RNA–Protein interactions for RNA: ENST00000530721.5

RPS3-216, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-216ENST00000530721 PDE4DIPQ5VU43 2346 aa15.78■□□□□ 0.12
RPS3-216ENST00000530721 ZBTB7BO15156 539 aaPredicted RBP15.77■□□□□ 0.12
RPS3-216ENST00000530721 LDHCP07864 332 aa15.77■□□□□ 0.12
RPS3-216ENST00000530721 RLBP1P12271 317 aa15.77■□□□□ 0.12
RPS3-216ENST00000530721 MCAMP43121 646 aa15.77■□□□□ 0.12
RPS3-216ENST00000530721 OS9Q13438 667 aaPredicted RBP15.77■□□□□ 0.12
RPS3-216ENST00000530721 PICALMQ13492 652 aa15.77■□□□□ 0.12
RPS3-216ENST00000530721 TNNI3KQ59H18 835 aa15.77■□□□□ 0.12
RPS3-216ENST00000530721 SH3BP5LQ7L8J4 393 aa15.77■□□□□ 0.12
RPS3-216ENST00000530721 ZNF384Q8TF68 577 aa15.77■□□□□ 0.12
RPS3-216ENST00000530721 NSUN4Q96CB9 384 aaKnown RBP15.77■□□□□ 0.12
RPS3-216ENST00000530721 C1orf115Q9H7X2 142 aa15.77■□□□□ 0.12
RPS3-216ENST00000530721 DDX4Q9NQI0 724 aaKnown RBP15.77■□□□□ 0.12
RPS3-216ENST00000530721 FPGT-TNNI3KV9GXZ4 949 aa15.77■□□□□ 0.12
RPS3-216ENST00000530721 TNRC18O15417 2968 aaPredicted RBP15.77■□□□□ 0.11
RPS3-216ENST00000530721 PHF20L1A8MW92 1017 aa15.76■□□□□ 0.11
RPS3-216ENST00000530721 SURF6O75683 361 aaKnown RBP15.76■□□□□ 0.11
RPS3-216ENST00000530721 MAP4K4O95819 1239 aaPredicted RBP15.76■□□□□ 0.11
RPS3-216ENST00000530721 RHBDL3P58872 404 aa15.76■□□□□ 0.11
RPS3-216ENST00000530721 CAP1Q01518 475 aa15.76■□□□□ 0.11
RPS3-216ENST00000530721 MAP3K10Q02779 954 aa15.76■□□□□ 0.11
RPS3-216ENST00000530721 TBC1D9Q6ZT07 1266 aa15.76■□□□□ 0.11
RPS3-216ENST00000530721 ANKRD23Q86SG2 305 aa15.76■□□□□ 0.11
RPS3-216ENST00000530721 RAI14Q9P0K7 980 aa15.76■□□□□ 0.11
RPS3-216ENST00000530721 DDTLA6NHG4 134 aaPredicted RBP15.75■□□□□ 0.11
RPS3-216ENST00000530721 NPM3O75607 178 aaKnown RBP15.75■□□□□ 0.11
RPS3-216ENST00000530721 CCDC158Q5M9N0 1113 aa15.75■□□□□ 0.11
RPS3-216ENST00000530721 TTC39AQ5SRH9 613 aa15.75■□□□□ 0.11
RPS3-216ENST00000530721 SCYL3Q8IZE3 742 aa15.75■□□□□ 0.11
RPS3-216ENST00000530721 PICK1Q9NRD5 415 aa15.75■□□□□ 0.11
RPS3-216ENST00000530721 LRP2BPQ9P2M1 347 aa15.75■□□□□ 0.11
RPS3-216ENST00000530721 NOP58Q9Y2X3 529 aaKnown RBP15.75■□□□□ 0.11
RPS3-216ENST00000530721 CENPFP49454 3210 aa15.75■□□□□ 0.11
RPS3-216ENST00000530721 CXCL11O14625 94 aa15.74■□□□□ 0.11
RPS3-216ENST00000530721 KIF22Q14807 665 aa15.74■□□□□ 0.11
RPS3-216ENST00000530721 ARMC5Q96C12 935 aa15.74■□□□□ 0.11
RPS3-216ENST00000530721 DBNDD2Q9BQY9 259 aa15.74■□□□□ 0.11
RPS3-216ENST00000530721 PDHXO00330 501 aa15.73■□□□□ 0.11
RPS3-216ENST00000530721 CTNND1O60716 968 aaKnown RBP15.73■□□□□ 0.11
RPS3-216ENST00000530721 PTPRAP18433 802 aa15.73■□□□□ 0.11
RPS3-216ENST00000530721 LACTBP83111 547 aaPredicted RBP15.73■□□□□ 0.11
RPS3-216ENST00000530721 MOGSQ13724 837 aa15.73■□□□□ 0.11
RPS3-216ENST00000530721 ZNF512BQ96KM6 892 aaPredicted RBP15.73■□□□□ 0.11
RPS3-216ENST00000530721 ZHX2Q9Y6X8 837 aa15.73■□□□□ 0.11
RPS3-216ENST00000530721 COL2A1P02458 1487 aaPredicted RBP15.72■□□□□ 0.11
RPS3-216ENST00000530721 TBC1D12O60347 775 aa15.72■□□□□ 0.11
RPS3-216ENST00000530721 CEP85Q6P2H3 762 aa15.72■□□□□ 0.11
RPS3-216ENST00000530721 C17orf99Q6UX52 265 aa15.72■□□□□ 0.11
RPS3-216ENST00000530721 NOL10Q9BSC4 688 aaKnown RBP15.72■□□□□ 0.11
RPS3-216ENST00000530721 SNRKQ9NRH2 765 aa15.72■□□□□ 0.11
RPS3-216ENST00000530721 KIAA0100Q14667 2235 aaKnown RBP15.72■□□□□ 0.11
RPS3-216ENST00000530721 A0A0G2JLL6 359 aaPredicted RBP15.71■□□□□ 0.11
RPS3-216ENST00000530721 IGSF3O75054 1194 aa15.71■□□□□ 0.11
RPS3-216ENST00000530721 GNRH1P01148 92 aa15.71■□□□□ 0.11
RPS3-216ENST00000530721 NAA16Q6N069 864 aaPredicted RBP15.71■□□□□ 0.11
RPS3-216ENST00000530721 FASTKD5Q7L8L6 764 aaKnown RBP15.71■□□□□ 0.11
RPS3-216ENST00000530721 PRRT2Q7Z6L0 340 aaPredicted RBP15.71■□□□□ 0.11
RPS3-216ENST00000530721 TEX11Q8IYF3 940 aa15.71■□□□□ 0.11
RPS3-216ENST00000530721 PANK1Q8TE04 598 aa15.71■□□□□ 0.11
RPS3-216ENST00000530721 PARK7Q99497 189 aaKnown RBP15.71■□□□□ 0.11
RPS3-216ENST00000530721 ARHGAP39Q9C0H5 1083 aa15.71■□□□□ 0.11
RPS3-216ENST00000530721 OSBPL5Q9H0X9 879 aaPredicted RBP15.71■□□□□ 0.11
RPS3-216ENST00000530721 CPA4Q9UI42 421 aa15.71■□□□□ 0.11
RPS3-216ENST00000530721 DBNLQ9UJU6 430 aaKnown RBP15.71■□□□□ 0.11
RPS3-216ENST00000530721 AFG3L2Q9Y4W6 797 aa15.71■□□□□ 0.11
RPS3-216ENST00000530721 PTCH2Q9Y6C5 1203 aa15.71■□□□□ 0.11
RPS3-216ENST00000530721 DOCK1Q14185 1865 aa15.71■□□□□ 0.11
RPS3-216ENST00000530721 ADGRA2Q96PE1 1338 aa15.7■□□□□ 0.1
RPS3-216ENST00000530721 MAST2Q6P0Q8 1798 aa15.7■□□□□ 0.1
RPS3-216ENST00000530721 BAG3O95817 575 aa15.7■□□□□ 0.1
RPS3-216ENST00000530721 CYP2E1P05181 493 aaPredicted RBP15.7■□□□□ 0.1
RPS3-216ENST00000530721 SLURP2P0DP57 97 aa15.7■□□□□ 0.1
RPS3-216ENST00000530721 MS4A1P11836 297 aa15.7■□□□□ 0.1
RPS3-216ENST00000530721 PLCG2P16885 1265 aa15.7■□□□□ 0.1
RPS3-216ENST00000530721 SLC9C1Q4G0N8 1177 aa15.7■□□□□ 0.1
RPS3-216ENST00000530721 GPAT2Q6NUI2 795 aa15.7■□□□□ 0.1
RPS3-216ENST00000530721 NBPF11Q86T75 865 aa15.7■□□□□ 0.1
RPS3-216ENST00000530721 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.7■□□□□ 0.1
RPS3-216ENST00000530721 POTEFA5A3E0 1075 aa15.69■□□□□ 0.1
RPS3-216ENST00000530721 PRMT2P55345 433 aa15.69■□□□□ 0.1
RPS3-216ENST00000530721 ERC1Q8IUD2 1116 aa15.69■□□□□ 0.1
RPS3-216ENST00000530721 SH3RF3Q8TEJ3 882 aaPredicted RBP15.69■□□□□ 0.1
RPS3-216ENST00000530721 EAF2Q96CJ1 260 aaPredicted RBP15.69■□□□□ 0.1
RPS3-216ENST00000530721 ZNF333Q96JL9 665 aa15.69■□□□□ 0.1
RPS3-216ENST00000530721 CCDC8Q9H0W5 538 aaPredicted RBP15.69■□□□□ 0.1
RPS3-216ENST00000530721 AATFQ9NY61 560 aaKnown RBP eCLIP15.69■□□□□ 0.12e-7■■■■■ 33.7
RPS3-216ENST00000530721 TLR7Q9NYK1 1049 aaKnown RBP15.69■□□□□ 0.1
RPS3-216ENST00000530721 BRCA2P51587 3418 aa15.68■□□□□ 0.1
RPS3-216ENST00000530721 RBBP6Q7Z6E9 1792 aaKnown RBP15.68■□□□□ 0.1
RPS3-216ENST00000530721 FAM196BA6NMK8 535 aa15.68■□□□□ 0.1
RPS3-216ENST00000530721 ZAP70P43403 619 aa15.68■□□□□ 0.1
RPS3-216ENST00000530721 PPP4CP60510 307 aa15.68■□□□□ 0.1
RPS3-216ENST00000530721 SLC45A1Q9Y2W3 748 aa15.68■□□□□ 0.1
RPS3-216ENST00000530721 PTPRFP10586 1907 aa15.68■□□□□ 0.1
RPS3-216ENST00000530721 ZSWIM8A7E2V4 1837 aa15.68■□□□□ 0.1
RPS3-216ENST00000530721 PHIPQ8WWQ0 1821 aa15.67■□□□□ 0.1
RPS3-216ENST00000530721 TRIM75PA6NK02 468 aa15.67■□□□□ 0.1
RPS3-216ENST00000530721 CYP2C8P10632 490 aa15.67■□□□□ 0.1
RPS3-216ENST00000530721 HOXD10P28358 340 aa15.67■□□□□ 0.1
RPS3-216ENST00000530721 PSMC4P43686 418 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms