RNA–Protein interactions for RNA: ENST00000533756.5

PACS1-213, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-213ENST00000533756 HDLBPQ00341 1268 aaKnown RBP11.57□□□□□ -0.56
PACS1-213ENST00000533756 MFSD14BQ5SR56 506 aa11.57□□□□□ -0.56
PACS1-213ENST00000533756 TRMT44Q8IYL2 757 aaKnown RBP11.57□□□□□ -0.56
PACS1-213ENST00000533756 PLEKHF1Q96S99 279 aa11.57□□□□□ -0.56
PACS1-213ENST00000533756 MPHOSPH8Q99549 860 aa11.57□□□□□ -0.56
PACS1-213ENST00000533756 C11orf16Q9NQ32 467 aa11.57□□□□□ -0.56
PACS1-213ENST00000533756 TMOD2Q9NZR1 351 aa11.57□□□□□ -0.56
PACS1-213ENST00000533756 JAG2Q9Y219 1238 aa11.57□□□□□ -0.56
PACS1-213ENST00000533756 SMIM22K7EJ46 135 aa11.56□□□□□ -0.56
PACS1-213ENST00000533756 RTP1P59025 263 aa11.56□□□□□ -0.56
PACS1-213ENST00000533756 CHRNDQ07001 517 aa11.56□□□□□ -0.56
PACS1-213ENST00000533756 GOLGA2Q08379 1002 aa11.56□□□□□ -0.56
PACS1-213ENST00000533756 RNPC3Q96LT9 517 aaKnown RBP11.56□□□□□ -0.56
PACS1-213ENST00000533756 DNAH12Q6ZR08 3092 aa11.55□□□□□ -0.56
PACS1-213ENST00000533756 CACNB3P54284 484 aa11.55□□□□□ -0.56
PACS1-213ENST00000533756 CACNB2Q08289 660 aaPredicted RBP11.55□□□□□ -0.56
PACS1-213ENST00000533756 GADL1Q6ZQY3 521 aa11.55□□□□□ -0.56
PACS1-213ENST00000533756 TIFAQ96CG3 184 aa11.55□□□□□ -0.56
PACS1-213ENST00000533756 PNMA3Q9UL41 463 aa11.55□□□□□ -0.56
PACS1-213ENST00000533756 DOCK3Q8IZD9 2030 aa11.54□□□□□ -0.56
PACS1-213ENST00000533756 CYP2B6P20813 491 aa11.54□□□□□ -0.56
PACS1-213ENST00000533756 GCLCP48506 637 aaPredicted RBP11.54□□□□□ -0.56
PACS1-213ENST00000533756 ATN1P54259 1190 aaPredicted RBP11.54□□□□□ -0.56
PACS1-213ENST00000533756 NHLH1Q02575 133 aa11.54□□□□□ -0.56
PACS1-213ENST00000533756 CNGB1Q14028 1251 aaPredicted RBP11.54□□□□□ -0.56
PACS1-213ENST00000533756 CCDC85BQ15834 202 aaPredicted RBP11.54□□□□□ -0.56
PACS1-213ENST00000533756 MRIQ9BWK5 157 aa11.54□□□□□ -0.56
PACS1-213ENST00000533756 KCNH6Q9H252 994 aa11.54□□□□□ -0.56
PACS1-213ENST00000533756 AFG3L2Q9Y4W6 797 aa11.54□□□□□ -0.56
PACS1-213ENST00000533756 ZHX2Q9Y6X8 837 aa11.54□□□□□ -0.56
PACS1-213ENST00000533756 SPEF2Q9C093 1822 aa11.53□□□□□ -0.56
PACS1-213ENST00000533756 PRR33A8MZF0 331 aa11.53□□□□□ -0.56
PACS1-213ENST00000533756 SNAP23O00161 211 aa11.53□□□□□ -0.56
PACS1-213ENST00000533756 ITGA6P23229 1130 aa11.53□□□□□ -0.56
PACS1-213ENST00000533756 KRT24Q2M2I5 525 aa11.53□□□□□ -0.56
PACS1-213ENST00000533756 TDRD7Q8NHU6 1098 aaKnown RBP11.53□□□□□ -0.56
PACS1-213ENST00000533756 METTL22Q9BUU2 404 aaPredicted RBP11.53□□□□□ -0.56
PACS1-213ENST00000533756 PNNQ9H307 717 aaKnown RBP11.53□□□□□ -0.56
PACS1-213ENST00000533756 AGTPBP1Q9UPW5 1226 aa11.53□□□□□ -0.56
PACS1-213ENST00000533756 ATP11BQ9Y2G3 1177 aa11.53□□□□□ -0.56
PACS1-213ENST00000533756 XIRP2A4UGR9 3374 aa11.53□□□□□ -0.56
PACS1-213ENST00000533756 PI4K2BG5E9Z4 385 aa11.52□□□□□ -0.57
PACS1-213ENST00000533756 DNM1LO00429 736 aa11.52□□□□□ -0.57
PACS1-213ENST00000533756 TAF5LO75529 589 aa11.52□□□□□ -0.57
PACS1-213ENST00000533756 ZKSCAN1P17029 563 aaPredicted RBP11.52□□□□□ -0.57
PACS1-213ENST00000533756 CCND3P30281 292 aaPredicted RBP11.52□□□□□ -0.57
PACS1-213ENST00000533756 ADGRE1Q14246 886 aa11.52□□□□□ -0.57
PACS1-213ENST00000533756 FAM151AQ8WW52 585 aa11.52□□□□□ -0.57
PACS1-213ENST00000533756 TEKT1Q969V4 418 aa11.52□□□□□ -0.57
PACS1-213ENST00000533756 ZDHHC15Q96MV8 337 aa11.52□□□□□ -0.57
PACS1-213ENST00000533756 NUDT12Q9BQG2 462 aa11.52□□□□□ -0.57
PACS1-213ENST00000533756 PRDM12Q9H4Q4 367 aa11.52□□□□□ -0.57
PACS1-213ENST00000533756 PRDM5Q9NQX1 630 aaPredicted RBP11.52□□□□□ -0.57
PACS1-213ENST00000533756 FAM86C2PA6NEL3 165 aa11.51□□□□□ -0.57
PACS1-213ENST00000533756 HAX1O00165 279 aa11.51□□□□□ -0.57
PACS1-213ENST00000533756 CHL1O00533 1208 aa11.51□□□□□ -0.57
PACS1-213ENST00000533756 MSCO60682 206 aa11.51□□□□□ -0.57
PACS1-213ENST00000533756 PTPRAP18433 802 aa11.51□□□□□ -0.57
PACS1-213ENST00000533756 SLC39A5Q6ZMH5 540 aa11.51□□□□□ -0.57
PACS1-213ENST00000533756 SCYL3Q8IZE3 742 aa11.51□□□□□ -0.57
PACS1-213ENST00000533756 SOCS4Q8WXH5 440 aa11.51□□□□□ -0.57
PACS1-213ENST00000533756 LPAR1Q92633 364 aa11.51□□□□□ -0.57
PACS1-213ENST00000533756 PICK1Q9NRD5 415 aa11.51□□□□□ -0.57
PACS1-213ENST00000533756 TCF20Q9UGU0 1960 aaKnown RBP11.5□□□□□ -0.57
PACS1-213ENST00000533756 IGFBP4P22692 258 aa11.5□□□□□ -0.57
PACS1-213ENST00000533756 KCNQ1P51787 676 aa11.5□□□□□ -0.57
PACS1-213ENST00000533756 APOBEC3HQ6NTF7 200 aaKnown RBP11.5□□□□□ -0.57
PACS1-213ENST00000533756 PHAXQ9H814 394 aaKnown RBP11.5□□□□□ -0.57
PACS1-213ENST00000533756 PDLIM7Q9NR12 457 aa11.5□□□□□ -0.57
PACS1-213ENST00000533756 MAPK8IP3Q9UPT6 1336 aa11.5□□□□□ -0.57
PACS1-213ENST00000533756 TRIM43BA6NCK2 446 aa11.49□□□□□ -0.57
PACS1-213ENST00000533756 ERC2O15083 957 aa11.49□□□□□ -0.57
PACS1-213ENST00000533756 CSF1RP07333 972 aa11.49□□□□□ -0.57
PACS1-213ENST00000533756 PPP2R1AP30153 589 aa11.49□□□□□ -0.57
PACS1-213ENST00000533756 EPHB4P54760 987 aa11.49□□□□□ -0.57
PACS1-213ENST00000533756 TFF2Q03403 129 aa11.49□□□□□ -0.57
PACS1-213ENST00000533756 SNX17Q15036 470 aa11.49□□□□□ -0.57
PACS1-213ENST00000533756 C1orf53Q5VUE5 145 aa11.49□□□□□ -0.57
PACS1-213ENST00000533756 TRIM43Q96BQ3 446 aaPredicted RBP11.49□□□□□ -0.57
PACS1-213ENST00000533756 PLA2G12BQ9BX93 195 aa11.49□□□□□ -0.57
PACS1-213ENST00000533756 MORF4L1Q9UBU8 362 aa11.49□□□□□ -0.57
PACS1-213ENST00000533756 PHF20L1A8MW92 1017 aa11.48□□□□□ -0.57
PACS1-213ENST00000533756 ST18O60284 1047 aa11.48□□□□□ -0.57
PACS1-213ENST00000533756 DDX58O95786 925 aaKnown RBP11.48□□□□□ -0.57
PACS1-213ENST00000533756 RIPK4P57078 832 aa11.48□□□□□ -0.57
PACS1-213ENST00000533756 LMOD3Q0VAK6 560 aa11.48□□□□□ -0.57
PACS1-213ENST00000533756 PABPC4Q13310 644 aaKnown RBP eCLIP11.48□□□□□ -0.57
PACS1-213ENST00000533756 SH3RF1Q7Z6J0 888 aa11.48□□□□□ -0.57
PACS1-213ENST00000533756 PROCA1Q8NCQ7 364 aaPredicted RBP11.48□□□□□ -0.57
PACS1-213ENST00000533756 TBC1D22AQ8WUA7 517 aa11.48□□□□□ -0.57
PACS1-213ENST00000533756 HERVK_113Q902F9 699 aa11.48□□□□□ -0.57
PACS1-213ENST00000533756 USP6NLQ92738 828 aa11.48□□□□□ -0.57
PACS1-213ENST00000533756 KHSRPQ92945 711 aaKnown RBP eCLIP11.48□□□□□ -0.573e-6■■■□□ 15.4
PACS1-213ENST00000533756 DDX20Q9UHI6 824 aaKnown RBP11.48□□□□□ -0.57
PACS1-213ENST00000533756 TACC3Q9Y6A5 838 aa11.48□□□□□ -0.57
PACS1-213ENST00000533756 PLXNB2O15031 1838 aa11.48□□□□□ -0.57
PACS1-213ENST00000533756 MYH3P11055 1940 aa11.48□□□□□ -0.57
PACS1-213ENST00000533756 MYBBP1AQ9BQG0 1328 aaKnown RBP11.47□□□□□ -0.57
PACS1-213ENST00000533756 H7C1W4 665 aa11.47□□□□□ -0.57
PACS1-213ENST00000533756 TLL1O43897 1013 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 202.3 ms