RNA–Protein interactions for RNA: ENST00000533259.1

PDE4DIP-231, Transcript of phosphodiesterase 4D interacting protein, human

TSL 4

Gene PDE4DIP, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE4DIP-231	ENST00000533259	MAP3K10	Q02779	954 aa		13.2	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	CCDC102B	Q68D86	513 aa		13.2	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	SH3BP5L	Q7L8J4	393 aa		13.2	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	ANKRD23	Q86SG2	305 aa		13.2	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	NBPF11	Q86T75	865 aa		13.2	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	FAM163A	Q96GL9	167 aa	Predicted RBP	13.2	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	TMEM106C	Q9BVX2	250 aa		13.2	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	IDI2	Q9BXS1	227 aa		13.2	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	ZBTB40	Q9NUA8	1239 aa		13.2	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.2	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	ATRNL1	Q5VV63	1379 aa		13.2	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	GAK	O14976	1311 aa		13.19	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	PDHX	O00330	501 aa		13.19	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	WDHD1	O75717	1129 aa	Predicted RBP	13.19	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	GPAT2	Q6NUI2	795 aa		13.19	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	SH3TC2	Q8TF17	1288 aa		13.19	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	CPA4	Q9UI42	421 aa		13.19	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	ENTPD3	O75355	529 aa		13.18	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	GNRH1	P01148	92 aa		13.18	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	SLURP2	P0DP57	97 aa		13.18	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	PSMC4	P43686	418 aa		13.18	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	RGS3	P49796	1198 aa		13.18	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	RASGRF1	Q13972	1273 aa		13.18	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	KIF22	Q14807	665 aa		13.18	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	HABP4	Q5JVS0	413 aa	Known RBP	13.18	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	TRIM47	Q96LD4	638 aa		13.18	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	PDS5A	Q29RF7	1337 aa	Known RBP	13.17	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	DDTL	A6NHG4	134 aa	Predicted RBP	13.17	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	CXCL11	O14625	94 aa		13.17	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	MYC	P01106	439 aa	Predicted RBP	13.17	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	PRMT2	P55345	433 aa		13.17	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	MTX1	Q13505	466 aa		13.17	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	ZNF384	Q8TF68	577 aa		13.17	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	GCC1	Q96CN9	775 aa		13.17	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	XAGE2	Q96GT9	111 aa		13.17	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	DDX4	Q9NQI0	724 aa	Known RBP	13.17	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	SRRD	Q9UH36	339 aa		13.17	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	RFX7	Q2KHR2	1363 aa		13.17	□□□□□ -0.3
PDE4DIP-231	ENST00000533259		A0A1B0GUL7	405 aa		13.16	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	ECM2	O94769	699 aa	Predicted RBP	13.16	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	BCR	P11274	1271 aa		13.16	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	PTPRA	P18433	802 aa		13.16	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	OSBP	P22059	807 aa		13.16	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	TFCP2	Q12800	502 aa		13.16	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	MTFR1	Q15390	333 aa		13.16	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	SLC4A8	Q2Y0W8	1093 aa		13.16	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	ZGPAT	Q8N5A5	531 aa	Known RBP	13.16	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	AFG3L2	Q9Y4W6	797 aa		13.16	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	ZHX2	Q9Y6X8	837 aa		13.16	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	DOCK3	Q8IZD9	2030 aa		13.16	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	GPR75-ASB3	A0A0A6YYF3	556 aa		13.15	□□□□□ -0.3
PDE4DIP-231	ENST00000533259		A0A0G2JLL6	359 aa	Predicted RBP	13.15	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	SRGAP3	O43295	1099 aa		13.15	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	CYP2C8	P10632	490 aa		13.15	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	RHBDL3	P58872	404 aa		13.15	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	ATP8B2	P98198	1209 aa		13.15	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	AAMP	Q13685	434 aa		13.15	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.15	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	SCYL3	Q8IZE3	742 aa		13.15	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	ABCF2	Q9UG63	623 aa		13.15	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	RANBP2	P49792	3224 aa	Known RBP	13.15	□□□□□ -0.3
PDE4DIP-231	ENST00000533259	TRIOBP	Q9H2D6	2365 aa		13.14	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	PHIP	Q8WWQ0	1821 aa		13.14	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	FMNL1	O95466	1100 aa	Predicted RBP	13.14	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	BTD	P43251	543 aa		13.14	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	MECOM	Q03112	1051 aa		13.14	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.14	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.14	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	HMG20B	Q9P0W2	317 aa		13.14	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	AKAP2	Q9Y2D5	859 aa		13.14	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	PCDHB15	Q9Y5E8	787 aa		13.14	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	PTPRF	P10586	1907 aa		13.13	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	MGAM	O43451	1857 aa		13.13	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	CTNND1	O60716	968 aa	Known RBP	13.13	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	HMMR	O75330	724 aa		13.13	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	NPM3	O75607	178 aa	Known RBP	13.13	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	HOXD10	P28358	340 aa		13.13	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	GRK4	P32298	578 aa		13.13	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	CEP85	Q6P2H3	762 aa		13.13	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	PI16	Q6UXB8	463 aa		13.13	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	TBC1D9	Q6ZT07	1266 aa		13.13	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	ERICH6	Q7L0X2	663 aa		13.13	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	FASTKD5	Q7L8L6	764 aa	Known RBP	13.13	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	DZIP1	Q86YF9	867 aa	Known RBP	13.13	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.13	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	SLF2	Q8IX21	1173 aa		13.13	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	SHISA4	Q96DD7	197 aa		13.13	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	PARK7	Q99497	189 aa	Known RBP	13.13	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.13	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	SZT2	Q5T011	3432 aa		13.13	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	DOCK2	Q92608	1830 aa		13.13	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	MROH7-TTC4	A0A0A0MT08	1334 aa		13.13	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	PNMA6E	A0A0J9YXQ4	647 aa		13.12	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	TBC1D12	O60347	775 aa		13.12	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	RAET1E	Q8TD07	263 aa		13.12	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	NSUN4	Q96CB9	384 aa	Known RBP	13.12	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	NEUROD6	Q96NK8	337 aa		13.12	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	PICK1	Q9NRD5	415 aa		13.12	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	GABRQ	Q9UN88	632 aa		13.12	□□□□□ -0.31
PDE4DIP-231	ENST00000533259	ARID4A	P29374	1257 aa	Predicted RBP	13.11	□□□□□ -0.31

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