RNA–Protein interactions for RNA: ENST00000529577.5

SF3B2-207, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-207ENST00000529577 BCAR3O75815 825 aa25.43■■□□□ 1.66
SF3B2-207ENST00000529577 CYP2C8P10632 490 aa25.43■■□□□ 1.66
SF3B2-207ENST00000529577 ARHGAP45Q92619 1136 aa25.43■■□□□ 1.66
SF3B2-207ENST00000529577 PNMA6EA0A0J9YXQ4 647 aa25.42■■□□□ 1.66
SF3B2-207ENST00000529577 BCRP11274 1271 aa25.42■■□□□ 1.66
SF3B2-207ENST00000529577 TRIM27P14373 513 aa25.42■■□□□ 1.66
SF3B2-207ENST00000529577 OSBPP22059 807 aa25.42■■□□□ 1.66
SF3B2-207ENST00000529577 BTDP43251 543 aa25.42■■□□□ 1.66
SF3B2-207ENST00000529577 HMG20BQ9P0W2 317 aa25.42■■□□□ 1.66
SF3B2-207ENST00000529577 ABCF2Q9UG63 623 aa25.42■■□□□ 1.66
SF3B2-207ENST00000529577 PTPRAP18433 802 aa25.41■■□□□ 1.66
SF3B2-207ENST00000529577 PSMC4P43686 418 aa25.41■■□□□ 1.66
SF3B2-207ENST00000529577 MECOMQ03112 1051 aa25.41■■□□□ 1.66
SF3B2-207ENST00000529577 TBC1D9Q6ZT07 1266 aa25.41■■□□□ 1.66
SF3B2-207ENST00000529577 SCYL3Q8IZE3 742 aa25.41■■□□□ 1.66
SF3B2-207ENST00000529577 SRRDQ9UH36 339 aa25.41■■□□□ 1.66
SF3B2-207ENST00000529577 AFG3L2Q9Y4W6 797 aa25.41■■□□□ 1.66
SF3B2-207ENST00000529577 SIPA1L1O43166 1804 aa25.41■■□□□ 1.66
SF3B2-207ENST00000529577 MROH7-TTC4A0A0A0MT08 1334 aa25.4■■□□□ 1.66
SF3B2-207ENST00000529577 A0A0G2JLL6 359 aaPredicted RBP25.4■■□□□ 1.66
SF3B2-207ENST00000529577 RRP1BQ14684 758 aaKnown RBP25.4■■□□□ 1.66
SF3B2-207ENST00000529577 HABP4Q5JVS0 413 aaKnown RBP25.4■■□□□ 1.66
SF3B2-207ENST00000529577 PRRT2Q7Z6L0 340 aaPredicted RBP25.4■■□□□ 1.66
SF3B2-207ENST00000529577 GPR75-ASB3A0A0A6YYF3 556 aa25.39■■□□□ 1.66
SF3B2-207ENST00000529577 FAM196BA6NMK8 535 aa25.39■■□□□ 1.66
SF3B2-207ENST00000529577 CXCL11O14625 94 aa25.39■■□□□ 1.66
SF3B2-207ENST00000529577 TMEM106CQ9BVX2 250 aa25.39■■□□□ 1.66
SF3B2-207ENST00000529577 PCDH10Q9P2E7 1040 aa25.39■■□□□ 1.66
SF3B2-207ENST00000529577 ZHX2Q9Y6X8 837 aa25.39■■□□□ 1.66
SF3B2-207ENST00000529577 CCER2I3L3R5 266 aa25.38■■□□□ 1.65
SF3B2-207ENST00000529577 PICALMQ13492 652 aa25.38■■□□□ 1.65
SF3B2-207ENST00000529577 NBPF11Q86T75 865 aa25.38■■□□□ 1.65
SF3B2-207ENST00000529577 DZIP1Q86YF9 867 aaKnown RBP25.38■■□□□ 1.65
SF3B2-207ENST00000529577 GABRQQ9UN88 632 aa25.38■■□□□ 1.65
SF3B2-207ENST00000529577 MYO5AQ9Y4I1 1855 aaKnown RBP25.37■■□□□ 1.65
SF3B2-207ENST00000529577 GNAI3P08754 354 aa25.37■■□□□ 1.65
SF3B2-207ENST00000529577 ARHGEF6Q15052 776 aa25.37■■□□□ 1.65
SF3B2-207ENST00000529577 SLC4A8Q2Y0W8 1093 aa25.37■■□□□ 1.65
SF3B2-207ENST00000529577 NSUN4Q96CB9 384 aaKnown RBP25.37■■□□□ 1.65
SF3B2-207ENST00000529577 ATAD5Q96QE3 1844 aa25.36■■□□□ 1.65
SF3B2-207ENST00000529577 GNRH1P01148 92 aa25.36■■□□□ 1.65
SF3B2-207ENST00000529577 PRKCZQ05513 592 aa25.36■■□□□ 1.65
SF3B2-207ENST00000529577 KIF22Q14807 665 aa25.36■■□□□ 1.65
SF3B2-207ENST00000529577 ZGPATQ8N5A5 531 aaKnown RBP25.36■■□□□ 1.65
SF3B2-207ENST00000529577 CDK5RAP2Q96SN8 1893 aa25.35■■□□□ 1.65
SF3B2-207ENST00000529577 ARID4AP29374 1257 aaPredicted RBP25.35■■□□□ 1.65
SF3B2-207ENST00000529577 MCAMP43121 646 aa25.35■■□□□ 1.65
SF3B2-207ENST00000529577 PRMT2P55345 433 aa25.35■■□□□ 1.65
SF3B2-207ENST00000529577 CLUAP1Q96AJ1 413 aa25.35■■□□□ 1.65
SF3B2-207ENST00000529577 MVPQ14764 893 aaKnown RBP25.34■■□□□ 1.65
SF3B2-207ENST00000529577 ATF7IPQ6VMQ6 1270 aa25.34■■□□□ 1.65
SF3B2-207ENST00000529577 UBE2Q1Q7Z7E8 422 aa25.34■■□□□ 1.65
SF3B2-207ENST00000529577 ZSCAN29Q8IWY8 852 aaPredicted RBP25.34■■□□□ 1.65
SF3B2-207ENST00000529577 SPATA5Q8NB90 893 aa25.34■■□□□ 1.65
SF3B2-207ENST00000529577 NEUROD6Q96NK8 337 aa25.34■■□□□ 1.65
SF3B2-207ENST00000529577 MYPNQ86TC9 1320 aa25.34■■□□□ 1.65
SF3B2-207ENST00000529577 LOC285556D6RIA3 1793 aa25.33■■□□□ 1.65
SF3B2-207ENST00000529577 FMNL1O95466 1100 aaPredicted RBP25.33■■□□□ 1.65
SF3B2-207ENST00000529577 ERICH6Q7L0X2 663 aa25.33■■□□□ 1.65
SF3B2-207ENST00000529577 HDAC5Q9UQL6 1122 aa25.33■■□□□ 1.65
SF3B2-207ENST00000529577 AKAP2Q9Y2D5 859 aa25.33■■□□□ 1.65
SF3B2-207ENST00000529577 SZT2Q5T011 3432 aa25.33■■□□□ 1.65
SF3B2-207ENST00000529577 RANBP2P49792 3224 aaKnown RBP25.32■■□□□ 1.64
SF3B2-207ENST00000529577 TREML2Q5T2D2 321 aa25.32■■□□□ 1.64
SF3B2-207ENST00000529577 GADL1Q6ZQY3 521 aa25.32■■□□□ 1.64
SF3B2-207ENST00000529577 TMEM57Q8N5G2 664 aa25.32■■□□□ 1.64
SF3B2-207ENST00000529577 PARK7Q99497 189 aaKnown RBP25.32■■□□□ 1.64
SF3B2-207ENST00000529577 DOCK3Q8IZD9 2030 aa25.31■■□□□ 1.64
SF3B2-207ENST00000529577 CTNND1O60716 968 aaKnown RBP25.31■■□□□ 1.64
SF3B2-207ENST00000529577 GNAI2P04899 355 aa25.31■■□□□ 1.64
SF3B2-207ENST00000529577 GRK4P32298 578 aa25.31■■□□□ 1.64
SF3B2-207ENST00000529577 JAG1P78504 1218 aa25.31■■□□□ 1.64
SF3B2-207ENST00000529577 FRAT1Q92837 279 aaPredicted RBP25.31■■□□□ 1.64
SF3B2-207ENST00000529577 COLQQ9Y215 455 aaPredicted RBP25.31■■□□□ 1.64
SF3B2-207ENST00000529577 COL2A1P02458 1487 aaPredicted RBP25.3■■□□□ 1.64
SF3B2-207ENST00000529577 TRIM75PA6NK02 468 aa25.3■■□□□ 1.64
SF3B2-207ENST00000529577 TBC1D12O60347 775 aa25.3■■□□□ 1.64
SF3B2-207ENST00000529577 NPM3O75607 178 aaKnown RBP25.3■■□□□ 1.64
SF3B2-207ENST00000529577 POLA2Q14181 598 aa25.3■■□□□ 1.64
SF3B2-207ENST00000529577 SPTY2D1Q68D10 685 aaPredicted RBP25.3■■□□□ 1.64
SF3B2-207ENST00000529577 ADGRA1Q86SQ6 560 aa25.3■■□□□ 1.64
SF3B2-207ENST00000529577 PICK1Q9NRD5 415 aa25.3■■□□□ 1.64
SF3B2-207ENST00000529577 MAST2Q6P0Q8 1798 aa25.29■■□□□ 1.64
SF3B2-207ENST00000529577 FOCADQ5VW36 1801 aa25.29■■□□□ 1.64
SF3B2-207ENST00000529577 H0YGN5 161 aa25.29■■□□□ 1.64
SF3B2-207ENST00000529577 CCL5P13501 91 aa25.29■■□□□ 1.64
SF3B2-207ENST00000529577 FXR1P51114 621 aaKnown RBP eCLIP25.29■■□□□ 1.64
SF3B2-207ENST00000529577 SHROOM1Q2M3G4 852 aaPredicted RBP25.29■■□□□ 1.64
SF3B2-207ENST00000529577 SH3RF3Q8TEJ3 882 aaPredicted RBP25.29■■□□□ 1.64
SF3B2-207ENST00000529577 GCC1Q96CN9 775 aa25.29■■□□□ 1.64
SF3B2-207ENST00000529577 OSBPL5Q9H0X9 879 aaPredicted RBP25.29■■□□□ 1.64
SF3B2-207ENST00000529577 FASTKD5Q7L8L6 764 aaKnown RBP25.28■■□□□ 1.64
SF3B2-207ENST00000529577 RAET1EQ8TD07 263 aa25.28■■□□□ 1.64
SF3B2-207ENST00000529577 DBNDD2Q9BQY9 259 aa25.28■■□□□ 1.64
SF3B2-207ENST00000529577 SNRKQ9NRH2 765 aa25.28■■□□□ 1.64
SF3B2-207ENST00000529577 SLC45A1Q9Y2W3 748 aa25.28■■□□□ 1.64
SF3B2-207ENST00000529577 SLF2Q8IX21 1173 aa25.27■■□□□ 1.64
SF3B2-207ENST00000529577 UNC93B1Q9H1C4 597 aa25.27■■□□□ 1.64
SF3B2-207ENST00000529577 PLXNB2O15031 1838 aa25.27■■□□□ 1.64
SF3B2-207ENST00000529577 CEP290O15078 2479 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms