RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 SLC12A7Q9Y666 1083 aa15.56■□□□□ 0.08
VPS33B-202ENST00000535906 CCDC69A6NI79 296 aa15.56■□□□□ 0.08
VPS33B-202ENST00000535906 UBE2Q2LH0YL09 131 aa15.56■□□□□ 0.08
VPS33B-202ENST00000535906 LUZP1Q86V48 1076 aa15.56■□□□□ 0.08
VPS33B-202ENST00000535906 GJD4Q96KN9 370 aaPredicted RBP15.56■□□□□ 0.08
VPS33B-202ENST00000535906 ZNF830Q96NB3 372 aaPredicted RBP15.56■□□□□ 0.08
VPS33B-202ENST00000535906 TAOK2Q9UL54 1235 aa15.56■□□□□ 0.08
VPS33B-202ENST00000535906 MINDY4BA8MYZ0 360 aa15.55■□□□□ 0.08
VPS33B-202ENST00000535906 DYNLL1P63167 89 aaKnown RBP15.55■□□□□ 0.08
VPS33B-202ENST00000535906 HSP90AA2PQ14568 343 aaPredicted RBP15.55■□□□□ 0.08
VPS33B-202ENST00000535906 CPLX2Q6PUV4 134 aaKnown RBP15.55■□□□□ 0.08
VPS33B-202ENST00000535906 TTC12Q9H892 705 aaPredicted RBP15.55■□□□□ 0.08
VPS33B-202ENST00000535906 POLR3EQ9NVU0 708 aa15.55■□□□□ 0.08
VPS33B-202ENST00000535906 TFCP2L1Q9NZI6 479 aa15.55■□□□□ 0.08
VPS33B-202ENST00000535906 LY75O60449 1722 aa15.55■□□□□ 0.08
VPS33B-202ENST00000535906 IARSP41252 1262 aaKnown RBP15.55■□□□□ 0.08
VPS33B-202ENST00000535906 ADALQ6DHV7 355 aa15.55■□□□□ 0.08
VPS33B-202ENST00000535906 SASS6Q6UVJ0 657 aa15.55■□□□□ 0.08
VPS33B-202ENST00000535906 CCDC73Q6ZRK6 1079 aa15.55■□□□□ 0.08
VPS33B-202ENST00000535906 FSIP1Q8NA03 581 aa15.55■□□□□ 0.08
VPS33B-202ENST00000535906 CBX8Q9HC52 389 aa15.55■□□□□ 0.08
VPS33B-202ENST00000535906 FAM160A1Q05DH4 1040 aa15.54■□□□□ 0.08
VPS33B-202ENST00000535906 KRT40Q6A162 431 aa15.54■□□□□ 0.08
VPS33B-202ENST00000535906 RGS22Q8NE09 1264 aa15.54■□□□□ 0.08
VPS33B-202ENST00000535906 ECM29Q5VYK3 1845 aa15.54■□□□□ 0.08
VPS33B-202ENST00000535906 TPM3P06753 285 aa15.54■□□□□ 0.08
VPS33B-202ENST00000535906 RFC4P35249 363 aa15.54■□□□□ 0.08
VPS33B-202ENST00000535906 WTAPQ15007 396 aa15.54■□□□□ 0.08
VPS33B-202ENST00000535906 STK38Q15208 465 aa15.54■□□□□ 0.08
VPS33B-202ENST00000535906 RNF41Q9H4P4 317 aaPredicted RBP15.54■□□□□ 0.08
VPS33B-202ENST00000535906 SBF2Q86WG5 1849 aa15.53■□□□□ 0.08
VPS33B-202ENST00000535906 BAZ2AQ9UIF9 1905 aaKnown RBP15.53■□□□□ 0.08
VPS33B-202ENST00000535906 YEATS4O95619 227 aa15.53■□□□□ 0.08
VPS33B-202ENST00000535906 HIBADHP31937 336 aaKnown RBP15.53■□□□□ 0.08
VPS33B-202ENST00000535906 NOLC1Q14978 699 aaKnown RBP eCLIP15.53■□□□□ 0.08
VPS33B-202ENST00000535906 SART3Q15020 963 aaKnown RBP15.53■□□□□ 0.08
VPS33B-202ENST00000535906 SYNE3Q6ZMZ3 975 aa15.53■□□□□ 0.08
VPS33B-202ENST00000535906 TXNRD3Q86VQ6 643 aa15.53■□□□□ 0.08
VPS33B-202ENST00000535906 NSUN4Q96CB9 384 aaKnown RBP15.53■□□□□ 0.08
VPS33B-202ENST00000535906 ANKRD2Q9GZV1 360 aa15.53■□□□□ 0.08
VPS33B-202ENST00000535906 DNAJC25Q9H1X3 360 aa15.53■□□□□ 0.08
VPS33B-202ENST00000535906 ANAPC4Q9UJX5 808 aa15.53■□□□□ 0.08
VPS33B-202ENST00000535906 A0A1B0GVL5 298 aa15.53■□□□□ 0.08
VPS33B-202ENST00000535906 SEMA3EO15041 775 aa15.53■□□□□ 0.08
VPS33B-202ENST00000535906 SPTLC2O15270 562 aa15.53■□□□□ 0.08
VPS33B-202ENST00000535906 SF3A1Q15459 793 aaKnown RBP15.53■□□□□ 0.08
VPS33B-202ENST00000535906 TRAPPC3LQ5T215 181 aa15.53■□□□□ 0.08
VPS33B-202ENST00000535906 FAM196AQ6ZSG2 479 aa15.53■□□□□ 0.08
VPS33B-202ENST00000535906 SLC51AQ86UW1 340 aa15.53■□□□□ 0.08
VPS33B-202ENST00000535906 KCNG4Q8TDN1 519 aa15.53■□□□□ 0.08
VPS33B-202ENST00000535906 MRPS27Q92552 414 aaKnown RBP15.53■□□□□ 0.08
VPS33B-202ENST00000535906 SLC26A6Q9BXS9 759 aa15.53■□□□□ 0.08
VPS33B-202ENST00000535906 CYP2D7A0A087X1C5 515 aa15.52■□□□□ 0.08
VPS33B-202ENST00000535906 UQCRHLA0A096LP55 91 aa15.52■□□□□ 0.08
VPS33B-202ENST00000535906 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.52■□□□□ 0.08
VPS33B-202ENST00000535906 NPHP1O15259 732 aa15.52■□□□□ 0.08
VPS33B-202ENST00000535906 KINO60870 393 aaKnown RBP15.52■□□□□ 0.08
VPS33B-202ENST00000535906 UQCRHP07919 91 aa15.52■□□□□ 0.08
VPS33B-202ENST00000535906 MECOMQ03112 1051 aa15.52■□□□□ 0.08
VPS33B-202ENST00000535906 ANO1Q5XXA6 986 aa15.52■□□□□ 0.08
VPS33B-202ENST00000535906 FMR1NBQ8N0W7 255 aaPredicted RBP15.52■□□□□ 0.08
VPS33B-202ENST00000535906 LRRC4BQ9NT99 713 aa15.52■□□□□ 0.08
VPS33B-202ENST00000535906 NID2Q14112 1375 aa15.52■□□□□ 0.07
VPS33B-202ENST00000535906 MYH13Q9UKX3 1938 aa15.52■□□□□ 0.07
VPS33B-202ENST00000535906 TNRC6CQ9HCJ0 1690 aaKnown RBP15.52■□□□□ 0.07
VPS33B-202ENST00000535906 A0A1W2PQ27 194 aa15.52■□□□□ 0.07
VPS33B-202ENST00000535906 A0A1W2PQ64 194 aa15.52■□□□□ 0.07
VPS33B-202ENST00000535906 A0A1W2PQD8 194 aa15.52■□□□□ 0.07
VPS33B-202ENST00000535906 ERICH2A1L162 156 aa15.52■□□□□ 0.07
VPS33B-202ENST00000535906 GOLGA6L6A8MZA4 724 aa15.52■□□□□ 0.07
VPS33B-202ENST00000535906 CTAGE5O15320 804 aa15.52■□□□□ 0.07
VPS33B-202ENST00000535906 IFNAR1P17181 557 aa15.52■□□□□ 0.07
VPS33B-202ENST00000535906 GUCY1A2P33402 732 aa15.52■□□□□ 0.07
VPS33B-202ENST00000535906 ZNF165P49910 485 aa15.52■□□□□ 0.07
VPS33B-202ENST00000535906 SSRP1Q08945 709 aaKnown RBP15.52■□□□□ 0.07
VPS33B-202ENST00000535906 MEX3CQ5U5Q3 659 aaKnown RBP15.52■□□□□ 0.07
VPS33B-202ENST00000535906 MTA3Q9BTC8 594 aa15.52■□□□□ 0.07
VPS33B-202ENST00000535906 FMNL1O95466 1100 aaPredicted RBP15.51■□□□□ 0.07
VPS33B-202ENST00000535906 PRDX5P30044 214 aa15.51■□□□□ 0.07
VPS33B-202ENST00000535906 NDUFA8P51970 172 aa15.51■□□□□ 0.07
VPS33B-202ENST00000535906 NFIXQ14938 502 aa15.51■□□□□ 0.07
VPS33B-202ENST00000535906 BRIP1Q9BX63 1249 aa15.51■□□□□ 0.07
VPS33B-202ENST00000535906 SPTLC3Q9NUV7 552 aa15.51■□□□□ 0.07
VPS33B-202ENST00000535906 AFF2P51816 1311 aa15.51■□□□□ 0.07
VPS33B-202ENST00000535906 STK36Q9NRP7 1315 aa15.51■□□□□ 0.07
VPS33B-202ENST00000535906 CHAF1AQ13111 956 aaPredicted RBP15.51■□□□□ 0.07
VPS33B-202ENST00000535906 RTN1Q16799 776 aa15.51■□□□□ 0.07
VPS33B-202ENST00000535906 CMTR1Q8N1G2 835 aaKnown RBP15.51■□□□□ 0.07
VPS33B-202ENST00000535906 TMTC2Q8N394 836 aa15.51■□□□□ 0.07
VPS33B-202ENST00000535906 CCDC82Q8N4S0 544 aa15.51■□□□□ 0.07
VPS33B-202ENST00000535906 ESR2Q92731 530 aa15.51■□□□□ 0.07
VPS33B-202ENST00000535906 UBAC1Q9BSL1 405 aa15.51■□□□□ 0.07
VPS33B-202ENST00000535906 JAG2Q9Y219 1238 aa15.51■□□□□ 0.07
VPS33B-202ENST00000535906 MYH2Q9UKX2 1941 aa15.5■□□□□ 0.07
VPS33B-202ENST00000535906 PDS5AQ29RF7 1337 aaKnown RBP15.5■□□□□ 0.07
VPS33B-202ENST00000535906 IRS2Q9Y4H2 1338 aa15.5■□□□□ 0.07
VPS33B-202ENST00000535906 ONECUT3O60422 494 aaPredicted RBP15.5■□□□□ 0.07
VPS33B-202ENST00000535906 CAVIN2O95810 425 aa15.5■□□□□ 0.07
VPS33B-202ENST00000535906 U2AF2P26368 475 aaKnown RBP eCLIP15.5■□□□□ 0.07
VPS33B-202ENST00000535906 SEC23AQ15436 765 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms