RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 DDTLA6NHG4 134 aaPredicted RBP16.98■□□□□ 0.31
VPS11-205ENST00000534551 RASSF10A6NK89 507 aa16.98■□□□□ 0.31
VPS11-205ENST00000534551 FKBP1CQ5VVH2 108 aa16.98■□□□□ 0.31
VPS11-205ENST00000534551 MAPKAPK5Q8IW41 473 aa16.98■□□□□ 0.31
VPS11-205ENST00000534551 C2orf69Q8N8R5 385 aa16.98■□□□□ 0.31
VPS11-205ENST00000534551 TGFBRAP1Q8WUH2 860 aa16.98■□□□□ 0.31
VPS11-205ENST00000534551 FAM151AQ8WW52 585 aa16.98■□□□□ 0.31
VPS11-205ENST00000534551 IDI2Q9BXS1 227 aa16.98■□□□□ 0.31
VPS11-205ENST00000534551 FLT1P17948 1338 aa16.97■□□□□ 0.31
VPS11-205ENST00000534551 FAM196BA6NMK8 535 aa16.97■□□□□ 0.31
VPS11-205ENST00000534551 MBD4O95243 580 aa16.97■□□□□ 0.31
VPS11-205ENST00000534551 NF2P35240 595 aa16.97■□□□□ 0.31
VPS11-205ENST00000534551 VEGFBP49765 207 aa16.97■□□□□ 0.31
VPS11-205ENST00000534551 PPP4CP60510 307 aa16.97■□□□□ 0.31
VPS11-205ENST00000534551 MIGA2Q7L4E1 593 aa16.97■□□□□ 0.31
VPS11-205ENST00000534551 KLRG1Q96E93 195 aa16.97■□□□□ 0.31
VPS11-205ENST00000534551 FSD1Q9BTV5 496 aa16.97■□□□□ 0.31
VPS11-205ENST00000534551 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.97■□□□□ 0.31
VPS11-205ENST00000534551 OSBPL5Q9H0X9 879 aaPredicted RBP16.97■□□□□ 0.31
VPS11-205ENST00000534551 ARMT1Q9H993 441 aa16.97■□□□□ 0.31
VPS11-205ENST00000534551 SAP30BPQ9UHR5 308 aaKnown RBP16.97■□□□□ 0.31
VPS11-205ENST00000534551 PHIPQ8WWQ0 1821 aa16.96■□□□□ 0.31
VPS11-205ENST00000534551 MAGEB6P1A0A0J9YX57 407 aa16.96■□□□□ 0.31
VPS11-205ENST00000534551 BAG3O95817 575 aa16.96■□□□□ 0.31
VPS11-205ENST00000534551 EVX2Q03828 476 aa16.96■□□□□ 0.31
VPS11-205ENST00000534551 ZSCAN29Q8IWY8 852 aaPredicted RBP16.96■□□□□ 0.31
VPS11-205ENST00000534551 CLMNQ96JQ2 1002 aa16.96■□□□□ 0.31
VPS11-205ENST00000534551 PUS7LQ9H0K6 701 aaKnown RBP16.96■□□□□ 0.31
VPS11-205ENST00000534551 COL2A1P02458 1487 aaPredicted RBP16.96■□□□□ 0.31
VPS11-205ENST00000534551 M0R2C6 588 aa16.95■□□□□ 0.3
VPS11-205ENST00000534551 AOC2O75106 756 aa16.95■□□□□ 0.3
VPS11-205ENST00000534551 ENTPD3O75355 529 aa16.95■□□□□ 0.3
VPS11-205ENST00000534551 USP2O75604 605 aaPredicted RBP16.95■□□□□ 0.3
VPS11-205ENST00000534551 DEFB115Q30KQ5 88 aa16.95■□□□□ 0.3
VPS11-205ENST00000534551 SUPT20HL1Q3ZLR7 823 aa16.95■□□□□ 0.3
VPS11-205ENST00000534551 SDR42E1Q8WUS8 393 aa16.95■□□□□ 0.3
VPS11-205ENST00000534551 CCDC136Q96JN2 1154 aa16.95■□□□□ 0.3
VPS11-205ENST00000534551 CAPNS2Q96L46 248 aa16.95■□□□□ 0.3
VPS11-205ENST00000534551 CSRNP1Q96S65 589 aa16.95■□□□□ 0.3
VPS11-205ENST00000534551 ZIC5Q96T25 663 aa16.95■□□□□ 0.3
VPS11-205ENST00000534551 SEC62Q99442 399 aaKnown RBP16.95■□□□□ 0.3
VPS11-205ENST00000534551 PTPRFP10586 1907 aa16.94■□□□□ 0.3
VPS11-205ENST00000534551 PRKAB2O43741 272 aa16.94■□□□□ 0.3
VPS11-205ENST00000534551 GSPT1P15170 499 aaKnown RBP16.94■□□□□ 0.3
VPS11-205ENST00000534551 PLCG2P16885 1265 aa16.94■□□□□ 0.3
VPS11-205ENST00000534551 MKRN3Q13064 507 aaKnown RBP16.94■□□□□ 0.3
VPS11-205ENST00000534551 UBE3CQ15386 1083 aa16.94■□□□□ 0.3
VPS11-205ENST00000534551 RASAL3Q86YV0 1011 aa16.94■□□□□ 0.3
VPS11-205ENST00000534551 OSBP2Q969R2 916 aa16.94■□□□□ 0.3
VPS11-205ENST00000534551 FAM155AB1AL88 458 aaPredicted RBP16.93■□□□□ 0.3
VPS11-205ENST00000534551 TRIM6-TRIM34B2RNG4 842 aa16.93■□□□□ 0.3
VPS11-205ENST00000534551 USP5P45974 858 aa16.93■□□□□ 0.3
VPS11-205ENST00000534551 RGMBQ6NW40 437 aa16.93■□□□□ 0.3
VPS11-205ENST00000534551 CENPQQ7L2Z9 268 aaPredicted RBP16.93■□□□□ 0.3
VPS11-205ENST00000534551 ARMC9Q7Z3E5 817 aa16.93■□□□□ 0.3
VPS11-205ENST00000534551 CNKSR2Q8WXI2 1034 aa16.93■□□□□ 0.3
VPS11-205ENST00000534551 OSBPL3Q9H4L5 887 aa16.93■□□□□ 0.3
VPS11-205ENST00000534551 WDR33Q9C0J8 1336 aaKnown RBP16.93■□□□□ 0.3
VPS11-205ENST00000534551 SMIM22K7EJ46 135 aa16.92■□□□□ 0.3
VPS11-205ENST00000534551 RNF113AO15541 343 aaKnown RBP16.92■□□□□ 0.3
VPS11-205ENST00000534551 IGSF3O75054 1194 aa16.92■□□□□ 0.3
VPS11-205ENST00000534551 INPP5BP32019 993 aa16.92■□□□□ 0.3
VPS11-205ENST00000534551 ZNF157P51786 506 aaPredicted RBP16.92■□□□□ 0.3
VPS11-205ENST00000534551 FKBP1BP68106 108 aa16.92■□□□□ 0.3
VPS11-205ENST00000534551 LDLRAD1Q5T700 205 aa16.92■□□□□ 0.3
VPS11-205ENST00000534551 CCDC129Q6ZRS4 1044 aa16.92■□□□□ 0.3
VPS11-205ENST00000534551 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.92■□□□□ 0.3
VPS11-205ENST00000534551 APPBP2Q92624 585 aa16.92■□□□□ 0.3
VPS11-205ENST00000534551 RILPL2Q969X0 211 aa16.92■□□□□ 0.3
VPS11-205ENST00000534551 WRNIP1Q96S55 665 aa16.92■□□□□ 0.3
VPS11-205ENST00000534551 PALD1Q9ULE6 856 aa16.92■□□□□ 0.3
VPS11-205ENST00000534551 PPP1R12BO60237 982 aaPredicted RBP16.91■□□□□ 0.3
VPS11-205ENST00000534551 SLC10A3P09131 477 aa16.91■□□□□ 0.3
VPS11-205ENST00000534551 VGLL4Q14135 290 aa16.91■□□□□ 0.3
VPS11-205ENST00000534551 MAP3K11Q16584 847 aa16.91■□□□□ 0.3
VPS11-205ENST00000534551 TTC22Q5TAA0 569 aa16.91■□□□□ 0.3
VPS11-205ENST00000534551 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.91■□□□□ 0.3
VPS11-205ENST00000534551 EVI5LQ96CN4 794 aa16.91■□□□□ 0.3
VPS11-205ENST00000534551 DNAJC18Q9H819 358 aa16.91■□□□□ 0.3
VPS11-205ENST00000534551 ELP3Q9H9T3 547 aa16.91■□□□□ 0.3
VPS11-205ENST00000534551 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.91■□□□□ 0.3
VPS11-205ENST00000534551 A0A0D9SFI3 127 aa16.9■□□□□ 0.3
VPS11-205ENST00000534551 GPAA1O43292 621 aa16.9■□□□□ 0.3
VPS11-205ENST00000534551 NPM3O75607 178 aaKnown RBP16.9■□□□□ 0.3
VPS11-205ENST00000534551 CYP2D6P10635 497 aa16.9■□□□□ 0.3
VPS11-205ENST00000534551 GJA5P36382 358 aa16.9■□□□□ 0.3
VPS11-205ENST00000534551 IREB2P48200 963 aaKnown RBP16.9■□□□□ 0.3
VPS11-205ENST00000534551 ZSCAN25Q6NSZ9 544 aa16.9■□□□□ 0.3
VPS11-205ENST00000534551 ZKSCAN4Q969J2 545 aaPredicted RBP16.9■□□□□ 0.3
VPS11-205ENST00000534551 AIDAQ96BJ3 306 aa16.9■□□□□ 0.3
VPS11-205ENST00000534551 HHIPL1Q96JK4 782 aa16.9■□□□□ 0.3
VPS11-205ENST00000534551 FAM227BQ96M60 508 aa16.9■□□□□ 0.3
VPS11-205ENST00000534551 ZNF341Q9BYN7 854 aa16.9■□□□□ 0.3
VPS11-205ENST00000534551 CRNKL1Q9BZJ0 848 aaKnown RBP16.9■□□□□ 0.3
VPS11-205ENST00000534551 LAMA4Q16363 1823 aa16.89■□□□□ 0.29
VPS11-205ENST00000534551 CYP2D7A0A087X1C5 515 aa16.89■□□□□ 0.29
VPS11-205ENST00000534551 RRP1BQ14684 758 aaKnown RBP16.89■□□□□ 0.29
VPS11-205ENST00000534551 SHROOM1Q2M3G4 852 aaPredicted RBP16.89■□□□□ 0.29
VPS11-205ENST00000534551 ZMYM1Q5SVZ6 1142 aa16.89■□□□□ 0.29
VPS11-205ENST00000534551 DCAF15Q66K64 600 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms