RNA–Protein interactions for RNA: ENST00000536000.1

VPS37C-203, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-203ENST00000536000 SH3RF3Q8TEJ3 882 aaPredicted RBP15.48■□□□□ 0.07
VPS37C-203ENST00000536000 GPATCH3Q96I76 525 aa15.48■□□□□ 0.07
VPS37C-203ENST00000536000 WNK4Q96J92 1243 aa15.48■□□□□ 0.07
VPS37C-203ENST00000536000 WRNIP1Q96S55 665 aa15.48■□□□□ 0.07
VPS37C-203ENST00000536000 ECHDC1Q9NTX5 307 aa15.48■□□□□ 0.07
VPS37C-203ENST00000536000 DDTLA6NHG4 134 aaPredicted RBP15.47■□□□□ 0.07
VPS37C-203ENST00000536000 TRPA1O75762 1119 aa15.47■□□□□ 0.07
VPS37C-203ENST00000536000 ZBTB48P10074 688 aaPredicted RBP15.47■□□□□ 0.07
VPS37C-203ENST00000536000 HSPA8P11142 646 aaKnown RBP15.47■□□□□ 0.07
VPS37C-203ENST00000536000 TM4SF4P48230 202 aa15.47■□□□□ 0.07
VPS37C-203ENST00000536000 INHBEP58166 350 aa15.47■□□□□ 0.07
VPS37C-203ENST00000536000 SREBF2Q12772 1141 aa15.47■□□□□ 0.07
VPS37C-203ENST00000536000 HDAC1Q13547 482 aaPredicted RBP15.47■□□□□ 0.07
VPS37C-203ENST00000536000 SLC9C2Q5TAH2 1124 aa15.47■□□□□ 0.07
VPS37C-203ENST00000536000 ADGRA1Q86SQ6 560 aa15.47■□□□□ 0.07
VPS37C-203ENST00000536000 GCC1Q96CN9 775 aa15.47■□□□□ 0.07
VPS37C-203ENST00000536000 HAUS7Q99871 368 aa15.47■□□□□ 0.07
VPS37C-203ENST00000536000 RWDD1Q9H446 243 aaPredicted RBP15.47■□□□□ 0.07
VPS37C-203ENST00000536000 PRDM10Q9NQV6 1147 aa15.47■□□□□ 0.07
VPS37C-203ENST00000536000 PAG1Q9NWQ8 432 aa15.47■□□□□ 0.07
VPS37C-203ENST00000536000 RNF186Q9NXI6 227 aa15.47■□□□□ 0.07
VPS37C-203ENST00000536000 MYO5AQ9Y4I1 1855 aaKnown RBP15.46■□□□□ 0.07
VPS37C-203ENST00000536000 MANSC4A6NHS7 340 aaPredicted RBP15.46■□□□□ 0.07
VPS37C-203ENST00000536000 DYNLL1P63167 89 aaKnown RBP15.46■□□□□ 0.07
VPS37C-203ENST00000536000 VGLL4Q14135 290 aa15.46■□□□□ 0.07
VPS37C-203ENST00000536000 ANKRD45Q5TZF3 282 aa15.46■□□□□ 0.07
VPS37C-203ENST00000536000 SH3BP5LQ7L8J4 393 aa15.46■□□□□ 0.07
VPS37C-203ENST00000536000 CERS3Q8IU89 383 aa15.46■□□□□ 0.07
VPS37C-203ENST00000536000 TGFBRAP1Q8WUH2 860 aa15.46■□□□□ 0.07
VPS37C-203ENST00000536000 ZKSCAN4Q969J2 545 aaPredicted RBP15.46■□□□□ 0.07
VPS37C-203ENST00000536000 OPTNQ96CV9 577 aa15.46■□□□□ 0.07
VPS37C-203ENST00000536000 EDC3Q96F86 508 aaKnown RBP15.46■□□□□ 0.07
VPS37C-203ENST00000536000 TSKSQ9UJT2 592 aa15.46■□□□□ 0.07
VPS37C-203ENST00000536000 ZNF112Q9UJU3 913 aa15.46■□□□□ 0.07
VPS37C-203ENST00000536000 COL13A1Q5TAT6 717 aaPredicted RBP15.45■□□□□ 0.06
VPS37C-203ENST00000536000 MIGA1Q8NAN2 632 aa15.45■□□□□ 0.06
VPS37C-203ENST00000536000 OSBPL5Q9H0X9 879 aaPredicted RBP15.45■□□□□ 0.06
VPS37C-203ENST00000536000 THSD7BQ9C0I4 1608 aa15.44■□□□□ 0.06
VPS37C-203ENST00000536000 PDE6AP16499 860 aa15.44■□□□□ 0.06
VPS37C-203ENST00000536000 INPP5BP32019 993 aa15.44■□□□□ 0.06
VPS37C-203ENST00000536000 GJA5P36382 358 aa15.44■□□□□ 0.06
VPS37C-203ENST00000536000 USP5P45974 858 aa15.44■□□□□ 0.06
VPS37C-203ENST00000536000 MAP3K10Q02779 954 aa15.44■□□□□ 0.06
VPS37C-203ENST00000536000 ERO1BQ86YB8 467 aa15.44■□□□□ 0.06
VPS37C-203ENST00000536000 MAPKAPK5Q8IW41 473 aa15.44■□□□□ 0.06
VPS37C-203ENST00000536000 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.44■□□□□ 0.06
VPS37C-203ENST00000536000 DHX36Q9H2U1 1008 aaKnown RBP15.44■□□□□ 0.06
VPS37C-203ENST00000536000 SAGE1Q9NXZ1 904 aa15.44■□□□□ 0.06
VPS37C-203ENST00000536000 MAGEB6P1A0A0J9YX57 407 aa15.43■□□□□ 0.06
VPS37C-203ENST00000536000 TBC1D12O60347 775 aa15.43■□□□□ 0.06
VPS37C-203ENST00000536000 OTUD7BQ6GQQ9 843 aa15.43■□□□□ 0.06
VPS37C-203ENST00000536000 CNKSR2Q8WXI2 1034 aa15.43■□□□□ 0.06
VPS37C-203ENST00000536000 OTUD5Q96G74 571 aa15.43■□□□□ 0.06
VPS37C-203ENST00000536000 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.43■□□□□ 0.06
VPS37C-203ENST00000536000 PI4KBQ9UBF8 816 aa15.43■□□□□ 0.06
VPS37C-203ENST00000536000 SNCAIPQ9Y6H5 919 aa15.43■□□□□ 0.06
VPS37C-203ENST00000536000 RFX7Q2KHR2 1363 aa15.43■□□□□ 0.06
VPS37C-203ENST00000536000 ZNF532Q9HCE3 1301 aa15.43■□□□□ 0.06
VPS37C-203ENST00000536000 SPDYE5A6NIY4 337 aa15.42■□□□□ 0.06
VPS37C-203ENST00000536000 ERC2O15083 957 aa15.42■□□□□ 0.06
VPS37C-203ENST00000536000 ALDH1A1P00352 501 aa15.42■□□□□ 0.06
VPS37C-203ENST00000536000 GTF2A2P52657 109 aa15.42■□□□□ 0.06
VPS37C-203ENST00000536000 ZSCAN25Q6NSZ9 544 aa15.42■□□□□ 0.06
VPS37C-203ENST00000536000 FOXP4Q8IVH2 680 aaPredicted RBP15.42■□□□□ 0.06
VPS37C-203ENST00000536000 TTC41PQ6P2S7 1318 aa15.42■□□□□ 0.06
VPS37C-203ENST00000536000 ATRNL1Q5VV63 1379 aa15.41■□□□□ 0.06
VPS37C-203ENST00000536000 PHF20L1A8MW92 1017 aa15.41■□□□□ 0.06
VPS37C-203ENST00000536000 SLURP2P0DP57 97 aa15.41■□□□□ 0.06
VPS37C-203ENST00000536000 ADD2P35612 726 aa15.41■□□□□ 0.06
VPS37C-203ENST00000536000 IRX6P78412 446 aaPredicted RBP15.41■□□□□ 0.06
VPS37C-203ENST00000536000 PPATQ06203 517 aa15.41■□□□□ 0.06
VPS37C-203ENST00000536000 NOL9Q5SY16 702 aaKnown RBP15.41■□□□□ 0.06
VPS37C-203ENST00000536000 TSHZ3Q63HK5 1081 aa15.41■□□□□ 0.06
VPS37C-203ENST00000536000 IFNL1Q8IU54 200 aa15.41■□□□□ 0.06
VPS37C-203ENST00000536000 TCRBV5S4A2TA0A5A2 114 aa15.4■□□□□ 0.06
VPS37C-203ENST00000536000 TESPA1A2RU30 521 aaPredicted RBP15.4■□□□□ 0.06
VPS37C-203ENST00000536000 CTNND1O60716 968 aaKnown RBP15.4■□□□□ 0.06
VPS37C-203ENST00000536000 GLRX3O76003 335 aaKnown RBP15.4■□□□□ 0.06
VPS37C-203ENST00000536000 TBC1D8O95759 1140 aa15.4■□□□□ 0.06
VPS37C-203ENST00000536000 IGHDP01880 384 aa15.4■□□□□ 0.06
VPS37C-203ENST00000536000 PPIL2Q13356 520 aa15.4■□□□□ 0.06
VPS37C-203ENST00000536000 UBE3CQ15386 1083 aa15.4■□□□□ 0.06
VPS37C-203ENST00000536000 SCYL3Q8IZE3 742 aa15.4■□□□□ 0.06
VPS37C-203ENST00000536000 OTUD7AQ8TE49 926 aaPredicted RBP15.4■□□□□ 0.06
VPS37C-203ENST00000536000 MS4A4AQ96JQ5 239 aa15.4■□□□□ 0.06
VPS37C-203ENST00000536000 RIOK1Q9BRS2 568 aaKnown RBP15.4■□□□□ 0.06
VPS37C-203ENST00000536000 CRNKL1Q9BZJ0 848 aaKnown RBP15.4■□□□□ 0.06
VPS37C-203ENST00000536000 PICK1Q9NRD5 415 aa15.4■□□□□ 0.06
VPS37C-203ENST00000536000 SAP30BPQ9UHR5 308 aaKnown RBP15.4■□□□□ 0.06
VPS37C-203ENST00000536000 HERC5Q9UII4 1024 aaKnown RBP15.4■□□□□ 0.06
VPS37C-203ENST00000536000 PALD1Q9ULE6 856 aa15.4■□□□□ 0.06
VPS37C-203ENST00000536000 FLT1P17948 1338 aa15.4■□□□□ 0.06
VPS37C-203ENST00000536000 CCL15-CCL14A0A0B4J2E2 113 aa15.39■□□□□ 0.05
VPS37C-203ENST00000536000 FAM196BA6NMK8 535 aa15.39■□□□□ 0.05
VPS37C-203ENST00000536000 IRF6O14896 467 aa15.39■□□□□ 0.05
VPS37C-203ENST00000536000 HLA-DOAP06340 250 aa15.39■□□□□ 0.05
VPS37C-203ENST00000536000 CETPP11597 493 aa15.39■□□□□ 0.05
VPS37C-203ENST00000536000 MX1P20591 662 aa15.39■□□□□ 0.05
VPS37C-203ENST00000536000 CCL15Q16663 113 aa15.39■□□□□ 0.05
VPS37C-203ENST00000536000 B4GALNT3Q6L9W6 998 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms