST00000536011 NSUN4Q96CB9 384 aaKnown RBP16.11■□□□□ 0.17
RTN3-207ENST00000536011 FPGT-TNNI3KV9GXZ4 949 aa16.11■□□□□ 0.17
RTN3-207ENST00000536011 BRCA2P51587 3418 aa16.1■□□□□ 0.17
RTN3-207ENST00000536011 PHF20L1A8MW92 1017 aa16.1■□□□□ 0.17
RTN3-207ENST00000536011 BAG3O95817 575 aa16.1■□□□□ 0.17
RTN3-207ENST00000536011 MS4A1P11836 297 aa16.1■□□□□ 0.17
RTN3-207ENST00000536011 PLCG2P16885 1265 aa16.1■□□□□ 0.17
RTN3-207ENST00000536011 MCAMP43121 646 aa16.1■□□□□ 0.17
RTN3-207ENST00000536011 PRPF38BQ5VTL8 546 aaKnown RBP16.1■□□□□ 0.17
RTN3-207ENST00000536011 PI16Q6UXB8 463 aa16.1■□□□□ 0.17
RTN3-207ENST00000536011 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.1■□□□□ 0.17
RTN3-207ENST00000536011 MAST2Q6P0Q8 1798 aa16.1■□□□□ 0.17
RTN3-207ENST00000536011 RBBP6Q7Z6E9 1792 aaKnown RBP16.1■□□□□ 0.17
RTN3-207ENST00000536011 DDTLA6NHG4 134 aaPredicted RBP16.09■□□□□ 0.17
RTN3-207ENST00000536011 TBC1D12O60347 775 aa16.09■□□□□ 0.17
RTN3-207ENST00000536011 PTPRAP18433 802 aa16.09■□□□□ 0.17
RTN3-207ENST00000536011 RHBDL3P58872 404 aa16.09■□□□□ 0.17
RTN3-207ENST00000536011 TBC1D9Q6ZT07 1266 aa16.09■□□□□ 0.17
RTN3-207ENST00000536011 SH3BP5LQ7L8J4 393 aa16.09■□□□□ 0.17
RTN3-207ENST00000536011 ZNF512BQ96KM6 892 aaPredicted RBP16.09■□□□□ 0.17
RTN3-207ENST00000536011 TMEM106CQ9BVX2 250 aa16.09■□□□□ 0.17
RTN3-207ENST00000536011 DDX4Q9NQI0 724 aaKnown RBP16.09■□□□□ 0.17
RTN3-207ENST00000536011 ZHX2Q9Y6X8 837 aa16.09■□□□□ 0.17
RTN3-207ENST00000536011 DOCK1Q14185 1865 aa16.08■□□□□ 0.17
RTN3-207ENST00000536011 A0A0G2JLL6 359 aaPredicted RBP16.08■□□□□ 0.16
RTN3-207ENST00000536011 ABCB7O75027 752 aa16.08■□□□□ 0.16
RTN3-207ENST00000536011 HOXD10P28358 340 aa16.08■□□□□ 0.16
RTN3-207ENST00000536011 NAA16Q6N069 864 aaPredicted RBP16.08■□□□□ 0.16
RTN3-207ENST00000536011 C17orf99Q6UX52 265 aa16.08■□□□□ 0.16
RTN3-207ENST00000536011 PRRT2Q7Z6L0 340 aaPredicted RBP16.08■□□□□ 0.16
RTN3-207ENST00000536011 ERC1Q8IUD2 1116 aa16.08■□□□□ 0.16
RTN3-207ENST00000536011 TEX11Q8IYF3 940 aa16.08■□□□□ 0.16
RTN3-207ENST00000536011 ZNF384Q8TF68 577 aa16.08■□□□□ 0.16
RTN3-207ENST00000536011 TBC1D2Q9BYX2 928 aa16.08■□□□□ 0.16
RTN3-207ENST00000536011 C1orf115Q9H7X2 142 aa16.08■□□□□ 0.16
RTN3-207ENST00000536011 SLC45A1Q9Y2W3 748 aa16.08■□□□□ 0.16
RTN3-207ENST00000536011 NOP58Q9Y2X3 529 aaKnown RBP16.08■□□□□ 0.16
RTN3-207ENST00000536011 PTCH2Q9Y6C5 1203 aa16.08■□□□□ 0.16
RTN3-207ENST00000536011 MKI67P46013 3256 aaKnown RBP16.07■□□□□ 0.16
RTN3-207ENST00000536011 ZBTB7BO15156 539 aaPredicted RBP16.07■□□□□ 0.16
RTN3-207ENST00000536011 ZNF333Q96JL9 665 aa16.07■□□□□ 0.16
RTN3-207ENST00000536011 DBNDD2Q9BQY9 259 aa16.07■□□□□ 0.16
RTN3-207ENST00000536011 OSBPL5Q9H0X9 879 aaPredicted RBP16.07■□□□□ 0.16
RTN3-207ENST00000536011 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.07■□□□□ 0.16
RTN3-207ENST00000536011 CPA4Q9UI42 421 aa16.07■□□□□ 0.16
RTN3-207ENST00000536011 ADGRA2Q96PE1 1338 aa16.06■□□□□ 0.16
RTN3-207ENST00000536011 RLBP1P12271 317 aa16.06■□□□□ 0.16
RTN3-207ENST00000536011 CAP1Q01518 475 aa16.06■□□□□ 0.16
RTN3-207ENST00000536011 MOGSQ13724 837 aa16.06■□□□□ 0.16
RTN3-207ENST00000536011 GADL1Q6ZQY3 521 aa16.06■□□□□ 0.16
RTN3-207ENST00000536011 CERS3Q8IU89 383 aa16.06■□□□□ 0.16
RTN3-207ENST00000536011 DHX36Q9H2U1 1008 aaKnown RBP16.06■□□□□ 0.16
RTN3-207ENST00000536011 HERC5Q9UII4 1024 aaKnown RBP16.06■□□□□ 0.16
RTN3-207ENST00000536011 AFG3L2Q9Y4W6 797 aa16.06■□□□□ 0.16
RTN3-207ENST00000536011 POTEFA5A3E0 1075 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms