RNA–Protein interactions for RNA: ENST00000528001.1

CNKSR1-211, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-211ENST00000528001 IREB2P48200 963 aaKnown RBP15.79■□□□□ 0.12
CNKSR1-211ENST00000528001 RGMBQ6NW40 437 aa15.79■□□□□ 0.12
CNKSR1-211ENST00000528001 SH3RF3Q8TEJ3 882 aaPredicted RBP15.79■□□□□ 0.12
CNKSR1-211ENST00000528001 CCDC102AQ96A19 550 aa15.79■□□□□ 0.12
CNKSR1-211ENST00000528001 DDX4Q9NQI0 724 aaKnown RBP15.79■□□□□ 0.12
CNKSR1-211ENST00000528001 THSD7BQ9C0I4 1608 aa15.79■□□□□ 0.12
CNKSR1-211ENST00000528001 FOCADQ5VW36 1801 aa15.78■□□□□ 0.12
CNKSR1-211ENST00000528001 FLT1P17948 1338 aa15.78■□□□□ 0.12
CNKSR1-211ENST00000528001 RNF113AO15541 343 aaKnown RBP15.78■□□□□ 0.12
CNKSR1-211ENST00000528001 TBC1D12O60347 775 aa15.78■□□□□ 0.12
CNKSR1-211ENST00000528001 USP2O75604 605 aaPredicted RBP15.78■□□□□ 0.12
CNKSR1-211ENST00000528001 JMYQ8N9B5 988 aa15.78■□□□□ 0.12
CNKSR1-211ENST00000528001 APPBP2Q92624 585 aa15.78■□□□□ 0.12
CNKSR1-211ENST00000528001 CRNKL1Q9BZJ0 848 aaKnown RBP15.78■□□□□ 0.12
CNKSR1-211ENST00000528001 MYH7P12883 1935 aa15.78■□□□□ 0.12
CNKSR1-211ENST00000528001 MAP2K2P36507 400 aa15.77■□□□□ 0.12
CNKSR1-211ENST00000528001 TCP10Q12799 353 aa15.77■□□□□ 0.12
CNKSR1-211ENST00000528001 METTL16Q86W50 562 aaKnown RBP15.77■□□□□ 0.12
CNKSR1-211ENST00000528001 ANKRD13AQ8IZ07 590 aa15.77■□□□□ 0.12
CNKSR1-211ENST00000528001 MIGA1Q8NAN2 632 aa15.77■□□□□ 0.12
CNKSR1-211ENST00000528001 CSRNP1Q96S65 589 aa15.77■□□□□ 0.12
CNKSR1-211ENST00000528001 ZNF341Q9BYN7 854 aa15.77■□□□□ 0.12
CNKSR1-211ENST00000528001 ZNF112Q9UJU3 913 aa15.77■□□□□ 0.12
CNKSR1-211ENST00000528001 ANGEL1Q9UNK9 670 aaKnown RBP15.77■□□□□ 0.12
CNKSR1-211ENST00000528001 DYNLL1P63167 89 aaKnown RBP15.76■□□□□ 0.11
CNKSR1-211ENST00000528001 NOGQ13253 232 aa15.76■□□□□ 0.11
CNKSR1-211ENST00000528001 PICALMQ13492 652 aa15.76■□□□□ 0.11
CNKSR1-211ENST00000528001 TTLL12Q14166 644 aaPredicted RBP15.76■□□□□ 0.11
CNKSR1-211ENST00000528001 SH3BP5LQ7L8J4 393 aa15.76■□□□□ 0.11
CNKSR1-211ENST00000528001 CDAN1Q8IWY9 1227 aa15.76■□□□□ 0.11
CNKSR1-211ENST00000528001 ZFPM1Q8IX07 1006 aa15.76■□□□□ 0.11
CNKSR1-211ENST00000528001 REM2Q8IYK8 340 aaPredicted RBP15.76■□□□□ 0.11
CNKSR1-211ENST00000528001 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.76■□□□□ 0.11
CNKSR1-211ENST00000528001 ATP8A2Q9NTI2 1148 aa15.76■□□□□ 0.11
CNKSR1-211ENST00000528001 PI4KBQ9UBF8 816 aa15.76■□□□□ 0.11
CNKSR1-211ENST00000528001 MKRN1Q9UHC7 482 aaKnown RBP15.76■□□□□ 0.11
CNKSR1-211ENST00000528001 HERC5Q9UII4 1024 aaKnown RBP15.76■□□□□ 0.11
CNKSR1-211ENST00000528001 WDR33Q9C0J8 1336 aaKnown RBP15.75■□□□□ 0.11
CNKSR1-211ENST00000528001 DDTLA6NHG4 134 aaPredicted RBP15.75■□□□□ 0.11
CNKSR1-211ENST00000528001 SLC10A3P09131 477 aa15.75■□□□□ 0.11
CNKSR1-211ENST00000528001 GNAT2P19087 354 aa15.75■□□□□ 0.11
CNKSR1-211ENST00000528001 PDE4AP27815 886 aa15.75■□□□□ 0.11
CNKSR1-211ENST00000528001 VEGFBP49765 207 aa15.75■□□□□ 0.11
CNKSR1-211ENST00000528001 TGFBRAP1Q8WUH2 860 aa15.75■□□□□ 0.11
CNKSR1-211ENST00000528001 AIDAQ96BJ3 306 aa15.75■□□□□ 0.11
CNKSR1-211ENST00000528001 CAPNS2Q96L46 248 aa15.75■□□□□ 0.11
CNKSR1-211ENST00000528001 FSD1Q9BTV5 496 aa15.75■□□□□ 0.11
CNKSR1-211ENST00000528001 CDK5RAP2Q96SN8 1893 aa15.74■□□□□ 0.11
CNKSR1-211ENST00000528001 FAM155AB1AL88 458 aaPredicted RBP15.74■□□□□ 0.11
CNKSR1-211ENST00000528001 UBE2Q2LH0YL09 131 aa15.74■□□□□ 0.11
CNKSR1-211ENST00000528001 ZBTB48P10074 688 aaPredicted RBP15.74■□□□□ 0.11
CNKSR1-211ENST00000528001 USP5P45974 858 aa15.74■□□□□ 0.11
CNKSR1-211ENST00000528001 ZNF157P51786 506 aaPredicted RBP15.74■□□□□ 0.11
CNKSR1-211ENST00000528001 MAP3K9P80192 1104 aa15.74■□□□□ 0.11
CNKSR1-211ENST00000528001 ZMYM1Q5SVZ6 1142 aa15.74■□□□□ 0.11
CNKSR1-211ENST00000528001 GIMAP6Q6P9H5 292 aa15.74■□□□□ 0.11
CNKSR1-211ENST00000528001 FOXP4Q8IVH2 680 aaPredicted RBP15.74■□□□□ 0.11
CNKSR1-211ENST00000528001 ZSCAN29Q8IWY8 852 aaPredicted RBP15.74■□□□□ 0.11
CNKSR1-211ENST00000528001 CCDC136Q96JN2 1154 aa15.74■□□□□ 0.11
CNKSR1-211ENST00000528001 PUS7LQ9H0K6 701 aaKnown RBP15.74■□□□□ 0.11
CNKSR1-211ENST00000528001 EHD4Q9H223 541 aa15.74■□□□□ 0.11
CNKSR1-211ENST00000528001 DDX60LQ5H9U9 1706 aaKnown RBP15.74■□□□□ 0.11
CNKSR1-211ENST00000528001 HIP1O00291 1037 aa15.73■□□□□ 0.11
CNKSR1-211ENST00000528001 MBD4O95243 580 aa15.73■□□□□ 0.11
CNKSR1-211ENST00000528001 HLA-DOAP06340 250 aa15.73■□□□□ 0.11
CNKSR1-211ENST00000528001 NOL9Q5SY16 702 aaKnown RBP15.73■□□□□ 0.11
CNKSR1-211ENST00000528001 CYP4F22Q6NT55 531 aa15.73■□□□□ 0.11
CNKSR1-211ENST00000528001 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.73■□□□□ 0.11
CNKSR1-211ENST00000528001 MOB2Q70IA6 237 aa15.73■□□□□ 0.11
CNKSR1-211ENST00000528001 TTC6Q86TZ1 520 aa15.73■□□□□ 0.11
CNKSR1-211ENST00000528001 RASAL3Q86YV0 1011 aa15.73■□□□□ 0.11
CNKSR1-211ENST00000528001 MAPKAPK5Q8IW41 473 aa15.73■□□□□ 0.11
CNKSR1-211ENST00000528001 LCORLQ8N3X6 602 aa15.73■□□□□ 0.11
CNKSR1-211ENST00000528001 OSBP2Q969R2 916 aa15.73■□□□□ 0.11
CNKSR1-211ENST00000528001 STRBPQ96SI9 672 aaKnown RBP15.73■□□□□ 0.11
CNKSR1-211ENST00000528001 HELLSQ9NRZ9 838 aa15.73■□□□□ 0.11
CNKSR1-211ENST00000528001 CSADQ9Y600 493 aa15.73■□□□□ 0.11
CNKSR1-211ENST00000528001 PHF20L1A8MW92 1017 aa15.72■□□□□ 0.11
CNKSR1-211ENST00000528001 TTC22Q5TAA0 569 aa15.72■□□□□ 0.11
CNKSR1-211ENST00000528001 SLC10A4Q96EP9 437 aa15.72■□□□□ 0.11
CNKSR1-211ENST00000528001 WRNIP1Q96S55 665 aa15.72■□□□□ 0.11
CNKSR1-211ENST00000528001 ARMT1Q9H993 441 aa15.72■□□□□ 0.11
CNKSR1-211ENST00000528001 DCP1AQ9NPI6 582 aaPredicted RBP15.72■□□□□ 0.11
CNKSR1-211ENST00000528001 GINM1Q9NU53 330 aa15.72■□□□□ 0.11
CNKSR1-211ENST00000528001 PPP4R2Q9NY27 417 aa15.72■□□□□ 0.11
CNKSR1-211ENST00000528001 LAMB1P07942 1786 aa15.72■□□□□ 0.11
CNKSR1-211ENST00000528001 TRIM6-TRIM34B2RNG4 842 aa15.71■□□□□ 0.11
CNKSR1-211ENST00000528001 CTNND1O60716 968 aaKnown RBP15.71■□□□□ 0.11
CNKSR1-211ENST00000528001 PRKG1Q13976 671 aa15.71■□□□□ 0.11
CNKSR1-211ENST00000528001 DDRGK1Q96HY6 314 aa15.71■□□□□ 0.11
CNKSR1-211ENST00000528001 OTOFQ9HC10 1997 aa15.7■□□□□ 0.1
CNKSR1-211ENST00000528001 SPDYE5A6NIY4 337 aa15.7■□□□□ 0.1
CNKSR1-211ENST00000528001 GPAA1O43292 621 aa15.7■□□□□ 0.1
CNKSR1-211ENST00000528001 INHBEP58166 350 aa15.7■□□□□ 0.1
CNKSR1-211ENST00000528001 MAP2K1Q02750 393 aaPredicted RBP15.7■□□□□ 0.1
CNKSR1-211ENST00000528001 VGLL4Q14135 290 aa15.7■□□□□ 0.1
CNKSR1-211ENST00000528001 SPRYD7Q5W111 196 aa15.7■□□□□ 0.1
CNKSR1-211ENST00000528001 PAXIP1Q6ZW49 1069 aaPredicted RBP15.7■□□□□ 0.1
CNKSR1-211ENST00000528001 MIGA2Q7L4E1 593 aa15.7■□□□□ 0.1
CNKSR1-211ENST00000528001 ERO1BQ86YB8 467 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms