RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 GPR75-ASB3A0A0A6YYF3 556 aa25.72■■□□□ 1.71
SMPD1-204ENST00000530395 POLA2Q14181 598 aa25.72■■□□□ 1.71
SMPD1-204ENST00000530395 ANKRD23Q86SG2 305 aa25.72■■□□□ 1.71
SMPD1-204ENST00000530395 PICK1Q9NRD5 415 aa25.72■■□□□ 1.71
SMPD1-204ENST00000530395 MAST2Q6P0Q8 1798 aa25.72■■□□□ 1.71
SMPD1-204ENST00000530395 MAP4K4O95819 1239 aaPredicted RBP25.71■■□□□ 1.71
SMPD1-204ENST00000530395 PI16Q6UXB8 463 aa25.71■■□□□ 1.71
SMPD1-204ENST00000530395 ITPRIPQ8IWB1 547 aa25.71■■□□□ 1.71
SMPD1-204ENST00000530395 SSH3Q8TE77 659 aa25.71■■□□□ 1.71
SMPD1-204ENST00000530395 ARMC5Q96C12 935 aa25.71■■□□□ 1.71
SMPD1-204ENST00000530395 GPR108Q9NPR9 543 aa25.71■■□□□ 1.71
SMPD1-204ENST00000530395 RAI14Q9P0K7 980 aa25.71■■□□□ 1.71
SMPD1-204ENST00000530395 ATP8B2P98198 1209 aa25.7■■□□□ 1.7
SMPD1-204ENST00000530395 CAP1Q01518 475 aa25.7■■□□□ 1.7
SMPD1-204ENST00000530395 SH3BP5LQ7L8J4 393 aa25.7■■□□□ 1.7
SMPD1-204ENST00000530395 SCYL3Q8IZE3 742 aa25.7■■□□□ 1.7
SMPD1-204ENST00000530395 NSUN4Q96CB9 384 aaKnown RBP25.7■■□□□ 1.7
SMPD1-204ENST00000530395 DDX4Q9NQI0 724 aaKnown RBP25.7■■□□□ 1.7
SMPD1-204ENST00000530395 PHF20L1A8MW92 1017 aa25.69■■□□□ 1.7
SMPD1-204ENST00000530395 PDHXO00330 501 aa25.69■■□□□ 1.7
SMPD1-204ENST00000530395 CXCL11O14625 94 aa25.69■■□□□ 1.7
SMPD1-204ENST00000530395 MCAMP43121 646 aa25.69■■□□□ 1.7
SMPD1-204ENST00000530395 TTC39AQ5SRH9 613 aa25.69■■□□□ 1.7
SMPD1-204ENST00000530395 TBC1D9Q6ZT07 1266 aa25.69■■□□□ 1.7
SMPD1-204ENST00000530395 C1orf115Q9H7X2 142 aa25.69■■□□□ 1.7
SMPD1-204ENST00000530395 LRP2BPQ9P2M1 347 aa25.69■■□□□ 1.7
SMPD1-204ENST00000530395 ZSWIM8A7E2V4 1837 aa25.69■■□□□ 1.7
SMPD1-204ENST00000530395 ZBED9Q6R2W3 1325 aa25.68■■□□□ 1.7
SMPD1-204ENST00000530395 DDTLA6NHG4 134 aaPredicted RBP25.68■■□□□ 1.7
SMPD1-204ENST00000530395 NPM3O75607 178 aaKnown RBP25.68■■□□□ 1.7
SMPD1-204ENST00000530395 SURF6O75683 361 aaKnown RBP25.68■■□□□ 1.7
SMPD1-204ENST00000530395 RHBDL3P58872 404 aa25.68■■□□□ 1.7
SMPD1-204ENST00000530395 LACTBP83111 547 aaPredicted RBP25.68■■□□□ 1.7
SMPD1-204ENST00000530395 TNNI3KQ59H18 835 aa25.68■■□□□ 1.7
SMPD1-204ENST00000530395 CCDC158Q5M9N0 1113 aa25.68■■□□□ 1.7
SMPD1-204ENST00000530395 ZNF384Q8TF68 577 aa25.68■■□□□ 1.7
SMPD1-204ENST00000530395 FPGT-TNNI3KV9GXZ4 949 aa25.68■■□□□ 1.7
SMPD1-204ENST00000530395 BRCA2P51587 3418 aa25.68■■□□□ 1.7
SMPD1-204ENST00000530395 KIAA0100Q14667 2235 aaKnown RBP25.68■■□□□ 1.7
SMPD1-204ENST00000530395 GNRH1P01148 92 aa25.67■■□□□ 1.7
SMPD1-204ENST00000530395 MAP3K10Q02779 954 aa25.67■■□□□ 1.7
SMPD1-204ENST00000530395 SLC9C1Q4G0N8 1177 aa25.67■■□□□ 1.7
SMPD1-204ENST00000530395 NBPF11Q86T75 865 aa25.67■■□□□ 1.7
SMPD1-204ENST00000530395 NOL10Q9BSC4 688 aaKnown RBP25.67■■□□□ 1.7
SMPD1-204ENST00000530395 PTCH2Q9Y6C5 1203 aa25.67■■□□□ 1.7
SMPD1-204ENST00000530395 ZHX2Q9Y6X8 837 aa25.67■■□□□ 1.7
SMPD1-204ENST00000530395 PTPRFP10586 1907 aa25.67■■□□□ 1.7
SMPD1-204ENST00000530395 COL2A1P02458 1487 aaPredicted RBP25.66■■□□□ 1.7
SMPD1-204ENST00000530395 C17orf99Q6UX52 265 aa25.66■■□□□ 1.7
SMPD1-204ENST00000530395 PARK7Q99497 189 aaKnown RBP25.66■■□□□ 1.7
SMPD1-204ENST00000530395 PHIPQ8WWQ0 1821 aa25.65■■□□□ 1.7
SMPD1-204ENST00000530395 CTNND1O60716 968 aaKnown RBP25.65■■□□□ 1.7
SMPD1-204ENST00000530395 PTPRAP18433 802 aa25.65■■□□□ 1.7
SMPD1-204ENST00000530395 MOGSQ13724 837 aa25.65■■□□□ 1.7
SMPD1-204ENST00000530395 PRPF38BQ5VTL8 546 aaKnown RBP25.65■■□□□ 1.7
SMPD1-204ENST00000530395 FASTKD5Q7L8L6 764 aaKnown RBP25.65■■□□□ 1.7
SMPD1-204ENST00000530395 DBNDD2Q9BQY9 259 aa25.65■■□□□ 1.7
SMPD1-204ENST00000530395 ARHGAP39Q9C0H5 1083 aa25.65■■□□□ 1.7
SMPD1-204ENST00000530395 CPA4Q9UI42 421 aa25.65■■□□□ 1.7
SMPD1-204ENST00000530395 POTEFA5A3E0 1075 aa25.64■■□□□ 1.7
SMPD1-204ENST00000530395 ZBTB7BO15156 539 aaPredicted RBP25.64■■□□□ 1.7
SMPD1-204ENST00000530395 RLBP1P12271 317 aa25.64■■□□□ 1.7
SMPD1-204ENST00000530395 PRMT2P55345 433 aa25.64■■□□□ 1.7
SMPD1-204ENST00000530395 ZNF333Q96JL9 665 aa25.64■■□□□ 1.7
SMPD1-204ENST00000530395 TMEM106CQ9BVX2 250 aa25.64■■□□□ 1.7
SMPD1-204ENST00000530395 ATAD5Q96QE3 1844 aa25.63■■□□□ 1.69
SMPD1-204ENST00000530395 MKI67P46013 3256 aaKnown RBP25.63■■□□□ 1.69
SMPD1-204ENST00000530395 A0A0G2JLL6 359 aaPredicted RBP25.63■■□□□ 1.69
SMPD1-204ENST00000530395 TBC1D12O60347 775 aa25.63■■□□□ 1.69
SMPD1-204ENST00000530395 PRRT2Q7Z6L0 340 aaPredicted RBP25.63■■□□□ 1.69
SMPD1-204ENST00000530395 TEX11Q8IYF3 940 aa25.63■■□□□ 1.69
SMPD1-204ENST00000530395 SNRKQ9NRH2 765 aa25.63■■□□□ 1.69
SMPD1-204ENST00000530395 NOP58Q9Y2X3 529 aaKnown RBP25.63■■□□□ 1.69
SMPD1-204ENST00000530395 ADGRA2Q96PE1 1338 aa25.63■■□□□ 1.69
SMPD1-204ENST00000530395 BAG3O95817 575 aa25.62■■□□□ 1.69
SMPD1-204ENST00000530395 NAA16Q6N069 864 aaPredicted RBP25.62■■□□□ 1.69
SMPD1-204ENST00000530395 OSBPL5Q9H0X9 879 aaPredicted RBP25.62■■□□□ 1.69
SMPD1-204ENST00000530395 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.62■■□□□ 1.69
SMPD1-204ENST00000530395 AFG3L2Q9Y4W6 797 aa25.62■■□□□ 1.69
SMPD1-204ENST00000530395 MYO5AQ9Y4I1 1855 aaKnown RBP25.62■■□□□ 1.69
SMPD1-204ENST00000530395 GPAT2Q6NUI2 795 aa25.61■■□□□ 1.69
SMPD1-204ENST00000530395 GADL1Q6ZQY3 521 aa25.61■■□□□ 1.69
SMPD1-204ENST00000530395 ZNF512BQ96KM6 892 aaPredicted RBP25.61■■□□□ 1.69
SMPD1-204ENST00000530395 FOCADQ5VW36 1801 aa25.6■■□□□ 1.69
SMPD1-204ENST00000530395 MGAMO43451 1857 aa25.6■■□□□ 1.69
SMPD1-204ENST00000530395 CDK5RAP2Q96SN8 1893 aa25.6■■□□□ 1.69
SMPD1-204ENST00000530395 IGSF3O75054 1194 aa25.6■■□□□ 1.69
SMPD1-204ENST00000530395 PLCG2P16885 1265 aa25.6■■□□□ 1.69
SMPD1-204ENST00000530395 HOXD10P28358 340 aa25.6■■□□□ 1.69
SMPD1-204ENST00000530395 PSMC4P43686 418 aa25.6■■□□□ 1.69
SMPD1-204ENST00000530395 SLURP2P0DP57 97 aa25.59■■□□□ 1.69
SMPD1-204ENST00000530395 SH3RF3Q8TEJ3 882 aaPredicted RBP25.59■■□□□ 1.69
SMPD1-204ENST00000530395 AATFQ9NY61 560 aaKnown RBP eCLIP25.59■■□□□ 1.69
SMPD1-204ENST00000530395 SLC45A1Q9Y2W3 748 aa25.59■■□□□ 1.69
SMPD1-204ENST00000530395 TRIM75PA6NK02 468 aa25.58■■□□□ 1.69
SMPD1-204ENST00000530395 ECM2O94769 699 aaPredicted RBP25.58■■□□□ 1.69
SMPD1-204ENST00000530395 FMNL1O95466 1100 aaPredicted RBP25.58■■□□□ 1.69
SMPD1-204ENST00000530395 CYP2E1P05181 493 aaPredicted RBP25.58■■□□□ 1.69
SMPD1-204ENST00000530395 CYP2C8P10632 490 aa25.58■■□□□ 1.69
SMPD1-204ENST00000530395 MS4A1P11836 297 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms