RNA–Protein interactions for RNA: ENST00000534610.5

ATG13-222, Transcript of autophagy related 13, human

TSL 5

Gene ATG13, Length 1,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG13-222	ENST00000534610	SOGA3	Q5TF21	947 aa		18.08	■□□□□ 0.48
ATG13-222	ENST00000534610	GTF3C6	Q969F1	213 aa		18.08	■□□□□ 0.48
ATG13-222	ENST00000534610	ERICH2	A1L162	156 aa		18.07	■□□□□ 0.48
ATG13-222	ENST00000534610	DDX11L8	A8MPP1	907 aa		18.07	■□□□□ 0.48
ATG13-222	ENST00000534610	DHX16	O60231	1041 aa	Known RBP	18.07	■□□□□ 0.48
ATG13-222	ENST00000534610	MCM4	P33991	863 aa		18.07	■□□□□ 0.48
ATG13-222	ENST00000534610	DIXDC1	Q155Q3	683 aa		18.07	■□□□□ 0.48
ATG13-222	ENST00000534610	SBK1	Q52WX2	424 aa		18.07	■□□□□ 0.48
ATG13-222	ENST00000534610	LLPH	Q9BRT6	129 aa	Known RBP	18.07	■□□□□ 0.48
ATG13-222	ENST00000534610	MTA3	Q9BTC8	594 aa		18.07	■□□□□ 0.48
ATG13-222	ENST00000534610	DCP1A	Q9NPI6	582 aa	Predicted RBP	18.07	■□□□□ 0.48
ATG13-222	ENST00000534610	GPR75-ASB3	A0A0A6YYF3	556 aa		18.06	■□□□□ 0.48
ATG13-222	ENST00000534610	USP17L12	C9JPN9	530 aa		18.06	■□□□□ 0.48
ATG13-222	ENST00000534610	USP17L21	D6R901	530 aa		18.06	■□□□□ 0.48
ATG13-222	ENST00000534610	BTD	P43251	543 aa		18.06	■□□□□ 0.48
ATG13-222	ENST00000534610	EVC	P57679	992 aa		18.06	■□□□□ 0.48
ATG13-222	ENST00000534610	GRIK5	Q16478	980 aa		18.06	■□□□□ 0.48
ATG13-222	ENST00000534610	RRP12	Q5JTH9	1297 aa	Known RBP	18.06	■□□□□ 0.48
ATG13-222	ENST00000534610	CTR9	Q6PD62	1173 aa		18.06	■□□□□ 0.48
ATG13-222	ENST00000534610	ESR2	Q92731	530 aa		18.06	■□□□□ 0.48
ATG13-222	ENST00000534610	ANGEL1	Q9UNK9	670 aa	Known RBP	18.06	■□□□□ 0.48
ATG13-222	ENST00000534610	KIF3A	Q9Y496	699 aa		18.06	■□□□□ 0.48
ATG13-222	ENST00000534610	TIAM2	Q8IVF5	1701 aa		18.06	■□□□□ 0.48
ATG13-222	ENST00000534610	KDM4A	O75164	1064 aa		18.06	■□□□□ 0.48
ATG13-222	ENST00000534610	BRD1	O95696	1058 aa		18.06	■□□□□ 0.48
ATG13-222	ENST00000534610	ANTXR2	P58335	489 aa		18.06	■□□□□ 0.48
ATG13-222	ENST00000534610	C1QTNF8	P60827	252 aa		18.06	■□□□□ 0.48
ATG13-222	ENST00000534610	FKBP1A	P62942	108 aa	Known RBP	18.06	■□□□□ 0.48
ATG13-222	ENST00000534610	RASSF7	Q02833	373 aa		18.06	■□□□□ 0.48
ATG13-222	ENST00000534610	TMTC2	Q8N394	836 aa		18.06	■□□□□ 0.48
ATG13-222	ENST00000534610	DBNDD1	Q9H9R9	158 aa		18.06	■□□□□ 0.48
ATG13-222	ENST00000534610	NEDD4	P46934	1319 aa		18.06	■□□□□ 0.48
ATG13-222	ENST00000534610	ECE2	O60344	883 aa		18.05	■□□□□ 0.48
ATG13-222	ENST00000534610	PDIA3	P30101	505 aa	Known RBP	18.05	■□□□□ 0.48
ATG13-222	ENST00000534610	NT5C2	P49902	561 aa		18.05	■□□□□ 0.48
ATG13-222	ENST00000534610	KIAA2012	Q0VF49	1180 aa		18.05	■□□□□ 0.48
ATG13-222	ENST00000534610	STRIP1	Q5VSL9	837 aa		18.05	■□□□□ 0.48
ATG13-222	ENST00000534610	SYNE3	Q6ZMZ3	975 aa		18.05	■□□□□ 0.48
ATG13-222	ENST00000534610	NFXL1	Q6ZNB6	911 aa		18.05	■□□□□ 0.48
ATG13-222	ENST00000534610	CLEC17A	Q6ZS10	378 aa		18.05	■□□□□ 0.48
ATG13-222	ENST00000534610	CYB5R4	Q7L1T6	521 aa		18.05	■□□□□ 0.48
ATG13-222	ENST00000534610	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	18.05	■□□□□ 0.48
ATG13-222	ENST00000534610	MCM9	Q9NXL9	1143 aa		18.05	■□□□□ 0.48
ATG13-222	ENST00000534610	ZSWIM5	Q9P217	1185 aa		18.05	■□□□□ 0.48
ATG13-222	ENST00000534610	KLF18	A0A0U1RQI7	1052 aa		18.04	■□□□□ 0.48
ATG13-222	ENST00000534610	IFIT3	O14879	490 aa	Known RBP	18.04	■□□□□ 0.48
ATG13-222	ENST00000534610	STX6	O43752	255 aa		18.04	■□□□□ 0.48
ATG13-222	ENST00000534610	PDE4B	Q07343	736 aa		18.04	■□□□□ 0.48
ATG13-222	ENST00000534610	TMEM67	Q5HYA8	995 aa		18.04	■□□□□ 0.48
ATG13-222	ENST00000534610	C9orf131	Q5VYM1	1079 aa		18.04	■□□□□ 0.48
ATG13-222	ENST00000534610	TEX11	Q8IYF3	940 aa		18.04	■□□□□ 0.48
ATG13-222	ENST00000534610	VPS33B	Q9H267	617 aa		18.04	■□□□□ 0.48
ATG13-222	ENST00000534610	TTF2	Q9UNY4	1162 aa	Known RBP	18.04	■□□□□ 0.48
ATG13-222	ENST00000534610	DICER1	Q9UPY3	1922 aa	Known RBP	18.04	■□□□□ 0.48
ATG13-222	ENST00000534610	LAMA4	Q16363	1823 aa		18.04	■□□□□ 0.48
ATG13-222	ENST00000534610	GAK	O14976	1311 aa		18.03	■□□□□ 0.48
ATG13-222	ENST00000534610	USP17L3	A6NCW0	530 aa		18.03	■□□□□ 0.48
ATG13-222	ENST00000534610	USP17L4	A6NCW7	530 aa		18.03	■□□□□ 0.48
ATG13-222	ENST00000534610	SH2B2	O14492	632 aa	Predicted RBP	18.03	■□□□□ 0.48
ATG13-222	ENST00000534610	PPIP5K2	O43314	1243 aa		18.03	■□□□□ 0.48
ATG13-222	ENST00000534610	HMGN5	P82970	282 aa	Known RBP	18.03	■□□□□ 0.48
ATG13-222	ENST00000534610	SCRN1	Q12765	414 aa		18.03	■□□□□ 0.48
ATG13-222	ENST00000534610	AOC3	Q16853	763 aa		18.03	■□□□□ 0.48
ATG13-222	ENST00000534610	LARP1B	Q659C4	914 aa	Known RBP	18.03	■□□□□ 0.48
ATG13-222	ENST00000534610	USP17L1	Q7RTZ2	530 aa		18.03	■□□□□ 0.48
ATG13-222	ENST00000534610	STK11IP	Q8N1F8	1099 aa		18.03	■□□□□ 0.48
ATG13-222	ENST00000534610	FAM184A	Q8NB25	1140 aa		18.03	■□□□□ 0.48
ATG13-222	ENST00000534610	PSMD1	Q99460	953 aa		18.03	■□□□□ 0.48
ATG13-222	ENST00000534610	UBAC1	Q9BSL1	405 aa		18.03	■□□□□ 0.48
ATG13-222	ENST00000534610	ATP6V1D	Q9Y5K8	247 aa		18.03	■□□□□ 0.48
ATG13-222	ENST00000534610	CCDC69	A6NI79	296 aa		18.03	■□□□□ 0.48
ATG13-222	ENST00000534610	NFKBIE	O00221	500 aa		18.03	■□□□□ 0.48
ATG13-222	ENST00000534610	SYT1	P21579	422 aa		18.03	■□□□□ 0.48
ATG13-222	ENST00000534610	LIFR	P42702	1097 aa		18.03	■□□□□ 0.48
ATG13-222	ENST00000534610	ST3GAL1	Q11201	340 aa		18.03	■□□□□ 0.48
ATG13-222	ENST00000534610	PKP1	Q13835	747 aa		18.03	■□□□□ 0.48
ATG13-222	ENST00000534610	TGFBRAP1	Q8WUH2	860 aa		18.03	■□□□□ 0.48
ATG13-222	ENST00000534610	INCENP	Q9NQS7	918 aa		18.03	■□□□□ 0.48
ATG13-222	ENST00000534610	GOLGA8B	A8MQT2	603 aa		18.02	■□□□□ 0.47
ATG13-222	ENST00000534610		F8W031	263 aa	Predicted RBP	18.02	■□□□□ 0.47
ATG13-222	ENST00000534610	KIF3C	O14782	793 aa		18.02	■□□□□ 0.47
ATG13-222	ENST00000534610	POLR3D	P05423	398 aa	Predicted RBP	18.02	■□□□□ 0.47
ATG13-222	ENST00000534610	CCT2	P78371	535 aa	Known RBP	18.02	■□□□□ 0.47
ATG13-222	ENST00000534610	HHIPL2	Q6UWX4	724 aa		18.02	■□□□□ 0.47
ATG13-222	ENST00000534610	IQCA1	Q86XH1	822 aa		18.02	■□□□□ 0.47
ATG13-222	ENST00000534610	IGDCC4	Q8TDY8	1250 aa		18.02	■□□□□ 0.47
ATG13-222	ENST00000534610	TEKT1	Q969V4	418 aa		18.02	■□□□□ 0.47
ATG13-222	ENST00000534610	MRI	Q9BWK5	157 aa		18.02	■□□□□ 0.47
ATG13-222	ENST00000534610	ZNF287	Q9HBT7	754 aa		18.02	■□□□□ 0.47
ATG13-222	ENST00000534610	GPBP1L1	Q9HC44	474 aa	Predicted RBP	18.02	■□□□□ 0.47
ATG13-222	ENST00000534610	ZDHHC9	Q9Y397	364 aa		18.02	■□□□□ 0.47
ATG13-222	ENST00000534610	CPLX1	O14810	134 aa		18.01	■□□□□ 0.47
ATG13-222	ENST00000534610	RANBP6	O60518	1105 aa	Known RBP	18.01	■□□□□ 0.47
ATG13-222	ENST00000534610	BAG4	O95429	457 aa	Known RBP	18.01	■□□□□ 0.47
ATG13-222	ENST00000534610	FGR	P09769	529 aa		18.01	■□□□□ 0.47
ATG13-222	ENST00000534610	ZSCAN22	P10073	491 aa	Predicted RBP	18.01	■□□□□ 0.47
ATG13-222	ENST00000534610	WTAP	Q15007	396 aa		18.01	■□□□□ 0.47
ATG13-222	ENST00000534610	CPLX2	Q6PUV4	134 aa	Known RBP	18.01	■□□□□ 0.47
ATG13-222	ENST00000534610	DAGLA	Q9Y4D2	1042 aa		18.01	■□□□□ 0.47
ATG13-222	ENST00000534610	ORC4	O43929	436 aa		18	■□□□□ 0.47

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