RNA–Protein interactions for RNA: ENST00000526821.5

ATPAF1-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-208ENST00000526821 PDE3BQ13370 1112 aa8.1□□□□□ -1.11
ATPAF1-208ENST00000526821 CAPN12Q6ZSI9 719 aa8.1□□□□□ -1.11
ATPAF1-208ENST00000526821 NGEFQ8N5V2 710 aa8.1□□□□□ -1.11
ATPAF1-208ENST00000526821 C1orf115Q9H7X2 142 aa8.1□□□□□ -1.11
ATPAF1-208ENST00000526821 KCNMB2Q9Y691 235 aa8.1□□□□□ -1.11
ATPAF1-208ENST00000526821 IQSEC2Q5JU85 1478 aa8.1□□□□□ -1.11
ATPAF1-208ENST00000526821 KIF24Q5T7B8 1368 aa8.1□□□□□ -1.11
ATPAF1-208ENST00000526821 IL13P35225 146 aa8.09□□□□□ -1.11
ATPAF1-208ENST00000526821 MLLT1Q03111 559 aaPredicted RBP8.09□□□□□ -1.11
ATPAF1-208ENST00000526821 RRS1Q15050 365 aaKnown RBP8.09□□□□□ -1.11
ATPAF1-208ENST00000526821 TTC39BQ5VTQ0 682 aaPredicted RBP8.09□□□□□ -1.11
ATPAF1-208ENST00000526821 CD163Q86VB7 1156 aa8.09□□□□□ -1.11
ATPAF1-208ENST00000526821 HELQQ8TDG4 1101 aa8.09□□□□□ -1.11
ATPAF1-208ENST00000526821 NUDCQ9Y266 331 aa8.09□□□□□ -1.11
ATPAF1-208ENST00000526821 PEAK1Q9H792 1746 aa8.09□□□□□ -1.11
ATPAF1-208ENST00000526821 APAF1O14727 1248 aa8.08□□□□□ -1.12
ATPAF1-208ENST00000526821 PROCP04070 461 aa8.08□□□□□ -1.12
ATPAF1-208ENST00000526821 GATA4P43694 442 aa8.08□□□□□ -1.12
ATPAF1-208ENST00000526821 AFF1P51825 1210 aaKnown RBP8.08□□□□□ -1.12
ATPAF1-208ENST00000526821 WFDC8Q8IUA0 241 aa8.08□□□□□ -1.12
ATPAF1-208ENST00000526821 CCDC146Q8IYE0 955 aa8.08□□□□□ -1.12
ATPAF1-208ENST00000526821 GPR152Q8TDT2 470 aa8.08□□□□□ -1.12
ATPAF1-208ENST00000526821 TTC9Q92623 222 aa8.08□□□□□ -1.12
ATPAF1-208ENST00000526821 RUNDC1Q96C34 613 aa8.08□□□□□ -1.12
ATPAF1-208ENST00000526821 SPACA7Q96KW9 195 aa8.08□□□□□ -1.12
ATPAF1-208ENST00000526821 PLEKHF1Q96S99 279 aa8.08□□□□□ -1.12
ATPAF1-208ENST00000526821 SEPT3Q9UH03 358 aa8.08□□□□□ -1.12
ATPAF1-208ENST00000526821 NAGPAQ9UK23 515 aa8.08□□□□□ -1.12
ATPAF1-208ENST00000526821 SBNO1A3KN83 1393 aa8.08□□□□□ -1.12
ATPAF1-208ENST00000526821 SLIT3O75094 1523 aa8.08□□□□□ -1.12
ATPAF1-208ENST00000526821 NFAT5O94916 1531 aa8.08□□□□□ -1.12
ATPAF1-208ENST00000526821 LTBP4Q8N2S1 1624 aa8.07□□□□□ -1.12
ATPAF1-208ENST00000526821 USP19O94966 1318 aa8.07□□□□□ -1.12
ATPAF1-208ENST00000526821 MAP3K19Q56UN5 1328 aa8.07□□□□□ -1.12
ATPAF1-208ENST00000526821 LOC102724428A0A0B4J2F2 783 aa8.07□□□□□ -1.12
ATPAF1-208ENST00000526821 C9orf172C9J069 976 aa8.07□□□□□ -1.12
ATPAF1-208ENST00000526821 MMP20O60882 483 aa8.07□□□□□ -1.12
ATPAF1-208ENST00000526821 ITGB2P05107 769 aa8.07□□□□□ -1.12
ATPAF1-208ENST00000526821 U2AF1L5P0DN76 240 aaPredicted RBP8.07□□□□□ -1.12
ATPAF1-208ENST00000526821 ELNP15502 786 aa8.07□□□□□ -1.12
ATPAF1-208ENST00000526821 CHRNA4P43681 627 aa8.07□□□□□ -1.12
ATPAF1-208ENST00000526821 BAG6P46379 1132 aa8.07□□□□□ -1.12
ATPAF1-208ENST00000526821 SIK1P57059 783 aa8.07□□□□□ -1.12
ATPAF1-208ENST00000526821 U2AF1Q01081 240 aaKnown RBP eCLIP8.07□□□□□ -1.12
ATPAF1-208ENST00000526821 PDE4CQ08493 712 aa8.07□□□□□ -1.12
ATPAF1-208ENST00000526821 COL9A3Q14050 684 aaPredicted RBP8.07□□□□□ -1.12
ATPAF1-208ENST00000526821 PERM1Q5SV97 790 aa8.07□□□□□ -1.12
ATPAF1-208ENST00000526821 ALKBH2Q6NS38 261 aa8.07□□□□□ -1.12
ATPAF1-208ENST00000526821 KRT28Q7Z3Y7 464 aa8.07□□□□□ -1.12
ATPAF1-208ENST00000526821 DTWD1Q8N5C7 304 aa8.07□□□□□ -1.12
ATPAF1-208ENST00000526821 LPIN3Q9BQK8 851 aa8.07□□□□□ -1.12
ATPAF1-208ENST00000526821 SMG9Q9H0W8 520 aaKnown RBP8.07□□□□□ -1.12
ATPAF1-208ENST00000526821 USTQ9Y2C2 406 aa8.07□□□□□ -1.12
ATPAF1-208ENST00000526821 ALS2Q96Q42 1657 aa8.07□□□□□ -1.12
ATPAF1-208ENST00000526821 FLT4P35916 1363 aa8.07□□□□□ -1.12
ATPAF1-208ENST00000526821 PXDNQ92626 1479 aa8.06□□□□□ -1.12
ATPAF1-208ENST00000526821 A0A0A0MRY4 1105 aa8.06□□□□□ -1.12
ATPAF1-208ENST00000526821 TMEM88BA6NKF7 163 aa8.06□□□□□ -1.12
ATPAF1-208ENST00000526821 ZBTB42B2RXF5 422 aa8.06□□□□□ -1.12
ATPAF1-208ENST00000526821 FAM229AH3BQW9 127 aa8.06□□□□□ -1.12
ATPAF1-208ENST00000526821 PPM1GO15355 546 aaPredicted RBP8.06□□□□□ -1.12
ATPAF1-208ENST00000526821 SSFA2P28290 1259 aa8.06□□□□□ -1.12
ATPAF1-208ENST00000526821 NRG1Q02297 640 aaPredicted RBP8.06□□□□□ -1.12
ATPAF1-208ENST00000526821 CCDC27Q2M243 656 aa8.06□□□□□ -1.12
ATPAF1-208ENST00000526821 NOM1Q5C9Z4 860 aaKnown RBP8.06□□□□□ -1.12
ATPAF1-208ENST00000526821 MSL1Q68DK7 614 aa8.06□□□□□ -1.12
ATPAF1-208ENST00000526821 HFE2Q6ZVN8 426 aa8.06□□□□□ -1.12
ATPAF1-208ENST00000526821 BRINP3Q76B58 766 aa8.06□□□□□ -1.12
ATPAF1-208ENST00000526821 TCP11L2Q8N4U5 519 aa8.06□□□□□ -1.12
ATPAF1-208ENST00000526821 SLAIN2Q9P270 581 aa8.06□□□□□ -1.12
ATPAF1-208ENST00000526821 RTL1A6NKG5 1358 aa8.06□□□□□ -1.12
ATPAF1-208ENST00000526821 PHRF1Q9P1Y6 1649 aaKnown RBP8.06□□□□□ -1.12
ATPAF1-208ENST00000526821 RGPD1P0DJD0 1748 aa8.06□□□□□ -1.12
ATPAF1-208ENST00000526821 NPHP3Q7Z494 1330 aa8.05□□□□□ -1.12
ATPAF1-208ENST00000526821 U2SURPO15042 1029 aaKnown RBP8.05□□□□□ -1.12
ATPAF1-208ENST00000526821 HOXD8P13378 290 aaPredicted RBP8.05□□□□□ -1.12
ATPAF1-208ENST00000526821 SCNN1AP37088 669 aa8.05□□□□□ -1.12
ATPAF1-208ENST00000526821 XPCQ01831 940 aaPredicted RBP8.05□□□□□ -1.12
ATPAF1-208ENST00000526821 HYAL2Q12891 473 aa8.05□□□□□ -1.12
ATPAF1-208ENST00000526821 AAMPQ13685 434 aa8.05□□□□□ -1.12
ATPAF1-208ENST00000526821 EIF4A2Q14240 407 aaKnown RBP8.05□□□□□ -1.12
ATPAF1-208ENST00000526821 TRIP4Q15650 581 aaPredicted RBP8.05□□□□□ -1.12
ATPAF1-208ENST00000526821 HSP90AB2PQ58FF8 381 aa8.05□□□□□ -1.12
ATPAF1-208ENST00000526821 NUTM2GQ5VZR2 741 aa8.05□□□□□ -1.12
ATPAF1-208ENST00000526821 PDE12Q6L8Q7 609 aaKnown RBP8.05□□□□□ -1.12
ATPAF1-208ENST00000526821 DMRTC2Q8IXT2 367 aaPredicted RBP8.05□□□□□ -1.12
ATPAF1-208ENST00000526821 TRMT2AQ8IZ69 625 aaKnown RBP8.05□□□□□ -1.12
ATPAF1-208ENST00000526821 CACTIN-AS1Q8N1I8 211 aa8.05□□□□□ -1.12
ATPAF1-208ENST00000526821 GTF3C2Q8WUA4 911 aaPredicted RBP8.05□□□□□ -1.12
ATPAF1-208ENST00000526821 NSUN5Q96P11 429 aaKnown RBP8.05□□□□□ -1.12
ATPAF1-208ENST00000526821 FAM177BA6PVY3 158 aa8.04□□□□□ -1.12
ATPAF1-208ENST00000526821 HOXC9P31274 260 aa8.04□□□□□ -1.12
ATPAF1-208ENST00000526821 KCNH5Q8NCM2 988 aa8.04□□□□□ -1.12
ATPAF1-208ENST00000526821 OR13H1Q8NG92 308 aa8.04□□□□□ -1.12
ATPAF1-208ENST00000526821 PLD4Q96BZ4 506 aa8.04□□□□□ -1.12
ATPAF1-208ENST00000526821 PNNQ9H307 717 aaKnown RBP8.04□□□□□ -1.12
ATPAF1-208ENST00000526821 ABI2Q9NYB9 513 aaPredicted RBP8.04□□□□□ -1.12
ATPAF1-208ENST00000526821 MED1Q15648 1581 aaPredicted RBP8.04□□□□□ -1.12
ATPAF1-208ENST00000526821 SPATA31A3Q5VYP0 1347 aa8.03□□□□□ -1.12
ATPAF1-208ENST00000526821 RNF123Q5XPI4 1314 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms