RNA–Protein interactions for RNA: ENST00000527052.5

NOD2-204, Transcript of nucleotide binding oligomerization domain containing 2, human

TSL 1 (best)

Gene NOD2, Length 338 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NOD2-204	ENST00000527052	NPM3	O75607	178 aa	Known RBP	18.15	■□□□□ 0.5
NOD2-204	ENST00000527052	ZFPM1	Q8IX07	1006 aa		18.15	■□□□□ 0.5
NOD2-204	ENST00000527052	SCYL3	Q8IZE3	742 aa		18.15	■□□□□ 0.5
NOD2-204	ENST00000527052	GPR108	Q9NPR9	543 aa		18.15	■□□□□ 0.5
NOD2-204	ENST00000527052	PICK1	Q9NRD5	415 aa		18.15	■□□□□ 0.5
NOD2-204	ENST00000527052	PRMT2	P55345	433 aa		18.14	■□□□□ 0.49
NOD2-204	ENST00000527052	LACTB	P83111	547 aa	Predicted RBP	18.14	■□□□□ 0.49
NOD2-204	ENST00000527052	CAP1	Q01518	475 aa		18.14	■□□□□ 0.49
NOD2-204	ENST00000527052	MAP3K10	Q02779	954 aa		18.14	■□□□□ 0.49
NOD2-204	ENST00000527052	POLA2	Q14181	598 aa		18.14	■□□□□ 0.49
NOD2-204	ENST00000527052	NBPF11	Q86T75	865 aa		18.14	■□□□□ 0.49
NOD2-204	ENST00000527052	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	18.14	■□□□□ 0.49
NOD2-204	ENST00000527052	RBBP6	Q7Z6E9	1792 aa	Known RBP	18.14	■□□□□ 0.49
NOD2-204	ENST00000527052	MKI67	P46013	3256 aa	Known RBP	18.13	■□□□□ 0.49
NOD2-204	ENST00000527052	PHF20L1	A8MW92	1017 aa		18.13	■□□□□ 0.49
NOD2-204	ENST00000527052	PDHX	O00330	501 aa		18.13	■□□□□ 0.49
NOD2-204	ENST00000527052	RHBDL3	P58872	404 aa		18.13	■□□□□ 0.49
NOD2-204	ENST00000527052	OS9	Q13438	667 aa	Predicted RBP	18.13	■□□□□ 0.49
NOD2-204	ENST00000527052	PICALM	Q13492	652 aa		18.13	■□□□□ 0.49
NOD2-204	ENST00000527052	SLC9C1	Q4G0N8	1177 aa		18.13	■□□□□ 0.49
NOD2-204	ENST00000527052	SSH3	Q8TE77	659 aa		18.13	■□□□□ 0.49
NOD2-204	ENST00000527052	NSUN4	Q96CB9	384 aa	Known RBP	18.13	■□□□□ 0.49
NOD2-204	ENST00000527052	DDX4	Q9NQI0	724 aa	Known RBP	18.13	■□□□□ 0.49
NOD2-204	ENST00000527052	COL2A1	P02458	1487 aa	Predicted RBP	18.13	■□□□□ 0.49
NOD2-204	ENST00000527052	BRCA2	P51587	3418 aa		18.12	■□□□□ 0.49
NOD2-204	ENST00000527052	DDTL	A6NHG4	134 aa	Predicted RBP	18.12	■□□□□ 0.49
NOD2-204	ENST00000527052	MOGS	Q13724	837 aa		18.12	■□□□□ 0.49
NOD2-204	ENST00000527052	C17orf99	Q6UX52	265 aa		18.12	■□□□□ 0.49
NOD2-204	ENST00000527052	PI16	Q6UXB8	463 aa		18.12	■□□□□ 0.49
NOD2-204	ENST00000527052	SH3BP5L	Q7L8J4	393 aa		18.12	■□□□□ 0.49
NOD2-204	ENST00000527052	MIER1	Q8N108	512 aa		18.12	■□□□□ 0.49
NOD2-204	ENST00000527052	ZNF333	Q96JL9	665 aa		18.12	■□□□□ 0.49
NOD2-204	ENST00000527052	PARK7	Q99497	189 aa	Known RBP	18.12	■□□□□ 0.49
NOD2-204	ENST00000527052	TMEM106C	Q9BVX2	250 aa		18.12	■□□□□ 0.49
NOD2-204	ENST00000527052	RAI14	Q9P0K7	980 aa		18.12	■□□□□ 0.49
NOD2-204	ENST00000527052	PTCH2	Q9Y6C5	1203 aa		18.12	■□□□□ 0.49
NOD2-204	ENST00000527052	CTNND1	O60716	968 aa	Known RBP	18.11	■□□□□ 0.49
NOD2-204	ENST00000527052	IGSF3	O75054	1194 aa		18.11	■□□□□ 0.49
NOD2-204	ENST00000527052	SLC34A2	O95436	690 aa		18.11	■□□□□ 0.49
NOD2-204	ENST00000527052	PTPRA	P18433	802 aa		18.11	■□□□□ 0.49
NOD2-204	ENST00000527052	MCAM	P43121	646 aa		18.11	■□□□□ 0.49
NOD2-204	ENST00000527052	ATP8B2	P98198	1209 aa		18.11	■□□□□ 0.49
NOD2-204	ENST00000527052	TNNI3K	Q59H18	835 aa		18.11	■□□□□ 0.49
NOD2-204	ENST00000527052	CCDC158	Q5M9N0	1113 aa		18.11	■□□□□ 0.49
NOD2-204	ENST00000527052	FASTKD5	Q7L8L6	764 aa	Known RBP	18.11	■□□□□ 0.49
NOD2-204	ENST00000527052	ZNF384	Q8TF68	577 aa		18.11	■□□□□ 0.49
NOD2-204	ENST00000527052	LRP2BP	Q9P2M1	347 aa		18.11	■□□□□ 0.49
NOD2-204	ENST00000527052	ZHX2	Q9Y6X8	837 aa		18.11	■□□□□ 0.49
NOD2-204	ENST00000527052	FPGT-TNNI3K	V9GXZ4	949 aa		18.11	■□□□□ 0.49
NOD2-204	ENST00000527052	ADGRA2	Q96PE1	1338 aa		18.11	■□□□□ 0.49
NOD2-204	ENST00000527052	KIAA0100	Q14667	2235 aa	Known RBP	18.11	■□□□□ 0.49
NOD2-204	ENST00000527052	ZBED9	Q6R2W3	1325 aa		18.1	■□□□□ 0.49
NOD2-204	ENST00000527052		A0A0G2JLL6	359 aa	Predicted RBP	18.1	■□□□□ 0.49
NOD2-204	ENST00000527052	POTEF	A5A3E0	1075 aa		18.1	■□□□□ 0.49
NOD2-204	ENST00000527052	TBC1D12	O60347	775 aa		18.1	■□□□□ 0.49
NOD2-204	ENST00000527052	TTC39A	Q5SRH9	613 aa		18.1	■□□□□ 0.49
NOD2-204	ENST00000527052	TBC1D9	Q6ZT07	1266 aa		18.1	■□□□□ 0.49
NOD2-204	ENST00000527052	PRRT2	Q7Z6L0	340 aa	Predicted RBP	18.1	■□□□□ 0.49
NOD2-204	ENST00000527052	ITPRIP	Q8IWB1	547 aa		18.1	■□□□□ 0.49
NOD2-204	ENST00000527052	NOL10	Q9BSC4	688 aa	Known RBP	18.1	■□□□□ 0.49
NOD2-204	ENST00000527052	SURF6	O75683	361 aa	Known RBP	18.09	■□□□□ 0.49
NOD2-204	ENST00000527052	HOXD10	P28358	340 aa		18.09	■□□□□ 0.49
NOD2-204	ENST00000527052	ARHGAP39	Q9C0H5	1083 aa		18.09	■□□□□ 0.49
NOD2-204	ENST00000527052	CPA4	Q9UI42	421 aa		18.09	■□□□□ 0.49
NOD2-204	ENST00000527052	SLC45A1	Q9Y2W3	748 aa		18.09	■□□□□ 0.49
NOD2-204	ENST00000527052	DOCK1	Q14185	1865 aa		18.09	■□□□□ 0.49
NOD2-204	ENST00000527052	MAST2	Q6P0Q8	1798 aa		18.09	■□□□□ 0.49
NOD2-204	ENST00000527052	PLCG2	P16885	1265 aa		18.08	■□□□□ 0.48
NOD2-204	ENST00000527052	GPAT2	Q6NUI2	795 aa		18.08	■□□□□ 0.48
NOD2-204	ENST00000527052	TEX11	Q8IYF3	940 aa		18.08	■□□□□ 0.48
NOD2-204	ENST00000527052	ZNF512B	Q96KM6	892 aa	Predicted RBP	18.08	■□□□□ 0.48
NOD2-204	ENST00000527052	OSBPL5	Q9H0X9	879 aa	Predicted RBP	18.08	■□□□□ 0.48
NOD2-204	ENST00000527052	NOP58	Q9Y2X3	529 aa	Known RBP	18.08	■□□□□ 0.48
NOD2-204	ENST00000527052	AFG3L2	Q9Y4W6	797 aa		18.08	■□□□□ 0.48
NOD2-204	ENST00000527052	ZBTB7B	O15156	539 aa	Predicted RBP	18.07	■□□□□ 0.48
NOD2-204	ENST00000527052	BAG3	O95817	575 aa		18.07	■□□□□ 0.48
NOD2-204	ENST00000527052	PSMC4	P43686	418 aa		18.07	■□□□□ 0.48
NOD2-204	ENST00000527052	NAA16	Q6N069	864 aa	Predicted RBP	18.07	■□□□□ 0.48
NOD2-204	ENST00000527052	DBNDD2	Q9BQY9	259 aa		18.07	■□□□□ 0.48
NOD2-204	ENST00000527052	TBC1D2	Q9BYX2	928 aa		18.07	■□□□□ 0.48
NOD2-204	ENST00000527052	C1orf115	Q9H7X2	142 aa		18.07	■□□□□ 0.48
NOD2-204	ENST00000527052	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	18.07	■□□□□ 0.48
NOD2-204	ENST00000527052	SRRD	Q9UH36	339 aa		18.07	■□□□□ 0.48
NOD2-204	ENST00000527052	BCR	P11274	1271 aa		18.06	■□□□□ 0.48
NOD2-204	ENST00000527052	RLBP1	P12271	317 aa		18.06	■□□□□ 0.48
NOD2-204	ENST00000527052	GADL1	Q6ZQY3	521 aa		18.06	■□□□□ 0.48
NOD2-204	ENST00000527052	TRIM47	Q96LD4	638 aa		18.06	■□□□□ 0.48
NOD2-204	ENST00000527052	HERC5	Q9UII4	1024 aa	Known RBP	18.06	■□□□□ 0.48
NOD2-204	ENST00000527052	FMNL1	O95466	1100 aa	Predicted RBP	18.05	■□□□□ 0.48
NOD2-204	ENST00000527052	SLC4A8	Q2Y0W8	1093 aa		18.05	■□□□□ 0.48
NOD2-204	ENST00000527052	DHX36	Q9H2U1	1008 aa	Known RBP	18.05	■□□□□ 0.48
NOD2-204	ENST00000527052	SNRK	Q9NRH2	765 aa		18.05	■□□□□ 0.48
NOD2-204	ENST00000527052	ZSWIM8	A7E2V4	1837 aa		18.05	■□□□□ 0.48
NOD2-204	ENST00000527052	TRIM75P	A6NK02	468 aa		18.04	■□□□□ 0.48
NOD2-204	ENST00000527052	CYP2C8	P10632	490 aa		18.04	■□□□□ 0.48
NOD2-204	ENST00000527052	MS4A1	P11836	297 aa		18.04	■□□□□ 0.48
NOD2-204	ENST00000527052	EN2	P19622	333 aa	Predicted RBP	18.04	■□□□□ 0.48
NOD2-204	ENST00000527052	OSBP	P22059	807 aa		18.04	■□□□□ 0.48
NOD2-204	ENST00000527052	FCGRT	P55899	365 aa		18.04	■□□□□ 0.48
NOD2-204	ENST00000527052	PPP4C	P60510	307 aa		18.04	■□□□□ 0.48

Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms