RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 ANKRD23Q86SG2 305 aa19.2■□□□□ 0.66
CLNS1A-210ENST00000528364 ZSCAN29Q8IWY8 852 aaPredicted RBP19.2■□□□□ 0.66
CLNS1A-210ENST00000528364 ZCCHC17Q9NP64 241 aaKnown RBP19.2■□□□□ 0.66
CLNS1A-210ENST00000528364 ATRNL1Q5VV63 1379 aa19.19■□□□□ 0.66
CLNS1A-210ENST00000528364 ARHGEF6Q15052 776 aa19.19■□□□□ 0.66
CLNS1A-210ENST00000528364 GORABQ5T7V8 394 aa19.19■□□□□ 0.66
CLNS1A-210ENST00000528364 MIER1Q8N108 512 aa19.19■□□□□ 0.66
CLNS1A-210ENST00000528364 ZNF333Q96JL9 665 aa19.19■□□□□ 0.66
CLNS1A-210ENST00000528364 ZHX2Q9Y6X8 837 aa19.19■□□□□ 0.66
CLNS1A-210ENST00000528364 PDS5AQ29RF7 1337 aaKnown RBP19.19■□□□□ 0.66
CLNS1A-210ENST00000528364 HTTP42858 3142 aa19.18■□□□□ 0.66
CLNS1A-210ENST00000528364 GPR75-ASB3A0A0A6YYF3 556 aa19.18■□□□□ 0.66
CLNS1A-210ENST00000528364 RHBDL3P58872 404 aa19.18■□□□□ 0.66
CLNS1A-210ENST00000528364 KIF22Q14807 665 aa19.18■□□□□ 0.66
CLNS1A-210ENST00000528364 GPAT2Q6NUI2 795 aa19.18■□□□□ 0.66
CLNS1A-210ENST00000528364 SPATA5Q8NB90 893 aa19.18■□□□□ 0.66
CLNS1A-210ENST00000528364 SH3TC2Q8TF17 1288 aa19.18■□□□□ 0.66
CLNS1A-210ENST00000528364 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.18■□□□□ 0.66
CLNS1A-210ENST00000528364 MROH7-TTC4A0A0A0MT08 1334 aa19.18■□□□□ 0.66
CLNS1A-210ENST00000528364 RFX7Q2KHR2 1363 aa19.18■□□□□ 0.66
CLNS1A-210ENST00000528364 PTPRAP18433 802 aa19.17■□□□□ 0.66
CLNS1A-210ENST00000528364 MAP3K10Q02779 954 aa19.17■□□□□ 0.66
CLNS1A-210ENST00000528364 SLC9C1Q4G0N8 1177 aa19.17■□□□□ 0.66
CLNS1A-210ENST00000528364 ZKSCAN2Q63HK3 967 aa19.17■□□□□ 0.66
CLNS1A-210ENST00000528364 CCDC84Q86UT8 332 aaPredicted RBP19.17■□□□□ 0.66
CLNS1A-210ENST00000528364 SLF2Q8IX21 1173 aa19.17■□□□□ 0.66
CLNS1A-210ENST00000528364 SCYL3Q8IZE3 742 aa19.17■□□□□ 0.66
CLNS1A-210ENST00000528364 C1orf115Q9H7X2 142 aa19.17■□□□□ 0.66
CLNS1A-210ENST00000528364 ADGRA2Q96PE1 1338 aa19.17■□□□□ 0.66
CLNS1A-210ENST00000528364 CXCL11O14625 94 aa19.16■□□□□ 0.66
CLNS1A-210ENST00000528364 CYP2C8P10632 490 aa19.16■□□□□ 0.66
CLNS1A-210ENST00000528364 MCAMP43121 646 aa19.16■□□□□ 0.66
CLNS1A-210ENST00000528364 NSUN4Q96CB9 384 aaKnown RBP19.16■□□□□ 0.66
CLNS1A-210ENST00000528364 TMEM106CQ9BVX2 250 aa19.16■□□□□ 0.66
CLNS1A-210ENST00000528364 SNRKQ9NRH2 765 aa19.16■□□□□ 0.66
CLNS1A-210ENST00000528364 RAI14Q9P0K7 980 aa19.16■□□□□ 0.66
CLNS1A-210ENST00000528364 FAM196BA6NMK8 535 aa19.15■□□□□ 0.66
CLNS1A-210ENST00000528364 ARID4AP29374 1257 aaPredicted RBP19.15■□□□□ 0.66
CLNS1A-210ENST00000528364 PSMC4P43686 418 aa19.15■□□□□ 0.66
CLNS1A-210ENST00000528364 ATP8B2P98198 1209 aa19.15■□□□□ 0.66
CLNS1A-210ENST00000528364 HNRNPUQ00839 825 aaKnown RBP eCLIP19.15■□□□□ 0.66
CLNS1A-210ENST00000528364 POLA2Q14181 598 aa19.15■□□□□ 0.66
CLNS1A-210ENST00000528364 NBPF11Q86T75 865 aa19.15■□□□□ 0.66
CLNS1A-210ENST00000528364 TRIM47Q96LD4 638 aa19.15■□□□□ 0.66
CLNS1A-210ENST00000528364 PICK1Q9NRD5 415 aa19.15■□□□□ 0.66
CLNS1A-210ENST00000528364 AFG3L2Q9Y4W6 797 aa19.15■□□□□ 0.66
CLNS1A-210ENST00000528364 SLC4A8Q2Y0W8 1093 aa19.14■□□□□ 0.65
CLNS1A-210ENST00000528364 CTNND1O60716 968 aaKnown RBP19.13■□□□□ 0.65
CLNS1A-210ENST00000528364 FMNL1O95466 1100 aaPredicted RBP19.13■□□□□ 0.65
CLNS1A-210ENST00000528364 LDHCP07864 332 aa19.13■□□□□ 0.65
CLNS1A-210ENST00000528364 RLBP1P12271 317 aa19.13■□□□□ 0.65
CLNS1A-210ENST00000528364 GADL1Q6ZQY3 521 aa19.13■□□□□ 0.65
CLNS1A-210ENST00000528364 SSH3Q8TE77 659 aa19.13■□□□□ 0.65
CLNS1A-210ENST00000528364 DBNDD2Q9BQY9 259 aa19.13■□□□□ 0.65
CLNS1A-210ENST00000528364 DOCK2Q92608 1830 aa19.12■□□□□ 0.65
CLNS1A-210ENST00000528364 A0A0G2JLL6 359 aaPredicted RBP19.12■□□□□ 0.65
CLNS1A-210ENST00000528364 SURF6O75683 361 aaKnown RBP19.12■□□□□ 0.65
CLNS1A-210ENST00000528364 UQCRFS1P1P0C7P4 283 aa19.12■□□□□ 0.65
CLNS1A-210ENST00000528364 BCRP11274 1271 aa19.12■□□□□ 0.65
CLNS1A-210ENST00000528364 OSBPP22059 807 aa19.12■□□□□ 0.65
CLNS1A-210ENST00000528364 GSTO1P78417 241 aa19.12■□□□□ 0.65
CLNS1A-210ENST00000528364 RRP1BQ14684 758 aaKnown RBP19.12■□□□□ 0.65
CLNS1A-210ENST00000528364 TNNI3KQ59H18 835 aa19.12■□□□□ 0.65
CLNS1A-210ENST00000528364 PRRT2Q7Z6L0 340 aaPredicted RBP19.12■□□□□ 0.65
CLNS1A-210ENST00000528364 LRP2BPQ9P2M1 347 aa19.12■□□□□ 0.65
CLNS1A-210ENST00000528364 SRRDQ9UH36 339 aa19.12■□□□□ 0.65
CLNS1A-210ENST00000528364 FPGT-TNNI3KV9GXZ4 949 aa19.12■□□□□ 0.65
CLNS1A-210ENST00000528364 TRIM75PA6NK02 468 aa19.11■□□□□ 0.65
CLNS1A-210ENST00000528364 GNRH1P01148 92 aa19.11■□□□□ 0.65
CLNS1A-210ENST00000528364 OS9Q13438 667 aaPredicted RBP19.11■□□□□ 0.65
CLNS1A-210ENST00000528364 MTFR1Q15390 333 aa19.11■□□□□ 0.65
CLNS1A-210ENST00000528364 FASTKD5Q7L8L6 764 aaKnown RBP19.11■□□□□ 0.65
CLNS1A-210ENST00000528364 SH3RF3Q8TEJ3 882 aaPredicted RBP19.11■□□□□ 0.65
CLNS1A-210ENST00000528364 PARK7Q99497 189 aaKnown RBP19.11■□□□□ 0.65
CLNS1A-210ENST00000528364 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.11■□□□□ 0.65
CLNS1A-210ENST00000528364 ZBTB7BO15156 539 aaPredicted RBP19.1■□□□□ 0.65
CLNS1A-210ENST00000528364 TBC1D12O60347 775 aa19.1■□□□□ 0.65
CLNS1A-210ENST00000528364 NPM3O75607 178 aaKnown RBP19.1■□□□□ 0.65
CLNS1A-210ENST00000528364 TTC39AQ5SRH9 613 aa19.1■□□□□ 0.65
CLNS1A-210ENST00000528364 CENPFP49454 3210 aa19.1■□□□□ 0.65
CLNS1A-210ENST00000528364 RBBP6Q7Z6E9 1792 aaKnown RBP19.09■□□□□ 0.65
CLNS1A-210ENST00000528364 PRMT2P55345 433 aa19.09■□□□□ 0.65
CLNS1A-210ENST00000528364 ITPRIPQ8IWB1 547 aa19.09■□□□□ 0.65
CLNS1A-210ENST00000528364 TEX11Q8IYF3 940 aa19.09■□□□□ 0.65
CLNS1A-210ENST00000528364 OSBPL5Q9H0X9 879 aaPredicted RBP19.09■□□□□ 0.65
CLNS1A-210ENST00000528364 GPR108Q9NPR9 543 aa19.09■□□□□ 0.65
CLNS1A-210ENST00000528364 GABRQQ9UN88 632 aa19.09■□□□□ 0.65
CLNS1A-210ENST00000528364 CYP2E1P05181 493 aaPredicted RBP19.08■□□□□ 0.64
CLNS1A-210ENST00000528364 HOXD10P28358 340 aa19.08■□□□□ 0.64
CLNS1A-210ENST00000528364 CCDC158Q5M9N0 1113 aa19.08■□□□□ 0.64
CLNS1A-210ENST00000528364 ADGRA1Q86SQ6 560 aa19.08■□□□□ 0.64
CLNS1A-210ENST00000528364 RAET1EQ8TD07 263 aa19.08■□□□□ 0.64
CLNS1A-210ENST00000528364 CCDC8Q9H0W5 538 aaPredicted RBP19.08■□□□□ 0.64
CLNS1A-210ENST00000528364 AATFQ9NY61 560 aaKnown RBP eCLIP19.08■□□□□ 0.64
CLNS1A-210ENST00000528364 PHIPQ8WWQ0 1821 aa19.07■□□□□ 0.64
CLNS1A-210ENST00000528364 MYPNQ86TC9 1320 aa19.07■□□□□ 0.64
CLNS1A-210ENST00000528364 ZAP70P43403 619 aa19.07■□□□□ 0.64
CLNS1A-210ENST00000528364 PRKCZQ05513 592 aa19.07■□□□□ 0.64
CLNS1A-210ENST00000528364 SPP2Q13103 211 aa19.07■□□□□ 0.64
CLNS1A-210ENST00000528364 TREML2Q5T2D2 321 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms