RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 ZHX2Q9Y6X8 837 aa27.6■■■□□ 2.01
TRAPPC4-208ENST00000527680 CXCL11O14625 94 aa27.59■■■□□ 2.01
TRAPPC4-208ENST00000527680 LDHCP07864 332 aa27.59■■■□□ 2.01
TRAPPC4-208ENST00000527680 EN2P19622 333 aaPredicted RBP27.59■■■□□ 2.01
TRAPPC4-208ENST00000527680 SLC4A8Q2Y0W8 1093 aa27.59■■■□□ 2.01
TRAPPC4-208ENST00000527680 C17orf99Q6UX52 265 aa27.59■■■□□ 2.01
TRAPPC4-208ENST00000527680 TBC1D9Q6ZT07 1266 aa27.59■■■□□ 2.01
TRAPPC4-208ENST00000527680 RAI14Q9P0K7 980 aa27.59■■■□□ 2.01
TRAPPC4-208ENST00000527680 MROH7-TTC4A0A0A0MT08 1334 aa27.59■■■□□ 2.01
TRAPPC4-208ENST00000527680 DDTLA6NHG4 134 aaPredicted RBP27.58■■■□□ 2.01
TRAPPC4-208ENST00000527680 PHF20L1A8MW92 1017 aa27.58■■■□□ 2.01
TRAPPC4-208ENST00000527680 GNRH1P01148 92 aa27.58■■■□□ 2.01
TRAPPC4-208ENST00000527680 GSTO1P78417 241 aa27.58■■■□□ 2.01
TRAPPC4-208ENST00000527680 SH3BP5LQ7L8J4 393 aa27.58■■■□□ 2.01
TRAPPC4-208ENST00000527680 SCYL3Q8IZE3 742 aa27.58■■■□□ 2.01
TRAPPC4-208ENST00000527680 TMEM57Q8N5G2 664 aa27.58■■■□□ 2.01
TRAPPC4-208ENST00000527680 ZNF333Q96JL9 665 aa27.58■■■□□ 2.01
TRAPPC4-208ENST00000527680 GPR75-ASB3A0A0A6YYF3 556 aa27.57■■■□□ 2
TRAPPC4-208ENST00000527680 HNRNPUQ00839 825 aaKnown RBP eCLIP27.57■■■□□ 2
TRAPPC4-208ENST00000527680 OS9Q13438 667 aaPredicted RBP27.57■■■□□ 2
TRAPPC4-208ENST00000527680 PI16Q6UXB8 463 aa27.57■■■□□ 2
TRAPPC4-208ENST00000527680 DDX4Q9NQI0 724 aaKnown RBP27.57■■■□□ 2
TRAPPC4-208ENST00000527680 FMNL1O95466 1100 aaPredicted RBP27.56■■■□□ 2
TRAPPC4-208ENST00000527680 PSMC4P43686 418 aa27.56■■■□□ 2
TRAPPC4-208ENST00000527680 LRP2BPQ9P2M1 347 aa27.56■■■□□ 2
TRAPPC4-208ENST00000527680 UQCRFS1P1P0C7P4 283 aa27.55■■■□□ 2
TRAPPC4-208ENST00000527680 PTPRAP18433 802 aa27.55■■■□□ 2
TRAPPC4-208ENST00000527680 HOXD10P28358 340 aa27.55■■■□□ 2
TRAPPC4-208ENST00000527680 PRMT2P55345 433 aa27.55■■■□□ 2
TRAPPC4-208ENST00000527680 FASTKD5Q7L8L6 764 aaKnown RBP27.55■■■□□ 2
TRAPPC4-208ENST00000527680 SH3TC2Q8TF17 1288 aa27.55■■■□□ 2
TRAPPC4-208ENST00000527680 SLURP2P0DP57 97 aa27.54■■■□□ 2
TRAPPC4-208ENST00000527680 MOGSQ13724 837 aa27.54■■■□□ 2
TRAPPC4-208ENST00000527680 GADL1Q6ZQY3 521 aa27.54■■■□□ 2
TRAPPC4-208ENST00000527680 NSUN4Q96CB9 384 aaKnown RBP27.54■■■□□ 2
TRAPPC4-208ENST00000527680 PARK7Q99497 189 aaKnown RBP27.54■■■□□ 2
TRAPPC4-208ENST00000527680 CENPFP49454 3210 aa27.54■■■□□ 2
TRAPPC4-208ENST00000527680 HTTP42858 3142 aa27.54■■■□□ 2
TRAPPC4-208ENST00000527680 CTNND1O60716 968 aaKnown RBP27.53■■■□□ 2
TRAPPC4-208ENST00000527680 ARID4AP29374 1257 aaPredicted RBP27.53■■■□□ 2
TRAPPC4-208ENST00000527680 MAP3K10Q02779 954 aa27.53■■■□□ 2
TRAPPC4-208ENST00000527680 FTSJ3Q8IY81 847 aaKnown RBP27.53■■■□□ 2
TRAPPC4-208ENST00000527680 NOL10Q9BSC4 688 aaKnown RBP27.53■■■□□ 2
TRAPPC4-208ENST00000527680 DOCK2Q92608 1830 aa27.53■■■□□ 2
TRAPPC4-208ENST00000527680 ATRNL1Q5VV63 1379 aa27.52■■■□□ 2
TRAPPC4-208ENST00000527680 CYP2C8P10632 490 aa27.52■■■□□ 2
TRAPPC4-208ENST00000527680 RHBDL3P58872 404 aa27.52■■■□□ 2
TRAPPC4-208ENST00000527680 TTC39AQ5SRH9 613 aa27.52■■■□□ 2
TRAPPC4-208ENST00000527680 GPAT2Q6NUI2 795 aa27.52■■■□□ 2
TRAPPC4-208ENST00000527680 ZNF384Q8TF68 577 aa27.52■■■□□ 2
TRAPPC4-208ENST00000527680 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.52■■■□□ 2
TRAPPC4-208ENST00000527680 AFG3L2Q9Y4W6 797 aa27.52■■■□□ 2
TRAPPC4-208ENST00000527680 SURF6O75683 361 aaKnown RBP27.51■■□□□ 1.99
TRAPPC4-208ENST00000527680 MCAMP43121 646 aa27.51■■□□□ 1.99
TRAPPC4-208ENST00000527680 ATP8B2P98198 1209 aa27.51■■□□□ 1.99
TRAPPC4-208ENST00000527680 CCDC158Q5M9N0 1113 aa27.51■■□□□ 1.99
TRAPPC4-208ENST00000527680 RAET1EQ8TD07 263 aa27.51■■□□□ 1.99
TRAPPC4-208ENST00000527680 TRIM47Q96LD4 638 aa27.51■■□□□ 1.99
TRAPPC4-208ENST00000527680 SNRKQ9NRH2 765 aa27.51■■□□□ 1.99
TRAPPC4-208ENST00000527680 ZSWIM8A7E2V4 1837 aa27.51■■□□□ 1.99
TRAPPC4-208ENST00000527680 A0A0G2JLL6 359 aaPredicted RBP27.5■■□□□ 1.99
TRAPPC4-208ENST00000527680 MAP4K4O95819 1239 aaPredicted RBP27.5■■□□□ 1.99
TRAPPC4-208ENST00000527680 PRRT2Q7Z6L0 340 aaPredicted RBP27.5■■□□□ 1.99
TRAPPC4-208ENST00000527680 MIER1Q8N108 512 aa27.5■■□□□ 1.99
TRAPPC4-208ENST00000527680 SRRDQ9UH36 339 aa27.5■■□□□ 1.99
TRAPPC4-208ENST00000527680 RFX7Q2KHR2 1363 aa27.49■■□□□ 1.99
TRAPPC4-208ENST00000527680 TRIM75PA6NK02 468 aa27.49■■□□□ 1.99
TRAPPC4-208ENST00000527680 OSBPP22059 807 aa27.49■■□□□ 1.99
TRAPPC4-208ENST00000527680 CTGFP29279 349 aa27.49■■□□□ 1.99
TRAPPC4-208ENST00000527680 ITPRIPQ8IWB1 547 aa27.49■■□□□ 1.99
TRAPPC4-208ENST00000527680 TEX11Q8IYF3 940 aa27.49■■□□□ 1.99
TRAPPC4-208ENST00000527680 C1orf115Q9H7X2 142 aa27.49■■□□□ 1.99
TRAPPC4-208ENST00000527680 FAM196BA6NMK8 535 aa27.48■■□□□ 1.99
TRAPPC4-208ENST00000527680 TBC1D12O60347 775 aa27.48■■□□□ 1.99
TRAPPC4-208ENST00000527680 NPM3O75607 178 aaKnown RBP27.48■■□□□ 1.99
TRAPPC4-208ENST00000527680 POLA2Q14181 598 aa27.48■■□□□ 1.99
TRAPPC4-208ENST00000527680 TNNI3KQ59H18 835 aa27.48■■□□□ 1.99
TRAPPC4-208ENST00000527680 GPR108Q9NPR9 543 aa27.48■■□□□ 1.99
TRAPPC4-208ENST00000527680 FPGT-TNNI3KV9GXZ4 949 aa27.48■■□□□ 1.99
TRAPPC4-208ENST00000527680 ADGRA2Q96PE1 1338 aa27.47■■□□□ 1.99
TRAPPC4-208ENST00000527680 FCGRTP55899 365 aa27.47■■□□□ 1.99
TRAPPC4-208ENST00000527680 NAA16Q6N069 864 aaPredicted RBP27.47■■□□□ 1.99
TRAPPC4-208ENST00000527680 SSH3Q8TE77 659 aa27.47■■□□□ 1.99
TRAPPC4-208ENST00000527680 DBNDD2Q9BQY9 259 aa27.47■■□□□ 1.99
TRAPPC4-208ENST00000527680 BIN2Q9UBW5 565 aaPredicted RBP27.47■■□□□ 1.99
TRAPPC4-208ENST00000527680 RBBP6Q7Z6E9 1792 aaKnown RBP27.47■■□□□ 1.99
TRAPPC4-208ENST00000527680 MYPNQ86TC9 1320 aa27.46■■□□□ 1.99
TRAPPC4-208ENST00000527680 BAG3O95817 575 aa27.46■■□□□ 1.99
TRAPPC4-208ENST00000527680 CCDC84Q86UT8 332 aaPredicted RBP27.46■■□□□ 1.99
TRAPPC4-208ENST00000527680 SMCR8Q8TEV9 937 aaPredicted RBP27.46■■□□□ 1.99
TRAPPC4-208ENST00000527680 OSBPL5Q9H0X9 879 aaPredicted RBP27.46■■□□□ 1.99
TRAPPC4-208ENST00000527680 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.46■■□□□ 1.99
TRAPPC4-208ENST00000527680 BCRP11274 1271 aa27.45■■□□□ 1.98
TRAPPC4-208ENST00000527680 SH3RF3Q8TEJ3 882 aaPredicted RBP27.45■■□□□ 1.98
TRAPPC4-208ENST00000527680 GCC1Q96CN9 775 aa27.45■■□□□ 1.98
TRAPPC4-208ENST00000527680 GRK4P32298 578 aa27.44■■□□□ 1.98
TRAPPC4-208ENST00000527680 AATFQ9NY61 560 aaKnown RBP eCLIP27.44■■□□□ 1.98
TRAPPC4-208ENST00000527680 SLC45A1Q9Y2W3 748 aa27.44■■□□□ 1.98
TRAPPC4-208ENST00000527680 DIEXFQ68CQ4 756 aaKnown RBP27.43■■□□□ 1.98
TRAPPC4-208ENST00000527680 ZBTB7BO15156 539 aaPredicted RBP27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms