RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 FPGT-TNNI3KV9GXZ4 949 aa17.44■□□□□ 0.38
CAPN1-212ENST00000527887 RFX7Q2KHR2 1363 aa17.43■□□□□ 0.38
CAPN1-212ENST00000527887 MYH13Q9UKX3 1938 aa17.43■□□□□ 0.38
CAPN1-212ENST00000527887 BTBD19C9JJ37 291 aa17.43■□□□□ 0.38
CAPN1-212ENST00000527887 MCAMP43121 646 aa17.43■□□□□ 0.38
CAPN1-212ENST00000527887 SOX10P56693 466 aa17.43■□□□□ 0.38
CAPN1-212ENST00000527887 ANKRD23Q86SG2 305 aa17.43■□□□□ 0.38
CAPN1-212ENST00000527887 ZSCAN29Q8IWY8 852 aaPredicted RBP17.43■□□□□ 0.38
CAPN1-212ENST00000527887 ZFPM1Q8IX07 1006 aa17.43■□□□□ 0.38
CAPN1-212ENST00000527887 RAI14Q9P0K7 980 aa17.43■□□□□ 0.38
CAPN1-212ENST00000527887 LRP2BPQ9P2M1 347 aa17.43■□□□□ 0.38
CAPN1-212ENST00000527887 PTPN22Q9Y2R2 807 aa17.43■□□□□ 0.38
CAPN1-212ENST00000527887 ATRNL1Q5VV63 1379 aa17.42■□□□□ 0.38
CAPN1-212ENST00000527887 PHF20L1A8MW92 1017 aa17.42■□□□□ 0.38
CAPN1-212ENST00000527887 TBC1D12O60347 775 aa17.42■□□□□ 0.38
CAPN1-212ENST00000527887 RLBP1P12271 317 aa17.42■□□□□ 0.38
CAPN1-212ENST00000527887 RHBDL3P58872 404 aa17.42■□□□□ 0.38
CAPN1-212ENST00000527887 TTC39AQ5SRH9 613 aa17.42■□□□□ 0.38
CAPN1-212ENST00000527887 PICK1Q9NRD5 415 aa17.42■□□□□ 0.38
CAPN1-212ENST00000527887 OTOFQ9HC10 1997 aa17.42■□□□□ 0.38
CAPN1-212ENST00000527887 CTNND1O60716 968 aaKnown RBP17.41■□□□□ 0.38
CAPN1-212ENST00000527887 BAG3O95817 575 aa17.41■□□□□ 0.38
CAPN1-212ENST00000527887 GNRH1P01148 92 aa17.41■□□□□ 0.38
CAPN1-212ENST00000527887 KIF22Q14807 665 aa17.41■□□□□ 0.38
CAPN1-212ENST00000527887 SH3BP5LQ7L8J4 393 aa17.41■□□□□ 0.38
CAPN1-212ENST00000527887 ERC1Q8IUD2 1116 aa17.41■□□□□ 0.38
CAPN1-212ENST00000527887 SCYL3Q8IZE3 742 aa17.41■□□□□ 0.38
CAPN1-212ENST00000527887 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.41■□□□□ 0.38
CAPN1-212ENST00000527887 ZNF384Q8TF68 577 aa17.41■□□□□ 0.38
CAPN1-212ENST00000527887 NOL10Q9BSC4 688 aaKnown RBP17.41■□□□□ 0.38
CAPN1-212ENST00000527887 PLCG2P16885 1265 aa17.4■□□□□ 0.38
CAPN1-212ENST00000527887 PICALMQ13492 652 aa17.4■□□□□ 0.38
CAPN1-212ENST00000527887 HSP90AB4PQ58FF6 505 aa17.4■□□□□ 0.38
CAPN1-212ENST00000527887 TMED8Q6PL24 325 aaPredicted RBP17.4■□□□□ 0.38
CAPN1-212ENST00000527887 PI16Q6UXB8 463 aa17.4■□□□□ 0.38
CAPN1-212ENST00000527887 TBC1D9Q6ZT07 1266 aa17.4■□□□□ 0.38
CAPN1-212ENST00000527887 FASTKD5Q7L8L6 764 aaKnown RBP17.4■□□□□ 0.38
CAPN1-212ENST00000527887 DBNDD2Q9BQY9 259 aa17.4■□□□□ 0.38
CAPN1-212ENST00000527887 CHMP4BQ9H444 224 aaKnown RBP17.4■□□□□ 0.38
CAPN1-212ENST00000527887 C1orf115Q9H7X2 142 aa17.4■□□□□ 0.38
CAPN1-212ENST00000527887 DDX4Q9NQI0 724 aaKnown RBP17.4■□□□□ 0.38
CAPN1-212ENST00000527887 DDTLA6NHG4 134 aaPredicted RBP17.39■□□□□ 0.37
CAPN1-212ENST00000527887 PRMT2P55345 433 aa17.39■□□□□ 0.37
CAPN1-212ENST00000527887 CEP85Q6P2H3 762 aa17.39■□□□□ 0.37
CAPN1-212ENST00000527887 ARMC5Q96C12 935 aa17.39■□□□□ 0.37
CAPN1-212ENST00000527887 HTTP42858 3142 aa17.38■□□□□ 0.37
CAPN1-212ENST00000527887 PDHXO00330 501 aa17.38■□□□□ 0.37
CAPN1-212ENST00000527887 PTPRAP18433 802 aa17.38■□□□□ 0.37
CAPN1-212ENST00000527887 PPP4CP60510 307 aa17.38■□□□□ 0.37
CAPN1-212ENST00000527887 NAA16Q6N069 864 aaPredicted RBP17.38■□□□□ 0.37
CAPN1-212ENST00000527887 C17orf99Q6UX52 265 aa17.38■□□□□ 0.37
CAPN1-212ENST00000527887 NBPF11Q86T75 865 aa17.38■□□□□ 0.37
CAPN1-212ENST00000527887 TBC1D2Q9BYX2 928 aa17.38■□□□□ 0.37
CAPN1-212ENST00000527887 DHX36Q9H2U1 1008 aaKnown RBP17.38■□□□□ 0.37
CAPN1-212ENST00000527887 ZHX2Q9Y6X8 837 aa17.38■□□□□ 0.37
CAPN1-212ENST00000527887 TNRC18O15417 2968 aaPredicted RBP17.38■□□□□ 0.37
CAPN1-212ENST00000527887 COL2A1P02458 1487 aaPredicted RBP17.37■□□□□ 0.37
CAPN1-212ENST00000527887 LACTBP83111 547 aaPredicted RBP17.37■□□□□ 0.37
CAPN1-212ENST00000527887 CERS3Q8IU89 383 aa17.37■□□□□ 0.37
CAPN1-212ENST00000527887 TEX11Q8IYF3 940 aa17.37■□□□□ 0.37
CAPN1-212ENST00000527887 PARK7Q99497 189 aaKnown RBP17.37■□□□□ 0.37
CAPN1-212ENST00000527887 OSBPL5Q9H0X9 879 aaPredicted RBP17.37■□□□□ 0.37
CAPN1-212ENST00000527887 SLC45A1Q9Y2W3 748 aa17.37■□□□□ 0.37
CAPN1-212ENST00000527887 AFG3L2Q9Y4W6 797 aa17.37■□□□□ 0.37
CAPN1-212ENST00000527887 A0A0G2JLL6 359 aaPredicted RBP17.36■□□□□ 0.37
CAPN1-212ENST00000527887 CYP2E1P05181 493 aaPredicted RBP17.36■□□□□ 0.37
CAPN1-212ENST00000527887 MOGSQ13724 837 aa17.36■□□□□ 0.37
CAPN1-212ENST00000527887 PRRT2Q7Z6L0 340 aaPredicted RBP17.36■□□□□ 0.37
CAPN1-212ENST00000527887 RPAP2Q8IXW5 612 aaPredicted RBP17.36■□□□□ 0.37
CAPN1-212ENST00000527887 PANK1Q8TE04 598 aa17.36■□□□□ 0.37
CAPN1-212ENST00000527887 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.36■□□□□ 0.37
CAPN1-212ENST00000527887 SNRKQ9NRH2 765 aa17.36■□□□□ 0.37
CAPN1-212ENST00000527887 PI4KBQ9UBF8 816 aa17.36■□□□□ 0.37
CAPN1-212ENST00000527887 HERC5Q9UII4 1024 aaKnown RBP17.36■□□□□ 0.37
CAPN1-212ENST00000527887 DBNLQ9UJU6 430 aaKnown RBP17.36■□□□□ 0.37
CAPN1-212ENST00000527887 DDX19BQ9UMR2 479 aa17.36■□□□□ 0.37
CAPN1-212ENST00000527887 MYH2Q9UKX2 1941 aa17.36■□□□□ 0.37
CAPN1-212ENST00000527887 HOXD10P28358 340 aa17.35■□□□□ 0.37
CAPN1-212ENST00000527887 EAF2Q96CJ1 260 aaPredicted RBP17.35■□□□□ 0.37
CAPN1-212ENST00000527887 YTHDC1Q96MU7 727 aaKnown RBP17.35■□□□□ 0.37
CAPN1-212ENST00000527887 HMMRO75330 724 aa17.34■□□□□ 0.37
CAPN1-212ENST00000527887 ZAP70P43403 619 aa17.34■□□□□ 0.37
CAPN1-212ENST00000527887 GPAT2Q6NUI2 795 aa17.34■□□□□ 0.37
CAPN1-212ENST00000527887 CCDC8Q9H0W5 538 aaPredicted RBP17.34■□□□□ 0.37
CAPN1-212ENST00000527887 CAP1Q01518 475 aa17.33■□□□□ 0.36
CAPN1-212ENST00000527887 SLC9C1Q4G0N8 1177 aa17.33■□□□□ 0.36
CAPN1-212ENST00000527887 FOXP4Q8IVH2 680 aaPredicted RBP17.33■□□□□ 0.36
CAPN1-212ENST00000527887 SH3RF3Q8TEJ3 882 aaPredicted RBP17.33■□□□□ 0.36
CAPN1-212ENST00000527887 AATFQ9NY61 560 aaKnown RBP eCLIP17.33■□□□□ 0.36
CAPN1-212ENST00000527887 ADGRA2Q96PE1 1338 aa17.32■□□□□ 0.36
CAPN1-212ENST00000527887 METTL16Q86W50 562 aaKnown RBP17.32■□□□□ 0.36
CAPN1-212ENST00000527887 ZNF333Q96JL9 665 aa17.32■□□□□ 0.36
CAPN1-212ENST00000527887 TMEM106CQ9BVX2 250 aa17.32■□□□□ 0.36
CAPN1-212ENST00000527887 GINM1Q9NU53 330 aa17.32■□□□□ 0.36
CAPN1-212ENST00000527887 ZBTB40Q9NUA8 1239 aa17.32■□□□□ 0.36
CAPN1-212ENST00000527887 CPA4Q9UI42 421 aa17.32■□□□□ 0.36
CAPN1-212ENST00000527887 EXOC6BQ9Y2D4 811 aa17.32■□□□□ 0.36
CAPN1-212ENST00000527887 PTCH2Q9Y6C5 1203 aa17.32■□□□□ 0.36
CAPN1-212ENST00000527887 AK9Q5TCS8 1911 aa17.31■□□□□ 0.36
CAPN1-212ENST00000527887 CAP2P40123 477 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms