RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 TCP10Q12799 353 aa20.89■□□□□ 0.93
LMX1B-203ENST00000526117 LRRFIP1Q32MZ4 808 aaKnown RBP20.89■□□□□ 0.93
LMX1B-203ENST00000526117 TSHZ3Q63HK5 1081 aa20.89■□□□□ 0.93
LMX1B-203ENST00000526117 DCAF15Q66K64 600 aa20.89■□□□□ 0.93
LMX1B-203ENST00000526117 SH3RF3Q8TEJ3 882 aaPredicted RBP20.89■□□□□ 0.93
LMX1B-203ENST00000526117 CAPNS2Q96L46 248 aa20.89■□□□□ 0.93
LMX1B-203ENST00000526117 OSBPL5Q9H0X9 879 aaPredicted RBP20.89■□□□□ 0.93
LMX1B-203ENST00000526117 LAMB1P07942 1786 aa20.88■□□□□ 0.93
LMX1B-203ENST00000526117 ZFYP08048 801 aaPredicted RBP20.88■□□□□ 0.93
LMX1B-203ENST00000526117 SLC10A3P09131 477 aa20.88■□□□□ 0.93
LMX1B-203ENST00000526117 MAP2K2P36507 400 aa20.88■□□□□ 0.93
LMX1B-203ENST00000526117 B4GALNT3Q6L9W6 998 aa20.88■□□□□ 0.93
LMX1B-203ENST00000526117 ANGEL1Q9UNK9 670 aaKnown RBP20.88■□□□□ 0.93
LMX1B-203ENST00000526117 OTOFQ9HC10 1997 aa20.87■□□□□ 0.93
LMX1B-203ENST00000526117 FAM155AB1AL88 458 aaPredicted RBP20.87■□□□□ 0.93
LMX1B-203ENST00000526117 NOGQ13253 232 aa20.87■□□□□ 0.93
LMX1B-203ENST00000526117 TTLL12Q14166 644 aaPredicted RBP20.87■□□□□ 0.93
LMX1B-203ENST00000526117 CYP4F22Q6NT55 531 aa20.87■□□□□ 0.93
LMX1B-203ENST00000526117 MOB2Q70IA6 237 aa20.87■□□□□ 0.93
LMX1B-203ENST00000526117 ZFPM1Q8IX07 1006 aa20.87■□□□□ 0.93
LMX1B-203ENST00000526117 ANKRD13AQ8IZ07 590 aa20.87■□□□□ 0.93
LMX1B-203ENST00000526117 DHX36Q9H2U1 1008 aaKnown RBP20.87■□□□□ 0.93
LMX1B-203ENST00000526117 DDX60LQ5H9U9 1706 aaKnown RBP20.87■□□□□ 0.93
LMX1B-203ENST00000526117 FLT1P17948 1338 aa20.86■□□□□ 0.93
LMX1B-203ENST00000526117 MAGEB6P1A0A0J9YX57 407 aa20.86■□□□□ 0.93
LMX1B-203ENST00000526117 UBE2Q2LH0YL09 131 aa20.86■□□□□ 0.93
LMX1B-203ENST00000526117 TBC1D12O60347 775 aa20.86■□□□□ 0.93
LMX1B-203ENST00000526117 ZNF157P51786 506 aaPredicted RBP20.86■□□□□ 0.93
LMX1B-203ENST00000526117 DYNLL1P63167 89 aaKnown RBP20.86■□□□□ 0.93
LMX1B-203ENST00000526117 SH3BP5LQ7L8J4 393 aa20.86■□□□□ 0.93
LMX1B-203ENST00000526117 PLEKHM2Q8IWE5 1019 aa20.86■□□□□ 0.93
LMX1B-203ENST00000526117 MIGA1Q8NAN2 632 aa20.86■□□□□ 0.93
LMX1B-203ENST00000526117 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.86■□□□□ 0.93
LMX1B-203ENST00000526117 CSRNP1Q96S65 589 aa20.86■□□□□ 0.93
LMX1B-203ENST00000526117 ZNF112Q9UJU3 913 aa20.86■□□□□ 0.93
LMX1B-203ENST00000526117 PCNTO95613 3336 aa20.86■□□□□ 0.93
LMX1B-203ENST00000526117 DDTLA6NHG4 134 aaPredicted RBP20.85■□□□□ 0.93
LMX1B-203ENST00000526117 PICALMQ13492 652 aa20.85■□□□□ 0.93
LMX1B-203ENST00000526117 RASAL3Q86YV0 1011 aa20.85■□□□□ 0.93
LMX1B-203ENST00000526117 EVI5LQ96CN4 794 aa20.85■□□□□ 0.93
LMX1B-203ENST00000526117 ZNF341Q9BYN7 854 aa20.85■□□□□ 0.93
LMX1B-203ENST00000526117 ERICH6BQ5W0A0 696 aa20.84■□□□□ 0.93
LMX1B-203ENST00000526117 METTL16Q86W50 562 aaKnown RBP20.84■□□□□ 0.93
LMX1B-203ENST00000526117 REM2Q8IYK8 340 aaPredicted RBP20.84■□□□□ 0.93
LMX1B-203ENST00000526117 TGFBRAP1Q8WUH2 860 aa20.84■□□□□ 0.93
LMX1B-203ENST00000526117 CRNKL1Q9BZJ0 848 aaKnown RBP20.84■□□□□ 0.93
LMX1B-203ENST00000526117 RNF113AO15541 343 aaKnown RBP20.83■□□□□ 0.93
LMX1B-203ENST00000526117 NEFLP07196 543 aa20.83■□□□□ 0.93
LMX1B-203ENST00000526117 PRKG1Q13976 671 aa20.83■□□□□ 0.93
LMX1B-203ENST00000526117 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.83■□□□□ 0.93
LMX1B-203ENST00000526117 CENPQQ7L2Z9 268 aaPredicted RBP20.83■□□□□ 0.93
LMX1B-203ENST00000526117 APPBP2Q92624 585 aa20.83■□□□□ 0.93
LMX1B-203ENST00000526117 HERC5Q9UII4 1024 aaKnown RBP20.83■□□□□ 0.93
LMX1B-203ENST00000526117 TAOK2Q9UL54 1235 aa20.83■□□□□ 0.93
LMX1B-203ENST00000526117 ZBTB48P10074 688 aaPredicted RBP20.82■□□□□ 0.92
LMX1B-203ENST00000526117 MAP3K9P80192 1104 aa20.82■□□□□ 0.92
LMX1B-203ENST00000526117 PAXIP1Q6ZW49 1069 aaPredicted RBP20.82■□□□□ 0.92
LMX1B-203ENST00000526117 PI4KBQ9UBF8 816 aa20.82■□□□□ 0.92
LMX1B-203ENST00000526117 FZD1Q9UP38 647 aa20.82■□□□□ 0.92
LMX1B-203ENST00000526117 SIPA1L1O43166 1804 aa20.81■□□□□ 0.92
LMX1B-203ENST00000526117 PHF20L1A8MW92 1017 aa20.81■□□□□ 0.92
LMX1B-203ENST00000526117 NOL9Q5SY16 702 aaKnown RBP20.81■□□□□ 0.92
LMX1B-203ENST00000526117 ZSCAN29Q8IWY8 852 aaPredicted RBP20.81■□□□□ 0.92
LMX1B-203ENST00000526117 WRNIP1Q96S55 665 aa20.81■□□□□ 0.92
LMX1B-203ENST00000526117 ATP8A2Q9NTI2 1148 aa20.81■□□□□ 0.92
LMX1B-203ENST00000526117 NAV1Q8NEY1 1877 aa20.8■□□□□ 0.92
LMX1B-203ENST00000526117 MBD4O95243 580 aa20.8■□□□□ 0.92
LMX1B-203ENST00000526117 PDE4AP27815 886 aa20.8■□□□□ 0.92
LMX1B-203ENST00000526117 USP5P45974 858 aa20.8■□□□□ 0.92
LMX1B-203ENST00000526117 MAP2K1Q02750 393 aaPredicted RBP20.8■□□□□ 0.92
LMX1B-203ENST00000526117 VGLL4Q14135 290 aa20.8■□□□□ 0.92
LMX1B-203ENST00000526117 MAPKAPK5Q8IW41 473 aa20.8■□□□□ 0.92
LMX1B-203ENST00000526117 LCORLQ8N3X6 602 aa20.8■□□□□ 0.92
LMX1B-203ENST00000526117 SLC10A4Q96EP9 437 aa20.8■□□□□ 0.92
LMX1B-203ENST00000526117 FSD1Q9BTV5 496 aa20.8■□□□□ 0.92
LMX1B-203ENST00000526117 PUS7LQ9H0K6 701 aaKnown RBP20.8■□□□□ 0.92
LMX1B-203ENST00000526117 EHD4Q9H223 541 aa20.8■□□□□ 0.92
LMX1B-203ENST00000526117 CSADQ9Y600 493 aa20.8■□□□□ 0.92
LMX1B-203ENST00000526117 AK9Q5TCS8 1911 aa20.8■□□□□ 0.92
LMX1B-203ENST00000526117 SPRYD7Q5W111 196 aa20.79■□□□□ 0.92
LMX1B-203ENST00000526117 MIGA2Q7L4E1 593 aa20.79■□□□□ 0.92
LMX1B-203ENST00000526117 FOXP4Q8IVH2 680 aaPredicted RBP20.79■□□□□ 0.92
LMX1B-203ENST00000526117 AIDAQ96BJ3 306 aa20.79■□□□□ 0.92
LMX1B-203ENST00000526117 CLMNQ96JQ2 1002 aa20.79■□□□□ 0.92
LMX1B-203ENST00000526117 MYH1P12882 1939 aa20.78■□□□□ 0.92
LMX1B-203ENST00000526117 SPDYE5A6NIY4 337 aa20.78■□□□□ 0.92
LMX1B-203ENST00000526117 AOC2O75106 756 aa20.78■□□□□ 0.92
LMX1B-203ENST00000526117 CHGBP05060 677 aa20.78■□□□□ 0.92
LMX1B-203ENST00000526117 HLA-DOAP06340 250 aa20.78■□□□□ 0.92
LMX1B-203ENST00000526117 SLFNL1Q499Z3 407 aa20.78■□□□□ 0.92
LMX1B-203ENST00000526117 ZMYM1Q5SVZ6 1142 aa20.78■□□□□ 0.92
LMX1B-203ENST00000526117 OSBP2Q969R2 916 aa20.78■□□□□ 0.92
LMX1B-203ENST00000526117 WNK4Q96J92 1243 aa20.78■□□□□ 0.92
LMX1B-203ENST00000526117 ARMT1Q9H993 441 aa20.78■□□□□ 0.92
LMX1B-203ENST00000526117 DCP1AQ9NPI6 582 aaPredicted RBP20.78■□□□□ 0.92
LMX1B-203ENST00000526117 SNCAIPQ9Y6H5 919 aa20.78■□□□□ 0.92
LMX1B-203ENST00000526117 GNAT2P19087 354 aa20.77■□□□□ 0.92
LMX1B-203ENST00000526117 GIMAP6Q6P9H5 292 aa20.77■□□□□ 0.92
LMX1B-203ENST00000526117 ERO1BQ86YB8 467 aa20.77■□□□□ 0.92
LMX1B-203ENST00000526117 STRBPQ96SI9 672 aaKnown RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms