RNA–Protein interactions for RNA: ENST00000524966.1

AP001001.2-201, humanhuman

TSL 3 BASIC

Gene AP001001.2, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001001.2-201ENST00000524966 ANKRD13AQ8IZ07 590 aa13.17□□□□□ -0.3
AP001001.2-201ENST00000524966 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.17□□□□□ -0.3
AP001001.2-201ENST00000524966 HOOK2Q96ED9 719 aa13.17□□□□□ -0.3
AP001001.2-201ENST00000524966 EDC3Q96F86 508 aaKnown RBP13.17□□□□□ -0.3
AP001001.2-201ENST00000524966 HAUS7Q99871 368 aa13.17□□□□□ -0.3
AP001001.2-201ENST00000524966 BOLA2Q9H3K6 86 aa13.17□□□□□ -0.3
AP001001.2-201ENST00000524966 DDTLA6NHG4 134 aaPredicted RBP13.16□□□□□ -0.3
AP001001.2-201ENST00000524966 BAG3O95817 575 aa13.16□□□□□ -0.3
AP001001.2-201ENST00000524966 CYP7A1P22680 504 aa13.16□□□□□ -0.3
AP001001.2-201ENST00000524966 FXR2P51116 673 aaKnown RBP eCLIP13.16□□□□□ -0.3
AP001001.2-201ENST00000524966 MAP3K12Q12852 859 aa13.16□□□□□ -0.3
AP001001.2-201ENST00000524966 TTF1Q15361 905 aaPredicted RBP13.16□□□□□ -0.3
AP001001.2-201ENST00000524966 TMED8Q6PL24 325 aaPredicted RBP13.16□□□□□ -0.3
AP001001.2-201ENST00000524966 SH3RF3Q8TEJ3 882 aaPredicted RBP13.16□□□□□ -0.3
AP001001.2-201ENST00000524966 AIDAQ96BJ3 306 aa13.16□□□□□ -0.3
AP001001.2-201ENST00000524966 AATFQ9NY61 560 aaKnown RBP eCLIP13.16□□□□□ -0.3
AP001001.2-201ENST00000524966 ZNF112Q9UJU3 913 aa13.16□□□□□ -0.3
AP001001.2-201ENST00000524966 GOLIM4O00461 696 aa13.15□□□□□ -0.3
AP001001.2-201ENST00000524966 GJA5P36382 358 aa13.15□□□□□ -0.3
AP001001.2-201ENST00000524966 TM4SF4P48230 202 aa13.15□□□□□ -0.3
AP001001.2-201ENST00000524966 CTCFP49711 727 aaPredicted RBP13.15□□□□□ -0.3
AP001001.2-201ENST00000524966 DCAF15Q66K64 600 aa13.15□□□□□ -0.3
AP001001.2-201ENST00000524966 TEX11Q8IYF3 940 aa13.15□□□□□ -0.3
AP001001.2-201ENST00000524966 MAGEB6Q8N7X4 407 aa13.15□□□□□ -0.3
AP001001.2-201ENST00000524966 WNK4Q96J92 1243 aa13.15□□□□□ -0.3
AP001001.2-201ENST00000524966 DNAJC2Q99543 621 aaKnown RBP13.15□□□□□ -0.3
AP001001.2-201ENST00000524966 BEGAINQ9BUH8 593 aa13.15□□□□□ -0.3
AP001001.2-201ENST00000524966 ECHDC1Q9NTX5 307 aa13.15□□□□□ -0.3
AP001001.2-201ENST00000524966 PAG1Q9NWQ8 432 aa13.15□□□□□ -0.3
AP001001.2-201ENST00000524966 PHF20L1A8MW92 1017 aa13.14□□□□□ -0.31
AP001001.2-201ENST00000524966 CA12O43570 354 aa13.14□□□□□ -0.31
AP001001.2-201ENST00000524966 ZBTB48P10074 688 aaPredicted RBP13.14□□□□□ -0.31
AP001001.2-201ENST00000524966 HSPA8P11142 646 aaKnown RBP13.14□□□□□ -0.31
AP001001.2-201ENST00000524966 PLCG2P16885 1265 aa13.14□□□□□ -0.31
AP001001.2-201ENST00000524966 LBX1P52954 281 aa13.14□□□□□ -0.31
AP001001.2-201ENST00000524966 DYNLL1P63167 89 aaKnown RBP13.14□□□□□ -0.31
AP001001.2-201ENST00000524966 MKRN3Q13064 507 aaKnown RBP13.14□□□□□ -0.31
AP001001.2-201ENST00000524966 PICALMQ13492 652 aa13.14□□□□□ -0.31
AP001001.2-201ENST00000524966 VGLL4Q14135 290 aa13.14□□□□□ -0.31
AP001001.2-201ENST00000524966 SLC9C2Q5TAH2 1124 aa13.14□□□□□ -0.31
AP001001.2-201ENST00000524966 GCC1Q96CN9 775 aa13.14□□□□□ -0.31
AP001001.2-201ENST00000524966 WRNIP1Q96S55 665 aa13.14□□□□□ -0.31
AP001001.2-201ENST00000524966 NOL10Q9BSC4 688 aaKnown RBP13.14□□□□□ -0.31
AP001001.2-201ENST00000524966 ZNF341Q9BYN7 854 aa13.14□□□□□ -0.31
AP001001.2-201ENST00000524966 ELP3Q9H9T3 547 aa13.14□□□□□ -0.31
AP001001.2-201ENST00000524966 ATRNL1Q5VV63 1379 aa13.14□□□□□ -0.31
AP001001.2-201ENST00000524966 DOCK2Q92608 1830 aa13.13□□□□□ -0.31
AP001001.2-201ENST00000524966 TCRBV5S4A2TA0A5A2 114 aa13.13□□□□□ -0.31
AP001001.2-201ENST00000524966 IGHDP01880 384 aa13.13□□□□□ -0.31
AP001001.2-201ENST00000524966 SLURP2P0DP57 97 aa13.13□□□□□ -0.31
AP001001.2-201ENST00000524966 PDE6AP16499 860 aa13.13□□□□□ -0.31
AP001001.2-201ENST00000524966 INPP5BP32019 993 aa13.13□□□□□ -0.31
AP001001.2-201ENST00000524966 COL13A1Q5TAT6 717 aaPredicted RBP13.13□□□□□ -0.31
AP001001.2-201ENST00000524966 ANKRD45Q5TZF3 282 aa13.13□□□□□ -0.31
AP001001.2-201ENST00000524966 ZSCAN29Q8IWY8 852 aaPredicted RBP13.13□□□□□ -0.31
AP001001.2-201ENST00000524966 MIGA1Q8NAN2 632 aa13.13□□□□□ -0.31
AP001001.2-201ENST00000524966 OTUD7AQ8TE49 926 aaPredicted RBP13.13□□□□□ -0.31
AP001001.2-201ENST00000524966 TGFBRAP1Q8WUH2 860 aa13.13□□□□□ -0.31
AP001001.2-201ENST00000524966 ZKSCAN4Q969J2 545 aaPredicted RBP13.13□□□□□ -0.31
AP001001.2-201ENST00000524966 OSBPL5Q9H0X9 879 aaPredicted RBP13.13□□□□□ -0.31
AP001001.2-201ENST00000524966 RWDD1Q9H446 243 aaPredicted RBP13.13□□□□□ -0.31
AP001001.2-201ENST00000524966 PRDM10Q9NQV6 1147 aa13.13□□□□□ -0.31
AP001001.2-201ENST00000524966 RNF186Q9NXI6 227 aa13.13□□□□□ -0.31
AP001001.2-201ENST00000524966 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.13□□□□□ -0.31
AP001001.2-201ENST00000524966 SNCAIPQ9Y6H5 919 aa13.13□□□□□ -0.31
AP001001.2-201ENST00000524966 PITPNM1O00562 1244 aa13.12□□□□□ -0.31
AP001001.2-201ENST00000524966 TBC1D12O60347 775 aa13.12□□□□□ -0.31
AP001001.2-201ENST00000524966 TRPA1O75762 1119 aa13.12□□□□□ -0.31
AP001001.2-201ENST00000524966 INHBEP58166 350 aa13.12□□□□□ -0.31
AP001001.2-201ENST00000524966 TSHZ3Q63HK5 1081 aa13.12□□□□□ -0.31
AP001001.2-201ENST00000524966 SMC5Q8IY18 1101 aa13.12□□□□□ -0.31
AP001001.2-201ENST00000524966 OPTNQ96CV9 577 aa13.12□□□□□ -0.31
AP001001.2-201ENST00000524966 MS4A4AQ96JQ5 239 aa13.12□□□□□ -0.31
AP001001.2-201ENST00000524966 RIOK1Q9BRS2 568 aaKnown RBP13.12□□□□□ -0.31
AP001001.2-201ENST00000524966 TSKSQ9UJT2 592 aa13.12□□□□□ -0.31
AP001001.2-201ENST00000524966 CSADQ9Y600 493 aa13.12□□□□□ -0.31
AP001001.2-201ENST00000524966 OTOFQ9HC10 1997 aa13.12□□□□□ -0.31
AP001001.2-201ENST00000524966 SALL3Q9BXA9 1300 aa13.12□□□□□ -0.31
AP001001.2-201ENST00000524966 ZNF532Q9HCE3 1301 aa13.12□□□□□ -0.31
AP001001.2-201ENST00000524966 CASP8AP2Q9UKL3 1982 aa13.11□□□□□ -0.31
AP001001.2-201ENST00000524966 CDK5RAP2Q96SN8 1893 aa13.11□□□□□ -0.31
AP001001.2-201ENST00000524966 TESPA1A2RU30 521 aaPredicted RBP13.11□□□□□ -0.31
AP001001.2-201ENST00000524966 MANSC4A6NHS7 340 aaPredicted RBP13.11□□□□□ -0.31
AP001001.2-201ENST00000524966 SPDYE5A6NIY4 337 aa13.11□□□□□ -0.31
AP001001.2-201ENST00000524966 SLFNL1Q499Z3 407 aa13.11□□□□□ -0.31
AP001001.2-201ENST00000524966 ERO1BQ86YB8 467 aa13.11□□□□□ -0.31
AP001001.2-201ENST00000524966 CERS3Q8IU89 383 aa13.11□□□□□ -0.31
AP001001.2-201ENST00000524966 MAPKAPK5Q8IW41 473 aa13.11□□□□□ -0.31
AP001001.2-201ENST00000524966 PI4K2BQ8TCG2 481 aa13.11□□□□□ -0.31
AP001001.2-201ENST00000524966 SAGE1Q9NXZ1 904 aa13.11□□□□□ -0.31
AP001001.2-201ENST00000524966 MAST2Q6P0Q8 1798 aa13.11□□□□□ -0.31
AP001001.2-201ENST00000524966 TTC41PQ6P2S7 1318 aa13.11□□□□□ -0.31
AP001001.2-201ENST00000524966 COL2A1P02458 1487 aaPredicted RBP13.1□□□□□ -0.31
AP001001.2-201ENST00000524966 CHGBP05060 677 aa13.1□□□□□ -0.31
AP001001.2-201ENST00000524966 ADD2P35612 726 aa13.1□□□□□ -0.31
AP001001.2-201ENST00000524966 IRX6P78412 446 aaPredicted RBP13.1□□□□□ -0.31
AP001001.2-201ENST00000524966 SREBF2Q12772 1141 aa13.1□□□□□ -0.31
AP001001.2-201ENST00000524966 NOL9Q5SY16 702 aaKnown RBP13.1□□□□□ -0.31
AP001001.2-201ENST00000524966 METTL16Q86W50 562 aaKnown RBP13.1□□□□□ -0.31
AP001001.2-201ENST00000524966 GPATCH3Q96I76 525 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms