RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 GUCA1BQ9UMX6 200 aa18.14■□□□□ 0.5
MCF2L-232ENST00000535094 TADA3O75528 432 aa18.14■□□□□ 0.49
MCF2L-232ENST00000535094 ZFYP08048 801 aaPredicted RBP18.14■□□□□ 0.49
MCF2L-232ENST00000535094 NR5A1Q13285 461 aa18.14■□□□□ 0.49
MCF2L-232ENST00000535094 PLEKHA4Q9H4M7 779 aa18.14■□□□□ 0.49
MCF2L-232ENST00000535094 GOLGA6L9A6NEM1 432 aa18.14■□□□□ 0.49
MCF2L-232ENST00000535094 H2AFXP16104 143 aaPredicted RBP18.14■□□□□ 0.49
MCF2L-232ENST00000535094 NCAPHQ15003 741 aa18.14■□□□□ 0.49
MCF2L-232ENST00000535094 FKBP15Q5T1M5 1219 aa18.14■□□□□ 0.49
MCF2L-232ENST00000535094 KIF6Q6ZMV9 814 aa18.14■□□□□ 0.49
MCF2L-232ENST00000535094 ATG9AQ7Z3C6 839 aa18.13■□□□□ 0.49
MCF2L-232ENST00000535094 L2HGDHQ9H9P8 463 aa18.13■□□□□ 0.49
MCF2L-232ENST00000535094 LONRF2Q1L5Z9 754 aa18.13■□□□□ 0.49
MCF2L-232ENST00000535094 NUTM2AQ8IVF1 878 aaPredicted RBP18.13■□□□□ 0.49
MCF2L-232ENST00000535094 PRDM11Q9NQV5 511 aa18.13■□□□□ 0.49
MCF2L-232ENST00000535094 TECPR2O15040 1411 aa18.13■□□□□ 0.49
MCF2L-232ENST00000535094 SNAP23O00161 211 aa18.13■□□□□ 0.49
MCF2L-232ENST00000535094 IKBKBO14920 756 aa18.13■□□□□ 0.49
MCF2L-232ENST00000535094 CDC27P30260 824 aa18.13■□□□□ 0.49
MCF2L-232ENST00000535094 CC2D1AQ6P1N0 951 aaPredicted RBP18.13■□□□□ 0.49
MCF2L-232ENST00000535094 GPR161Q8N6U8 529 aaKnown RBP18.13■□□□□ 0.49
MCF2L-232ENST00000535094 PHLPP2Q6ZVD8 1323 aa18.13■□□□□ 0.49
MCF2L-232ENST00000535094 IPO7O95373 1038 aaKnown RBP18.12■□□□□ 0.49
MCF2L-232ENST00000535094 TFRCP02786 760 aaKnown RBP18.12■□□□□ 0.49
MCF2L-232ENST00000535094 RTN1Q16799 776 aa18.12■□□□□ 0.49
MCF2L-232ENST00000535094 APOA5Q6Q788 366 aa18.12■□□□□ 0.49
MCF2L-232ENST00000535094 PRR29P0C7W0 189 aa18.12■□□□□ 0.49
MCF2L-232ENST00000535094 MFSD6Q6ZSS7 791 aa18.12■□□□□ 0.49
MCF2L-232ENST00000535094 LRP2BPQ9P2M1 347 aa18.12■□□□□ 0.49
MCF2L-232ENST00000535094 CUTAO60888 179 aa18.12■□□□□ 0.49
MCF2L-232ENST00000535094 TUBB4AP04350 444 aa18.12■□□□□ 0.49
MCF2L-232ENST00000535094 GTF2E1P29083 439 aaPredicted RBP18.12■□□□□ 0.49
MCF2L-232ENST00000535094 GRIN1Q05586 938 aa18.12■□□□□ 0.49
MCF2L-232ENST00000535094 METTL16Q86W50 562 aaKnown RBP18.12■□□□□ 0.49
MCF2L-232ENST00000535094 DCAF5Q96JK2 942 aa18.12■□□□□ 0.49
MCF2L-232ENST00000535094 PARP3Q9Y6F1 533 aa18.12■□□□□ 0.49
MCF2L-232ENST00000535094 CYP2C19P33261 490 aa18.11■□□□□ 0.49
MCF2L-232ENST00000535094 CYB5R4Q7L1T6 521 aa18.11■□□□□ 0.49
MCF2L-232ENST00000535094 ARMT1Q9H993 441 aa18.11■□□□□ 0.49
MCF2L-232ENST00000535094 SUGCTQ9HAC7 445 aa18.11■□□□□ 0.49
MCF2L-232ENST00000535094 ZNF532Q9HCE3 1301 aa18.11■□□□□ 0.49
MCF2L-232ENST00000535094 CTAGE9A4FU28 777 aa18.11■□□□□ 0.49
MCF2L-232ENST00000535094 PPARDQ03181 441 aa18.11■□□□□ 0.49
MCF2L-232ENST00000535094 RAD51AP2Q09MP3 1159 aa18.11■□□□□ 0.49
MCF2L-232ENST00000535094 CTAGE15A4D2H0 777 aa18.11■□□□□ 0.49
MCF2L-232ENST00000535094 VWA3AA6NCI4 1184 aa18.11■□□□□ 0.49
MCF2L-232ENST00000535094 TEX33O43247 280 aa18.11■□□□□ 0.49
MCF2L-232ENST00000535094 RANBP6O60518 1105 aaKnown RBP18.11■□□□□ 0.49
MCF2L-232ENST00000535094 MBD4O95243 580 aa18.11■□□□□ 0.49
MCF2L-232ENST00000535094 CTAGE8P0CG41 777 aa18.11■□□□□ 0.49
MCF2L-232ENST00000535094 DNA2P51530 1060 aa18.11■□□□□ 0.49
MCF2L-232ENST00000535094 WTAPQ15007 396 aa18.11■□□□□ 0.49
MCF2L-232ENST00000535094 CTAGE6Q86UF2 777 aa18.11■□□□□ 0.49
MCF2L-232ENST00000535094 CTAGE4Q8IX94 777 aa18.11■□□□□ 0.49
MCF2L-232ENST00000535094 MAGEB6Q8N7X4 407 aa18.11■□□□□ 0.49
MCF2L-232ENST00000535094 CDC5LQ99459 802 aaKnown RBP18.11■□□□□ 0.49
MCF2L-232ENST00000535094 SLF1Q9BQI6 1058 aa18.11■□□□□ 0.49
MCF2L-232ENST00000535094 BLZF1Q9H2G9 400 aa18.11■□□□□ 0.49
MCF2L-232ENST00000535094 TMEM51Q9NW97 253 aa18.11■□□□□ 0.49
MCF2L-232ENST00000535094 TRMT112Q9UI30 125 aaKnown RBP18.11■□□□□ 0.49
MCF2L-232ENST00000535094 MAN1B1Q9UKM7 699 aa18.11■□□□□ 0.49
MCF2L-232ENST00000535094 XBP1P17861 261 aa18.1■□□□□ 0.49
MCF2L-232ENST00000535094 MATR3P43243 847 aaKnown RBP eCLIP18.1■□□□□ 0.49
MCF2L-232ENST00000535094 ANTXR2P58335 489 aa18.1■□□□□ 0.49
MCF2L-232ENST00000535094 FMR1Q06787 632 aaKnown RBP eCLIP18.1■□□□□ 0.49
MCF2L-232ENST00000535094 ZNF174Q15697 407 aa18.1■□□□□ 0.49
MCF2L-232ENST00000535094 RRAGBQ5VZM2 374 aa18.1■□□□□ 0.49
MCF2L-232ENST00000535094 C3P01024 1663 aa18.1■□□□□ 0.49
MCF2L-232ENST00000535094 TBC1D10CQ8IV04 446 aa18.1■□□□□ 0.49
MCF2L-232ENST00000535094 PLIN2Q99541 437 aa18.1■□□□□ 0.49
MCF2L-232ENST00000535094 HPS5Q9UPZ3 1129 aa18.1■□□□□ 0.49
MCF2L-232ENST00000535094 TRIM66O15016 1216 aa18.1■□□□□ 0.49
MCF2L-232ENST00000535094 USP49Q70CQ1 688 aa18.1■□□□□ 0.49
MCF2L-232ENST00000535094 REXO1L1PQ8IX06 675 aa18.1■□□□□ 0.49
MCF2L-232ENST00000535094 ACRBPQ8NEB7 543 aa18.1■□□□□ 0.49
MCF2L-232ENST00000535094 DRC1Q96MC2 740 aa18.1■□□□□ 0.49
MCF2L-232ENST00000535094 C19orf44Q9H6X5 657 aa18.1■□□□□ 0.49
MCF2L-232ENST00000535094 WASF1Q92558 559 aa18.09■□□□□ 0.49
MCF2L-232ENST00000535094 ADAM21Q9UKJ8 722 aa18.09■□□□□ 0.49
MCF2L-232ENST00000535094 PXDNQ92626 1479 aa18.09■□□□□ 0.49
MCF2L-232ENST00000535094 FOXO4P98177 505 aa18.09■□□□□ 0.49
MCF2L-232ENST00000535094 KIAA1328Q86T90 577 aa18.09■□□□□ 0.49
MCF2L-232ENST00000535094 NACAP1Q9BZK3 213 aa18.09■□□□□ 0.49
MCF2L-232ENST00000535094 ACBD3Q9H3P7 528 aa18.09■□□□□ 0.49
MCF2L-232ENST00000535094 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.09■□□□□ 0.49
MCF2L-232ENST00000535094 PRDM1O75626 825 aa18.09■□□□□ 0.49
MCF2L-232ENST00000535094 ZMYND10O75800 440 aa18.09■□□□□ 0.49
MCF2L-232ENST00000535094 SASH3O75995 380 aa18.09■□□□□ 0.49
MCF2L-232ENST00000535094 NAP1L1P55209 391 aaKnown RBP18.09■□□□□ 0.49
MCF2L-232ENST00000535094 RBL2Q08999 1139 aa18.09■□□□□ 0.49
MCF2L-232ENST00000535094 NOSTRINQ8IVI9 506 aa18.09■□□□□ 0.49
MCF2L-232ENST00000535094 MB21D2Q8IYB1 491 aaPredicted RBP18.09■□□□□ 0.49
MCF2L-232ENST00000535094 RGS22Q8NE09 1264 aa18.09■□□□□ 0.49
MCF2L-232ENST00000535094 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.09■□□□□ 0.49
MCF2L-232ENST00000535094 PCDHB6Q9Y5E3 794 aa18.09■□□□□ 0.49
MCF2L-232ENST00000535094 UTYO14607 1347 aa18.08■□□□□ 0.49
MCF2L-232ENST00000535094 CYP27B1O15528 508 aa18.08■□□□□ 0.49
MCF2L-232ENST00000535094 FOXP4Q8IVH2 680 aaPredicted RBP18.08■□□□□ 0.49
MCF2L-232ENST00000535094 RASSF4Q9H2L5 321 aa18.08■□□□□ 0.49
MCF2L-232ENST00000535094 VPS54Q9P1Q0 977 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms