RNA–Protein interactions for RNA: ENST00000534315.5

FOXRED1-218, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 1 (best)

Gene FOXRED1, Length 2,210 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-218ENST00000534315 CCDC39Q9UFE4 941 aa15.88■□□□□ 0.13
FOXRED1-218ENST00000534315 CLIC4Q9Y696 253 aa15.88■□□□□ 0.13
FOXRED1-218ENST00000534315 ADCY5O95622 1261 aa15.87■□□□□ 0.13
FOXRED1-218ENST00000534315 MSNP26038 577 aaKnown RBP15.87■□□□□ 0.13
FOXRED1-218ENST00000534315 IARSP41252 1262 aaKnown RBP15.87■□□□□ 0.13
FOXRED1-218ENST00000534315 SART3Q15020 963 aaKnown RBP15.87■□□□□ 0.13
FOXRED1-218ENST00000534315 SLC51AQ86UW1 340 aa15.87■□□□□ 0.13
FOXRED1-218ENST00000534315 TXNRD3Q86VQ6 643 aa15.87■□□□□ 0.13
FOXRED1-218ENST00000534315 FAM200AQ8TCP9 573 aa15.87■□□□□ 0.13
FOXRED1-218ENST00000534315 NSUN4Q96CB9 384 aaKnown RBP15.87■□□□□ 0.13
FOXRED1-218ENST00000534315 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.87■□□□□ 0.13
FOXRED1-218ENST00000534315 ANAPC4Q9UJX5 808 aa15.87■□□□□ 0.13
FOXRED1-218ENST00000534315 TAOK2Q9UL54 1235 aa15.87■□□□□ 0.13
FOXRED1-218ENST00000534315 TRPC5Q9UL62 973 aaPredicted RBP15.87■□□□□ 0.13
FOXRED1-218ENST00000534315 PCDHA7Q9UN72 937 aa15.87■□□□□ 0.13
FOXRED1-218ENST00000534315 PDS5AQ29RF7 1337 aaKnown RBP15.87■□□□□ 0.13
FOXRED1-218ENST00000534315 CHAF1AQ13111 956 aaPredicted RBP15.87■□□□□ 0.13
FOXRED1-218ENST00000534315 KRT40Q6A162 431 aa15.87■□□□□ 0.13
FOXRED1-218ENST00000534315 SYNE3Q6ZMZ3 975 aa15.87■□□□□ 0.13
FOXRED1-218ENST00000534315 CCDC73Q6ZRK6 1079 aa15.87■□□□□ 0.13
FOXRED1-218ENST00000534315 FSIP1Q8NA03 581 aa15.87■□□□□ 0.13
FOXRED1-218ENST00000534315 LINC00301Q8NCQ3 95 aa15.87■□□□□ 0.13
FOXRED1-218ENST00000534315 RGS22Q8NE09 1264 aa15.87■□□□□ 0.13
FOXRED1-218ENST00000534315 BCL11BQ9C0K0 894 aaPredicted RBP15.87■□□□□ 0.13
FOXRED1-218ENST00000534315 NID2Q14112 1375 aa15.87■□□□□ 0.13
FOXRED1-218ENST00000534315 MECOMQ03112 1051 aa15.86■□□□□ 0.13
FOXRED1-218ENST00000534315 SNW1Q13573 536 aaKnown RBP15.86■□□□□ 0.13
FOXRED1-218ENST00000534315 STK38Q15208 465 aa15.86■□□□□ 0.13
FOXRED1-218ENST00000534315 ANO6Q4KMQ2 910 aa15.86■□□□□ 0.13
FOXRED1-218ENST00000534315 CNBD1Q8NA66 436 aa15.86■□□□□ 0.13
FOXRED1-218ENST00000534315 BRIP1Q9BX63 1249 aa15.86■□□□□ 0.13
FOXRED1-218ENST00000534315 POLR3EQ9NVU0 708 aa15.86■□□□□ 0.13
FOXRED1-218ENST00000534315 CYP2D7A0A087X1C5 515 aa15.86■□□□□ 0.13
FOXRED1-218ENST00000534315 ERICH2A1L162 156 aa15.86■□□□□ 0.13
FOXRED1-218ENST00000534315 UBE2Q2LH0YL09 131 aa15.86■□□□□ 0.13
FOXRED1-218ENST00000534315 YEATS4O95619 227 aa15.86■□□□□ 0.13
FOXRED1-218ENST00000534315 PTMAP06454 111 aaKnown RBP15.86■□□□□ 0.13
FOXRED1-218ENST00000534315 PRDX5P30044 214 aa15.86■□□□□ 0.13
FOXRED1-218ENST00000534315 ENGASEQ8NFI3 743 aa15.86■□□□□ 0.13
FOXRED1-218ENST00000534315 MTA3Q9BTC8 594 aa15.86■□□□□ 0.13
FOXRED1-218ENST00000534315 SLC26A6Q9BXS9 759 aa15.86■□□□□ 0.13
FOXRED1-218ENST00000534315 MYH2Q9UKX2 1941 aa15.85■□□□□ 0.13
FOXRED1-218ENST00000534315 IRS2Q9Y4H2 1338 aa15.85■□□□□ 0.13
FOXRED1-218ENST00000534315 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.85■□□□□ 0.13
FOXRED1-218ENST00000534315 AP5Z1O43299 807 aa15.85■□□□□ 0.13
FOXRED1-218ENST00000534315 PLCB2Q00722 1185 aa15.85■□□□□ 0.13
FOXRED1-218ENST00000534315 FAM160A1Q05DH4 1040 aa15.85■□□□□ 0.13
FOXRED1-218ENST00000534315 GRAPQ13588 217 aa15.85■□□□□ 0.13
FOXRED1-218ENST00000534315 SASS6Q6UVJ0 657 aa15.85■□□□□ 0.13
FOXRED1-218ENST00000534315 GRAPLQ8TC17 118 aaPredicted RBP15.85■□□□□ 0.13
FOXRED1-218ENST00000534315 JAG2Q9Y219 1238 aa15.85■□□□□ 0.13
FOXRED1-218ENST00000534315 ZKSCAN5Q9Y2L8 839 aa15.85■□□□□ 0.13
FOXRED1-218ENST00000534315 UBR3Q6ZT12 1888 aa15.85■□□□□ 0.13
FOXRED1-218ENST00000534315 STK36Q9NRP7 1315 aa15.85■□□□□ 0.13
FOXRED1-218ENST00000534315 DUOX1Q9NRD9 1551 aa15.85■□□□□ 0.13
FOXRED1-218ENST00000534315 EP400Q96L91 3159 aa15.85■□□□□ 0.13
FOXRED1-218ENST00000534315 FMNL1O95466 1100 aaPredicted RBP15.84■□□□□ 0.13
FOXRED1-218ENST00000534315 IFNAR1P17181 557 aa15.84■□□□□ 0.13
FOXRED1-218ENST00000534315 SSRP1Q08945 709 aaKnown RBP15.84■□□□□ 0.13
FOXRED1-218ENST00000534315 SF3A1Q15459 793 aaKnown RBP15.84■□□□□ 0.13
FOXRED1-218ENST00000534315 RTN1Q16799 776 aa15.84■□□□□ 0.13
FOXRED1-218ENST00000534315 ADALQ6DHV7 355 aa15.84■□□□□ 0.13
FOXRED1-218ENST00000534315 CERKQ8TCT0 537 aa15.84■□□□□ 0.13
FOXRED1-218ENST00000534315 KCNG4Q8TDN1 519 aa15.84■□□□□ 0.13
FOXRED1-218ENST00000534315 ESR2Q92731 530 aa15.84■□□□□ 0.13
FOXRED1-218ENST00000534315 UBAC1Q9BSL1 405 aa15.84■□□□□ 0.13
FOXRED1-218ENST00000534315 MAST2Q6P0Q8 1798 aa15.84■□□□□ 0.13
FOXRED1-218ENST00000534315 SPTLC2O15270 562 aa15.84■□□□□ 0.13
FOXRED1-218ENST00000534315 ADRA2BP18089 450 aa15.84■□□□□ 0.13
FOXRED1-218ENST00000534315 ANO1Q5XXA6 986 aa15.84■□□□□ 0.13
FOXRED1-218ENST00000534315 LUZP1Q86V48 1076 aa15.84■□□□□ 0.13
FOXRED1-218ENST00000534315 TMTC2Q8N394 836 aa15.84■□□□□ 0.13
FOXRED1-218ENST00000534315 MRPS27Q92552 414 aaKnown RBP15.84■□□□□ 0.13
FOXRED1-218ENST00000534315 AATFQ9NY61 560 aaKnown RBP eCLIP15.84■□□□□ 0.135e-6■■■■□ 23
FOXRED1-218ENST00000534315 CCDC88AQ3V6T2 1871 aa15.84■□□□□ 0.13
FOXRED1-218ENST00000534315 KINO60870 393 aaKnown RBP15.83■□□□□ 0.13
FOXRED1-218ENST00000534315 PRR5LQ6MZQ0 368 aa15.83■□□□□ 0.13
FOXRED1-218ENST00000534315 ZNF654Q8IZM8 581 aa15.83■□□□□ 0.13
FOXRED1-218ENST00000534315 CBX8Q9HC52 389 aa15.83■□□□□ 0.13
FOXRED1-218ENST00000534315 ANKIB1Q9P2G1 1089 aa15.83■□□□□ 0.13
FOXRED1-218ENST00000534315 TNKSO95271 1327 aa15.83■□□□□ 0.12
FOXRED1-218ENST00000534315 A0A1W2PQ27 194 aa15.83■□□□□ 0.12
FOXRED1-218ENST00000534315 A0A1W2PQ64 194 aa15.83■□□□□ 0.12
FOXRED1-218ENST00000534315 A0A1W2PQD8 194 aa15.83■□□□□ 0.12
FOXRED1-218ENST00000534315 GUCY1A2P33402 732 aa15.83■□□□□ 0.12
FOXRED1-218ENST00000534315 TRIM29Q14134 588 aa15.83■□□□□ 0.12
FOXRED1-218ENST00000534315 SEC23AQ15436 765 aa15.83■□□□□ 0.12
FOXRED1-218ENST00000534315 CTR9Q6PD62 1173 aa15.83■□□□□ 0.12
FOXRED1-218ENST00000534315 MPNDQ8N594 471 aa15.83■□□□□ 0.12
FOXRED1-218ENST00000534315 A0A1B0GVL5 298 aa15.82■□□□□ 0.12
FOXRED1-218ENST00000534315 CTAGE5O15320 804 aa15.82■□□□□ 0.12
FOXRED1-218ENST00000534315 PRDM1O75626 825 aa15.82■□□□□ 0.12
FOXRED1-218ENST00000534315 GNL2Q13823 731 aaKnown RBP15.82■□□□□ 0.12
FOXRED1-218ENST00000534315 FMR1NBQ8N0W7 255 aaPredicted RBP15.82■□□□□ 0.12
FOXRED1-218ENST00000534315 NUP133Q8WUM0 1156 aa15.82■□□□□ 0.12
FOXRED1-218ENST00000534315 DNAJC25Q9H1X3 360 aa15.82■□□□□ 0.12
FOXRED1-218ENST00000534315 USP17L12C9JPN9 530 aa15.82■□□□□ 0.12
FOXRED1-218ENST00000534315 USP17L21D6R901 530 aa15.82■□□□□ 0.12
FOXRED1-218ENST00000534315 GYS1P13807 737 aa15.82■□□□□ 0.12
FOXRED1-218ENST00000534315 RCAN1P53805 252 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms