RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 ATF7IPQ6VMQ6 1270 aa19.3■□□□□ 0.68
CTSB-215ENST00000528965 FASTKD5Q7L8L6 764 aaKnown RBP19.3■□□□□ 0.68
CTSB-215ENST00000528965 NEUROD6Q96NK8 337 aa19.3■□□□□ 0.68
CTSB-215ENST00000528965 CPA4Q9UI42 421 aa19.3■□□□□ 0.68
CTSB-215ENST00000528965 TRIM27P14373 513 aa19.29■□□□□ 0.68
CTSB-215ENST00000528965 FRAT1Q92837 279 aaPredicted RBP19.29■□□□□ 0.68
CTSB-215ENST00000528965 MAP4K4O95819 1239 aaPredicted RBP19.28■□□□□ 0.68
CTSB-215ENST00000528965 LDHCP07864 332 aa19.28■□□□□ 0.68
CTSB-215ENST00000528965 G3BP1Q13283 466 aaKnown RBP eCLIP19.28■□□□□ 0.68
CTSB-215ENST00000528965 PICALMQ13492 652 aa19.28■□□□□ 0.68
CTSB-215ENST00000528965 ZFPM1Q8IX07 1006 aa19.28■□□□□ 0.68
CTSB-215ENST00000528965 ZHX2Q9Y6X8 837 aa19.28■□□□□ 0.68
CTSB-215ENST00000528965 ADGRA2Q96PE1 1338 aa19.27■□□□□ 0.68
CTSB-215ENST00000528965 PHF20L1A8MW92 1017 aa19.27■□□□□ 0.68
CTSB-215ENST00000528965 FMNL1O95466 1100 aaPredicted RBP19.27■□□□□ 0.68
CTSB-215ENST00000528965 PSMC4P43686 418 aa19.27■□□□□ 0.68
CTSB-215ENST00000528965 MECOMQ03112 1051 aa19.27■□□□□ 0.68
CTSB-215ENST00000528965 SPATA5Q8NB90 893 aa19.27■□□□□ 0.68
CTSB-215ENST00000528965 RAET1EQ8TD07 263 aa19.27■□□□□ 0.68
CTSB-215ENST00000528965 SH3TC2Q8TF17 1288 aa19.27■□□□□ 0.68
CTSB-215ENST00000528965 SRRDQ9UH36 339 aa19.27■□□□□ 0.68
CTSB-215ENST00000528965 GPR75-ASB3A0A0A6YYF3 556 aa19.26■□□□□ 0.67
CTSB-215ENST00000528965 A0A0G2JLL6 359 aaPredicted RBP19.26■□□□□ 0.67
CTSB-215ENST00000528965 CTNND1O60716 968 aaKnown RBP19.26■□□□□ 0.67
CTSB-215ENST00000528965 NPM3O75607 178 aaKnown RBP19.26■□□□□ 0.67
CTSB-215ENST00000528965 UQCRFS1P1P0C7P4 283 aa19.26■□□□□ 0.67
CTSB-215ENST00000528965 PTPRAP18433 802 aa19.26■□□□□ 0.67
CTSB-215ENST00000528965 FCGRTP55899 365 aa19.26■□□□□ 0.67
CTSB-215ENST00000528965 MOGSQ13724 837 aa19.26■□□□□ 0.67
CTSB-215ENST00000528965 PRRT2Q7Z6L0 340 aaPredicted RBP19.26■□□□□ 0.67
CTSB-215ENST00000528965 TRIM47Q96LD4 638 aa19.26■□□□□ 0.67
CTSB-215ENST00000528965 SLC45A1Q9Y2W3 748 aa19.26■□□□□ 0.67
CTSB-215ENST00000528965 MYPNQ86TC9 1320 aa19.25■□□□□ 0.67
CTSB-215ENST00000528965 COL2A1P02458 1487 aaPredicted RBP19.25■□□□□ 0.67
CTSB-215ENST00000528965 MYCP01106 439 aaPredicted RBP19.25■□□□□ 0.67
CTSB-215ENST00000528965 ARID4AP29374 1257 aaPredicted RBP19.25■□□□□ 0.67
CTSB-215ENST00000528965 MAP3K10Q02779 954 aa19.25■□□□□ 0.67
CTSB-215ENST00000528965 GADL1Q6ZQY3 521 aa19.25■□□□□ 0.67
CTSB-215ENST00000528965 NOL10Q9BSC4 688 aaKnown RBP19.25■□□□□ 0.67
CTSB-215ENST00000528965 DDX4Q9NQI0 724 aaKnown RBP19.25■□□□□ 0.67
CTSB-215ENST00000528965 HMG20BQ9P0W2 317 aa19.25■□□□□ 0.67
CTSB-215ENST00000528965 ZSWIM8A7E2V4 1837 aa19.25■□□□□ 0.67
CTSB-215ENST00000528965 DOCK1Q14185 1865 aa19.24■□□□□ 0.67
CTSB-215ENST00000528965 DDTLA6NHG4 134 aaPredicted RBP19.24■□□□□ 0.67
CTSB-215ENST00000528965 ECM2O94769 699 aaPredicted RBP19.24■□□□□ 0.67
CTSB-215ENST00000528965 OSBPP22059 807 aa19.24■□□□□ 0.67
CTSB-215ENST00000528965 GPAT2Q6NUI2 795 aa19.24■□□□□ 0.67
CTSB-215ENST00000528965 SH3BP5LQ7L8J4 393 aa19.24■□□□□ 0.67
CTSB-215ENST00000528965 CLUAP1Q96AJ1 413 aa19.24■□□□□ 0.67
CTSB-215ENST00000528965 RAI14Q9P0K7 980 aa19.24■□□□□ 0.67
CTSB-215ENST00000528965 TBC1D12O60347 775 aa19.23■□□□□ 0.67
CTSB-215ENST00000528965 BCAR3O75815 825 aa19.23■□□□□ 0.67
CTSB-215ENST00000528965 CYP2C8P10632 490 aa19.23■□□□□ 0.67
CTSB-215ENST00000528965 BCRP11274 1271 aa19.23■□□□□ 0.67
CTSB-215ENST00000528965 GRK4P32298 578 aa19.23■□□□□ 0.67
CTSB-215ENST00000528965 RHBDL3P58872 404 aa19.23■□□□□ 0.67
CTSB-215ENST00000528965 OS9Q13438 667 aaPredicted RBP19.23■□□□□ 0.67
CTSB-215ENST00000528965 ZKSCAN2Q63HK3 967 aa19.23■□□□□ 0.67
CTSB-215ENST00000528965 NKX2-3Q8TAU0 364 aa19.23■□□□□ 0.67
CTSB-215ENST00000528965 SMCR8Q8TEV9 937 aaPredicted RBP19.23■□□□□ 0.67
CTSB-215ENST00000528965 NSUN4Q96CB9 384 aaKnown RBP19.23■□□□□ 0.67
CTSB-215ENST00000528965 LRP2BPQ9P2M1 347 aa19.23■□□□□ 0.67
CTSB-215ENST00000528965 AFG3L2Q9Y4W6 797 aa19.23■□□□□ 0.67
CTSB-215ENST00000528965 CENPFP49454 3210 aa19.23■□□□□ 0.67
CTSB-215ENST00000528965 PNMA6EA0A0J9YXQ4 647 aa19.22■□□□□ 0.67
CTSB-215ENST00000528965 UBXN2AP68543 259 aa19.22■□□□□ 0.67
CTSB-215ENST00000528965 TBC1D2Q9BYX2 928 aa19.22■□□□□ 0.67
CTSB-215ENST00000528965 OSBPL5Q9H0X9 879 aaPredicted RBP19.22■□□□□ 0.67
CTSB-215ENST00000528965 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.22■□□□□ 0.673e-7■□□□□ 9.8
CTSB-215ENST00000528965 TRIM75PA6NK02 468 aa19.21■□□□□ 0.67
CTSB-215ENST00000528965 CTGFP29279 349 aa19.21■□□□□ 0.67
CTSB-215ENST00000528965 PI16Q6UXB8 463 aa19.21■□□□□ 0.67
CTSB-215ENST00000528965 SLAIN1Q8ND83 568 aa19.21■□□□□ 0.67
CTSB-215ENST00000528965 GPR108Q9NPR9 543 aa19.21■□□□□ 0.67
CTSB-215ENST00000528965 BIN2Q9UBW5 565 aaPredicted RBP19.21■□□□□ 0.67
CTSB-215ENST00000528965 PNMA3Q9UL41 463 aa19.21■□□□□ 0.67
CTSB-215ENST00000528965 MAST2Q6P0Q8 1798 aa19.2■□□□□ 0.66
CTSB-215ENST00000528965 PLCG2P16885 1265 aa19.2■□□□□ 0.66
CTSB-215ENST00000528965 MCAMP43121 646 aa19.2■□□□□ 0.66
CTSB-215ENST00000528965 PRKCZQ05513 592 aa19.2■□□□□ 0.66
CTSB-215ENST00000528965 CCDC158Q5M9N0 1113 aa19.2■□□□□ 0.66
CTSB-215ENST00000528965 TTC39AQ5SRH9 613 aa19.2■□□□□ 0.66
CTSB-215ENST00000528965 DIEXFQ68CQ4 756 aaKnown RBP19.2■□□□□ 0.66
CTSB-215ENST00000528965 TBC1D9Q6ZT07 1266 aa19.2■□□□□ 0.66
CTSB-215ENST00000528965 FTSJ3Q8IY81 847 aaKnown RBP19.2■□□□□ 0.66
CTSB-215ENST00000528965 TEX11Q8IYF3 940 aa19.2■□□□□ 0.66
CTSB-215ENST00000528965 AGTPBP1Q9UPW5 1226 aa19.2■□□□□ 0.66
CTSB-215ENST00000528965 IGSF3O75054 1194 aa19.19■□□□□ 0.66
CTSB-215ENST00000528965 BAG3O95817 575 aa19.19■□□□□ 0.66
CTSB-215ENST00000528965 TMEM57Q8N5G2 664 aa19.19■□□□□ 0.66
CTSB-215ENST00000528965 PROCA1Q8NCQ7 364 aaPredicted RBP19.19■□□□□ 0.66
CTSB-215ENST00000528965 ZNF384Q8TF68 577 aa19.19■□□□□ 0.66
CTSB-215ENST00000528965 HERC5Q9UII4 1024 aaKnown RBP19.19■□□□□ 0.66
CTSB-215ENST00000528965 TNNQ9UQP3 1299 aa19.19■□□□□ 0.66
CTSB-215ENST00000528965 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.19■□□□□ 0.66
CTSB-215ENST00000528965 MKI67P46013 3256 aaKnown RBP19.18■□□□□ 0.66
CTSB-215ENST00000528965 PABPC4Q13310 644 aaKnown RBP eCLIP19.18■□□□□ 0.66
CTSB-215ENST00000528965 TNNI3KQ59H18 835 aa19.18■□□□□ 0.66
CTSB-215ENST00000528965 HABP4Q5JVS0 413 aaKnown RBP19.18■□□□□ 0.66
CTSB-215ENST00000528965 FPGT-TNNI3KV9GXZ4 949 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 464 ms