RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 ARMT1Q9H993 441 aa19.49■□□□□ 0.71
VPS26B-206ENST00000531741 SEC31BQ9NQW1 1179 aa19.49■□□□□ 0.71
VPS26B-206ENST00000531741 TUBE1Q9UJT0 475 aa19.49■□□□□ 0.71
VPS26B-206ENST00000531741 ROBO1Q9Y6N7 1651 aa19.49■□□□□ 0.71
VPS26B-206ENST00000531741 CCDC69A6NI79 296 aa19.48■□□□□ 0.71
VPS26B-206ENST00000531741 SMTNL1A8MU46 457 aa19.48■□□□□ 0.71
VPS26B-206ENST00000531741 IKBKBO14920 756 aa19.48■□□□□ 0.71
VPS26B-206ENST00000531741 RXRAP19793 462 aa19.48■□□□□ 0.71
VPS26B-206ENST00000531741 SYKP43405 635 aa19.48■□□□□ 0.71
VPS26B-206ENST00000531741 ELOA2Q8IYF1 753 aaPredicted RBP19.48■□□□□ 0.71
VPS26B-206ENST00000531741 ZNF710Q8N1W2 664 aa19.48■□□□□ 0.71
VPS26B-206ENST00000531741 TMTC2Q8N394 836 aa19.48■□□□□ 0.71
VPS26B-206ENST00000531741 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.48■□□□□ 0.71
VPS26B-206ENST00000531741 PAXBP1Q9Y5B6 917 aa19.48■□□□□ 0.71
VPS26B-206ENST00000531741 TPM4P67936 248 aa19.48■□□□□ 0.71
VPS26B-206ENST00000531741 CTDSPL2Q05D32 466 aa19.48■□□□□ 0.71
VPS26B-206ENST00000531741 SART3Q15020 963 aaKnown RBP19.48■□□□□ 0.71
VPS26B-206ENST00000531741 RESP18Q5W5W9 173 aa19.48■□□□□ 0.71
VPS26B-206ENST00000531741 TACC3Q9Y6A5 838 aa19.48■□□□□ 0.71
VPS26B-206ENST00000531741 NRAPQ86VF7 1730 aa19.47■□□□□ 0.71
VPS26B-206ENST00000531741 KDM4FA0A1W2PPD8 638 aa19.47■□□□□ 0.71
VPS26B-206ENST00000531741 CUTAO60888 179 aa19.47■□□□□ 0.71
VPS26B-206ENST00000531741 GNL2Q13823 731 aaKnown RBP19.47■□□□□ 0.71
VPS26B-206ENST00000531741 SHC4Q6S5L8 630 aa19.47■□□□□ 0.71
VPS26B-206ENST00000531741 NBPF11Q86T75 865 aa19.47■□□□□ 0.71
VPS26B-206ENST00000531741 DNAJC5Q9H3Z4 198 aa19.47■□□□□ 0.71
VPS26B-206ENST00000531741 RNF41Q9H4P4 317 aaPredicted RBP19.47■□□□□ 0.71
VPS26B-206ENST00000531741 LOC102724428A0A0B4J2F2 783 aa19.47■□□□□ 0.71
VPS26B-206ENST00000531741 TNNT1P13805 278 aa19.47■□□□□ 0.71
VPS26B-206ENST00000531741 MARCKSP29966 332 aaPredicted RBP19.47■□□□□ 0.71
VPS26B-206ENST00000531741 ATP6V1AP38606 617 aa19.47■□□□□ 0.71
VPS26B-206ENST00000531741 SIK1P57059 783 aa19.47■□□□□ 0.71
VPS26B-206ENST00000531741 CCZ1BP86790 482 aa19.47■□□□□ 0.71
VPS26B-206ENST00000531741 CCZ1P86791 482 aaPredicted RBP19.47■□□□□ 0.71
VPS26B-206ENST00000531741 SPATA31A1Q5TZJ5 1347 aa19.46■□□□□ 0.71
VPS26B-206ENST00000531741 SKILP12757 684 aa19.46■□□□□ 0.71
VPS26B-206ENST00000531741 NCAPHQ15003 741 aa19.46■□□□□ 0.71
VPS26B-206ENST00000531741 SYCP1Q15431 976 aa19.46■□□□□ 0.71
VPS26B-206ENST00000531741 LCORLQ8N3X6 602 aa19.46■□□□□ 0.71
VPS26B-206ENST00000531741 C16orf45Q96MC5 204 aaPredicted RBP19.46■□□□□ 0.71
VPS26B-206ENST00000531741 CDC5LQ99459 802 aaKnown RBP19.46■□□□□ 0.71
VPS26B-206ENST00000531741 BCL2L12Q9HB09 334 aa19.46■□□□□ 0.71
VPS26B-206ENST00000531741 INCENPQ9NQS7 918 aa19.46■□□□□ 0.71
VPS26B-206ENST00000531741 SLC4A4Q9Y6R1 1079 aa19.46■□□□□ 0.71
VPS26B-206ENST00000531741 ZNF804BA4D1E1 1349 aa19.46■□□□□ 0.71
VPS26B-206ENST00000531741 MYH14Q7Z406 1995 aaKnown RBP19.46■□□□□ 0.71
VPS26B-206ENST00000531741 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.45■□□□□ 0.7
VPS26B-206ENST00000531741 CCDC196A0A1B0GTZ2 297 aa19.45■□□□□ 0.7
VPS26B-206ENST00000531741 TDO2P48775 406 aa19.45■□□□□ 0.7
VPS26B-206ENST00000531741 BCAMP50895 628 aa19.45■□□□□ 0.7
VPS26B-206ENST00000531741 DDB1Q16531 1140 aa19.45■□□□□ 0.7
VPS26B-206ENST00000531741 SLC26A6Q9BXS9 759 aa19.45■□□□□ 0.7
VPS26B-206ENST00000531741 SNAP23O00161 211 aa19.45■□□□□ 0.7
VPS26B-206ENST00000531741 MMP1P03956 469 aa19.45■□□□□ 0.7
VPS26B-206ENST00000531741 CHRNDQ07001 517 aa19.45■□□□□ 0.7
VPS26B-206ENST00000531741 TPD52L1Q16890 204 aaPredicted RBP19.45■□□□□ 0.7
VPS26B-206ENST00000531741 NOSTRINQ8IVI9 506 aa19.45■□□□□ 0.7
VPS26B-206ENST00000531741 TRIM22Q8IYM9 498 aa19.45■□□□□ 0.7
VPS26B-206ENST00000531741 MYL10Q9BUA6 226 aa19.45■□□□□ 0.7
VPS26B-206ENST00000531741 ANAPC4Q9UJX5 808 aa19.45■□□□□ 0.7
VPS26B-206ENST00000531741 ZNF831Q5JPB2 1677 aa19.44■□□□□ 0.7
VPS26B-206ENST00000531741 MYO1BO43795 1136 aa19.44■□□□□ 0.7
VPS26B-206ENST00000531741 WTAPQ15007 396 aa19.44■□□□□ 0.7
VPS26B-206ENST00000531741 PPP2R5BQ15173 497 aa19.44■□□□□ 0.7
VPS26B-206ENST00000531741 RTN1Q16799 776 aa19.44■□□□□ 0.7
VPS26B-206ENST00000531741 FILIP1Q7Z7B0 1213 aa19.44■□□□□ 0.7
VPS26B-206ENST00000531741 FOXP1Q9H334 677 aaPredicted RBP19.44■□□□□ 0.7
VPS26B-206ENST00000531741 NIP7Q9Y221 180 aaKnown RBP eCLIP19.44■□□□□ 0.7
VPS26B-206ENST00000531741 PRKAB2O43741 272 aa19.44■□□□□ 0.7
VPS26B-206ENST00000531741 KCNJ6P48051 423 aa19.44■□□□□ 0.7
VPS26B-206ENST00000531741 ITPK1Q13572 414 aa19.44■□□□□ 0.7
VPS26B-206ENST00000531741 ARID5BQ14865 1188 aa19.44■□□□□ 0.7
VPS26B-206ENST00000531741 SAFBQ15424 915 aaKnown RBP eCLIP19.44■□□□□ 0.7
VPS26B-206ENST00000531741 NYAP1Q6ZVC0 841 aa19.44■□□□□ 0.7
VPS26B-206ENST00000531741 CCDC150Q8NCX0 1101 aa19.44■□□□□ 0.7
VPS26B-206ENST00000531741 ANKRD7Q92527 254 aa19.44■□□□□ 0.7
VPS26B-206ENST00000531741 A0A1B0GUL6 1792 aa19.43■□□□□ 0.7
VPS26B-206ENST00000531741 ERICH2A1L162 156 aa19.43■□□□□ 0.7
VPS26B-206ENST00000531741 CLEC4GQ6UXB4 293 aa19.43■□□□□ 0.7
VPS26B-206ENST00000531741 TSC1Q92574 1164 aa19.43■□□□□ 0.7
VPS26B-206ENST00000531741 LRP2BPQ9P2M1 347 aa19.43■□□□□ 0.7
VPS26B-206ENST00000531741 ZNF652Q9Y2D9 606 aa19.43■□□□□ 0.7
VPS26B-206ENST00000531741 COL5A3P25940 1745 aaPredicted RBP19.42■□□□□ 0.7
VPS26B-206ENST00000531741 DEXIO95424 95 aa19.42■□□□□ 0.7
VPS26B-206ENST00000531741 KRI1Q8N9T8 703 aaKnown RBP19.42■□□□□ 0.7
VPS26B-206ENST00000531741 FBXW7Q969H0 707 aa19.42■□□□□ 0.7
VPS26B-206ENST00000531741 XPO4Q9C0E2 1151 aaKnown RBP19.42■□□□□ 0.7
VPS26B-206ENST00000531741 MORC2Q9Y6X9 1032 aaPredicted RBP19.42■□□□□ 0.7
VPS26B-206ENST00000531741 BIN1O00499 593 aa19.42■□□□□ 0.7
VPS26B-206ENST00000531741 RILPL1Q5EBL4 403 aa19.42■□□□□ 0.7
VPS26B-206ENST00000531741 CRACR2BQ8N4Y2 399 aaPredicted RBP19.42■□□□□ 0.7
VPS26B-206ENST00000531741 CCDC94Q9BW85 323 aaPredicted RBP19.42■□□□□ 0.7
VPS26B-206ENST00000531741 IFNKQ9P0W0 207 aa19.42■□□□□ 0.7
VPS26B-206ENST00000531741 FAM177BA6PVY3 158 aa19.41■□□□□ 0.7
VPS26B-206ENST00000531741 RGL2O15211 777 aa19.41■□□□□ 0.7
VPS26B-206ENST00000531741 PPARAQ07869 468 aa19.41■□□□□ 0.7
VPS26B-206ENST00000531741 KRBA2Q6ZNG9 492 aa19.41■□□□□ 0.7
VPS26B-206ENST00000531741 MARCH10Q8NA82 808 aaPredicted RBP19.41■□□□□ 0.7
VPS26B-206ENST00000531741 SMARCC1Q92922 1105 aaPredicted RBP19.41■□□□□ 0.7
VPS26B-206ENST00000531741 NOL10Q9BSC4 688 aaKnown RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms