RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 PFDN2Q9UHV9 154 aa5.65□□□□□ -1.5
AC055878.1-201ENST00000531858 SPEF1Q9Y4P9 236 aa5.65□□□□□ -1.5
AC055878.1-201ENST00000531858 TLR3O15455 904 aaKnown RBP5.64□□□□□ -1.51
AC055878.1-201ENST00000531858 UPP2O95045 317 aa5.64□□□□□ -1.51
AC055878.1-201ENST00000531858 NPTXRO95502 500 aa5.64□□□□□ -1.51
AC055878.1-201ENST00000531858 ATP4AP20648 1035 aa5.64□□□□□ -1.51
AC055878.1-201ENST00000531858 GRNP28799 593 aaKnown RBP5.64□□□□□ -1.51
AC055878.1-201ENST00000531858 EVA1CP58658 441 aa5.64□□□□□ -1.51
AC055878.1-201ENST00000531858 SAMD5Q5TGI4 173 aa5.64□□□□□ -1.51
AC055878.1-201ENST00000531858 MYO1HQ8N1T3 1032 aa5.64□□□□□ -1.51
AC055878.1-201ENST00000531858 ATL2Q8NHH9 583 aa5.64□□□□□ -1.51
AC055878.1-201ENST00000531858 CEP63Q96MT8 703 aa5.64□□□□□ -1.51
AC055878.1-201ENST00000531858 BRMS1Q9HCU9 246 aa5.64□□□□□ -1.51
AC055878.1-201ENST00000531858 LATS2Q9NRM7 1088 aa5.64□□□□□ -1.51
AC055878.1-201ENST00000531858 TMEM39AQ9NV64 488 aa5.64□□□□□ -1.51
AC055878.1-201ENST00000531858 A0A1B0GTH6 734 aa5.63□□□□□ -1.51
AC055878.1-201ENST00000531858 A0A1W2PQH9 124 aa5.63□□□□□ -1.51
AC055878.1-201ENST00000531858 GOLGA6CA6NDK9 693 aa5.63□□□□□ -1.51
AC055878.1-201ENST00000531858 GOLGA6BA6NDN3 693 aa5.63□□□□□ -1.51
AC055878.1-201ENST00000531858 GSG1L2A8MUP6 293 aa5.63□□□□□ -1.51
AC055878.1-201ENST00000531858 MSTNO14793 375 aa5.63□□□□□ -1.51
AC055878.1-201ENST00000531858 LDHAP00338 332 aaKnown RBP5.63□□□□□ -1.51
AC055878.1-201ENST00000531858 GOLGA6DP0CG33 693 aa5.63□□□□□ -1.51
AC055878.1-201ENST00000531858 PAX3P23760 479 aa5.63□□□□□ -1.51
AC055878.1-201ENST00000531858 GUCY2CP25092 1073 aa5.63□□□□□ -1.51
AC055878.1-201ENST00000531858 GUCY2FP51841 1108 aa5.63□□□□□ -1.51
AC055878.1-201ENST00000531858 NEK2P51955 445 aa5.63□□□□□ -1.51
AC055878.1-201ENST00000531858 MAP7Q14244 749 aa5.63□□□□□ -1.51
AC055878.1-201ENST00000531858 DHX8Q14562 1220 aaKnown RBP5.63□□□□□ -1.51
AC055878.1-201ENST00000531858 PPP2R5EQ16537 467 aa5.63□□□□□ -1.51
AC055878.1-201ENST00000531858 NXNQ6DKJ4 435 aa5.63□□□□□ -1.51
AC055878.1-201ENST00000531858 C6orf15Q6UXA7 325 aaPredicted RBP5.63□□□□□ -1.51
AC055878.1-201ENST00000531858 LRRC69Q6ZNQ3 347 aa5.63□□□□□ -1.51
AC055878.1-201ENST00000531858 GK5Q6ZS86 529 aa5.63□□□□□ -1.51
AC055878.1-201ENST00000531858 CHPFQ8IZ52 775 aa5.63□□□□□ -1.51
AC055878.1-201ENST00000531858 PPM1KQ8N3J5 372 aa5.63□□□□□ -1.51
AC055878.1-201ENST00000531858 FBXO27Q8NI29 283 aa5.63□□□□□ -1.51
AC055878.1-201ENST00000531858 EVI5LQ96CN4 794 aa5.63□□□□□ -1.51
AC055878.1-201ENST00000531858 PSMG3-AS1Q96PY0 264 aa5.63□□□□□ -1.51
AC055878.1-201ENST00000531858 GOLGA6AQ9NYA3 693 aa5.63□□□□□ -1.51
AC055878.1-201ENST00000531858 ADCY3O60266 1144 aa5.62□□□□□ -1.51
AC055878.1-201ENST00000531858 CENPBP07199 599 aaPredicted RBP5.62□□□□□ -1.51
AC055878.1-201ENST00000531858 FAM153BP0C7A2 387 aa5.62□□□□□ -1.51
AC055878.1-201ENST00000531858 U2AF1L5P0DN76 240 aaPredicted RBP5.62□□□□□ -1.51
AC055878.1-201ENST00000531858 ARAFP10398 606 aa5.62□□□□□ -1.51
AC055878.1-201ENST00000531858 BMP2P12643 396 aa5.62□□□□□ -1.51
AC055878.1-201ENST00000531858 ATF3P18847 181 aa5.62□□□□□ -1.51
AC055878.1-201ENST00000531858 U2AF1Q01081 240 aaKnown RBP eCLIP5.62□□□□□ -1.51
AC055878.1-201ENST00000531858 RELBQ01201 579 aa5.62□□□□□ -1.51
AC055878.1-201ENST00000531858 CLCQ05315 142 aa5.62□□□□□ -1.51
AC055878.1-201ENST00000531858 HYAL2Q12891 473 aa5.62□□□□□ -1.51
AC055878.1-201ENST00000531858 ARSJQ5FYB0 599 aaPredicted RBP5.62□□□□□ -1.51
AC055878.1-201ENST00000531858 ZFYVE27Q5T4F4 411 aa5.62□□□□□ -1.51
AC055878.1-201ENST00000531858 INTS3Q68E01 1043 aaKnown RBP5.62□□□□□ -1.51
AC055878.1-201ENST00000531858 TTC6Q86TZ1 520 aa5.62□□□□□ -1.51
AC055878.1-201ENST00000531858 RAVER1Q8IY67 606 aaKnown RBP5.62□□□□□ -1.51
AC055878.1-201ENST00000531858 TCEAL8Q8IYN2 117 aa5.62□□□□□ -1.51
AC055878.1-201ENST00000531858 AHI1Q8N157 1196 aa5.62□□□□□ -1.51
AC055878.1-201ENST00000531858 GPR161Q8N6U8 529 aaKnown RBP5.62□□□□□ -1.51
AC055878.1-201ENST00000531858 TMEM102Q8N9M5 508 aaPredicted RBP5.62□□□□□ -1.51
AC055878.1-201ENST00000531858 PLD4Q96BZ4 506 aa5.62□□□□□ -1.51
AC055878.1-201ENST00000531858 OSMRQ99650 979 aa5.62□□□□□ -1.51
AC055878.1-201ENST00000531858 ZKSCAN3Q9BRR0 538 aa5.62□□□□□ -1.51
AC055878.1-201ENST00000531858 KLF16Q9BXK1 252 aaPredicted RBP5.62□□□□□ -1.51
AC055878.1-201ENST00000531858 COL25A1Q9BXS0 654 aaPredicted RBP5.62□□□□□ -1.51
AC055878.1-201ENST00000531858 EMILIN2Q9BXX0 1053 aa5.62□□□□□ -1.51
AC055878.1-201ENST00000531858 MRPL4Q9BYD3 311 aaKnown RBP5.62□□□□□ -1.51
AC055878.1-201ENST00000531858 ASPSCR1Q9BZE9 553 aa5.62□□□□□ -1.51
AC055878.1-201ENST00000531858 PHAXQ9H814 394 aaKnown RBP5.62□□□□□ -1.51
AC055878.1-201ENST00000531858 NCOA5Q9HCD5 579 aaKnown RBP5.62□□□□□ -1.51
AC055878.1-201ENST00000531858 GNL3LQ9NVN8 582 aaKnown RBP5.62□□□□□ -1.51
AC055878.1-201ENST00000531858 KANSL3Q9P2N6 904 aa5.62□□□□□ -1.51
AC055878.1-201ENST00000531858 A0A096LPE4 126 aa5.61□□□□□ -1.51
AC055878.1-201ENST00000531858 A0A1W2PPZ6 126 aa5.61□□□□□ -1.51
AC055878.1-201ENST00000531858 SHTN1A0MZ66 631 aa5.61□□□□□ -1.51
AC055878.1-201ENST00000531858 AGRPO00253 132 aa5.61□□□□□ -1.51
AC055878.1-201ENST00000531858 IRS4O14654 1257 aaPredicted RBP5.61□□□□□ -1.51
AC055878.1-201ENST00000531858 MAFGO15525 162 aa5.61□□□□□ -1.51
AC055878.1-201ENST00000531858 ARHGEF15O94989 841 aa5.61□□□□□ -1.51
AC055878.1-201ENST00000531858 SCGB1D2O95969 90 aa5.61□□□□□ -1.51
AC055878.1-201ENST00000531858 CYP2E1P05181 493 aaPredicted RBP5.61□□□□□ -1.51
AC055878.1-201ENST00000531858 NME2P22392 152 aa5.61□□□□□ -1.51
AC055878.1-201ENST00000531858 GRIA4P48058 902 aa5.61□□□□□ -1.51
AC055878.1-201ENST00000531858 ZNF143P52747 638 aaPredicted RBP5.61□□□□□ -1.51
AC055878.1-201ENST00000531858 RPL6Q02878 288 aaKnown RBP5.61□□□□□ -1.51
AC055878.1-201ENST00000531858 CCINQ13939 588 aa5.61□□□□□ -1.51
AC055878.1-201ENST00000531858 MLECQ14165 292 aa5.61□□□□□ -1.51
AC055878.1-201ENST00000531858 RNF219Q5W0B1 726 aaPredicted RBP5.61□□□□□ -1.51
AC055878.1-201ENST00000531858 PPP4R4Q6NUP7 873 aa5.61□□□□□ -1.51
AC055878.1-201ENST00000531858 DDX46Q7L014 1031 aaKnown RBP5.61□□□□□ -1.51
AC055878.1-201ENST00000531858 C11orf96Q7Z7L8 435 aa5.61□□□□□ -1.51
AC055878.1-201ENST00000531858 NCAPG2Q86XI2 1143 aa5.61□□□□□ -1.51
AC055878.1-201ENST00000531858 SVIPQ8NHG7 77 aa5.61□□□□□ -1.51
AC055878.1-201ENST00000531858 AGBL1Q96MI9 1066 aa5.61□□□□□ -1.51
AC055878.1-201ENST00000531858 IPO9Q96P70 1041 aaKnown RBP5.61□□□□□ -1.51
AC055878.1-201ENST00000531858 MPHOSPH6Q99547 160 aaKnown RBP5.61□□□□□ -1.51
AC055878.1-201ENST00000531858 SENP7Q9BQF6 1050 aa5.61□□□□□ -1.51
AC055878.1-201ENST00000531858 FAM126AQ9BYI3 521 aaPredicted RBP5.61□□□□□ -1.51
AC055878.1-201ENST00000531858 CDH19Q9H159 772 aa5.61□□□□□ -1.51
AC055878.1-201ENST00000531858 CRISPLD1Q9H336 500 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms