RNA–Protein interactions for RNA: ENST00000524533.1

HIF3A-208, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-208ENST00000524533 FAM163AQ96GL9 167 aaPredicted RBP20.1■□□□□ 0.81
HIF3A-208ENST00000524533 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.1■□□□□ 0.81
HIF3A-208ENST00000524533 ADGRA2Q96PE1 1338 aa20.09■□□□□ 0.81
HIF3A-208ENST00000524533 MAST2Q6P0Q8 1798 aa20.09■□□□□ 0.81
HIF3A-208ENST00000524533 BRCA2P51587 3418 aa20.09■□□□□ 0.81
HIF3A-208ENST00000524533 PHF20L1A8MW92 1017 aa20.09■□□□□ 0.81
HIF3A-208ENST00000524533 BCAR3O75815 825 aa20.09■□□□□ 0.81
HIF3A-208ENST00000524533 ECM2O94769 699 aaPredicted RBP20.09■□□□□ 0.81
HIF3A-208ENST00000524533 PRMT2P55345 433 aa20.09■□□□□ 0.81
HIF3A-208ENST00000524533 MECOMQ03112 1051 aa20.09■□□□□ 0.81
HIF3A-208ENST00000524533 MOGSQ13724 837 aa20.09■□□□□ 0.81
HIF3A-208ENST00000524533 GORABQ5T7V8 394 aa20.09■□□□□ 0.81
HIF3A-208ENST00000524533 SH3BP5LQ7L8J4 393 aa20.09■□□□□ 0.81
HIF3A-208ENST00000524533 CLUAP1Q96AJ1 413 aa20.09■□□□□ 0.81
HIF3A-208ENST00000524533 DDX4Q9NQI0 724 aaKnown RBP20.09■□□□□ 0.81
HIF3A-208ENST00000524533 PICK1Q9NRD5 415 aa20.09■□□□□ 0.81
HIF3A-208ENST00000524533 PTPRFP10586 1907 aa20.08■□□□□ 0.81
HIF3A-208ENST00000524533 DDTLA6NHG4 134 aaPredicted RBP20.08■□□□□ 0.81
HIF3A-208ENST00000524533 CXCL11O14625 94 aa20.08■□□□□ 0.81
HIF3A-208ENST00000524533 SLC4A8Q2Y0W8 1093 aa20.08■□□□□ 0.81
HIF3A-208ENST00000524533 SH3TC2Q8TF17 1288 aa20.08■□□□□ 0.81
HIF3A-208ENST00000524533 PARK7Q99497 189 aaKnown RBP20.08■□□□□ 0.81
HIF3A-208ENST00000524533 HMG20BQ9P0W2 317 aa20.08■□□□□ 0.81
HIF3A-208ENST00000524533 PHIPQ8WWQ0 1821 aa20.08■□□□□ 0.8
HIF3A-208ENST00000524533 MKI67P46013 3256 aaKnown RBP20.08■□□□□ 0.8
HIF3A-208ENST00000524533 PNMA6EA0A0J9YXQ4 647 aa20.07■□□□□ 0.8
HIF3A-208ENST00000524533 MYCP01106 439 aaPredicted RBP20.07■□□□□ 0.8
HIF3A-208ENST00000524533 PI16Q6UXB8 463 aa20.07■□□□□ 0.8
HIF3A-208ENST00000524533 SPATA5Q8NB90 893 aa20.07■□□□□ 0.8
HIF3A-208ENST00000524533 ZHX2Q9Y6X8 837 aa20.07■□□□□ 0.8
HIF3A-208ENST00000524533 GPR75-ASB3A0A0A6YYF3 556 aa20.06■□□□□ 0.8
HIF3A-208ENST00000524533 MGAMO43451 1857 aa20.06■□□□□ 0.8
HIF3A-208ENST00000524533 PTPRAP18433 802 aa20.06■□□□□ 0.8
HIF3A-208ENST00000524533 ARID4AP29374 1257 aaPredicted RBP20.06■□□□□ 0.8
HIF3A-208ENST00000524533 PSMC4P43686 418 aa20.06■□□□□ 0.8
HIF3A-208ENST00000524533 GSTO1P78417 241 aa20.06■□□□□ 0.8
HIF3A-208ENST00000524533 G3BP1Q13283 466 aaKnown RBP eCLIP20.06■□□□□ 0.8
HIF3A-208ENST00000524533 ZNF384Q8TF68 577 aa20.06■□□□□ 0.8
HIF3A-208ENST00000524533 GCC1Q96CN9 775 aa20.06■□□□□ 0.8
HIF3A-208ENST00000524533 TRIM47Q96LD4 638 aa20.06■□□□□ 0.8
HIF3A-208ENST00000524533 ATAD5Q96QE3 1844 aa20.05■□□□□ 0.8
HIF3A-208ENST00000524533 A0A0G2JLL6 359 aaPredicted RBP20.05■□□□□ 0.8
HIF3A-208ENST00000524533 FMNL1O95466 1100 aaPredicted RBP20.05■□□□□ 0.8
HIF3A-208ENST00000524533 CTGFP29279 349 aa20.05■□□□□ 0.8
HIF3A-208ENST00000524533 RHBDL3P58872 404 aa20.05■□□□□ 0.8
HIF3A-208ENST00000524533 MAP3K10Q02779 954 aa20.05■□□□□ 0.8
HIF3A-208ENST00000524533 GPAT2Q6NUI2 795 aa20.05■□□□□ 0.8
HIF3A-208ENST00000524533 FASTKD5Q7L8L6 764 aaKnown RBP20.05■□□□□ 0.8
HIF3A-208ENST00000524533 PRRT2Q7Z6L0 340 aaPredicted RBP20.05■□□□□ 0.8
HIF3A-208ENST00000524533 SRRDQ9UH36 339 aa20.05■□□□□ 0.8
HIF3A-208ENST00000524533 COL2A1P02458 1487 aaPredicted RBP20.05■□□□□ 0.8
HIF3A-208ENST00000524533 LDHCP07864 332 aa20.04■□□□□ 0.8
HIF3A-208ENST00000524533 SLURP2P0DP57 97 aa20.04■□□□□ 0.8
HIF3A-208ENST00000524533 CYP2C8P10632 490 aa20.04■□□□□ 0.8
HIF3A-208ENST00000524533 OSBPP22059 807 aa20.04■□□□□ 0.8
HIF3A-208ENST00000524533 HOXD10P28358 340 aa20.04■□□□□ 0.8
HIF3A-208ENST00000524533 ZKSCAN2Q63HK3 967 aa20.04■□□□□ 0.8
HIF3A-208ENST00000524533 GADL1Q6ZQY3 521 aa20.04■□□□□ 0.8
HIF3A-208ENST00000524533 TBC1D9Q6ZT07 1266 aa20.04■□□□□ 0.8
HIF3A-208ENST00000524533 TMEM57Q8N5G2 664 aa20.04■□□□□ 0.8
HIF3A-208ENST00000524533 NSUN4Q96CB9 384 aaKnown RBP20.04■□□□□ 0.8
HIF3A-208ENST00000524533 RAI14Q9P0K7 980 aa20.04■□□□□ 0.8
HIF3A-208ENST00000524533 AFG3L2Q9Y4W6 797 aa20.04■□□□□ 0.8
HIF3A-208ENST00000524533 MYPNQ86TC9 1320 aa20.03■□□□□ 0.8
HIF3A-208ENST00000524533 CTNND1O60716 968 aaKnown RBP20.03■□□□□ 0.8
HIF3A-208ENST00000524533 NPM3O75607 178 aaKnown RBP20.03■□□□□ 0.8
HIF3A-208ENST00000524533 MAP4K4O95819 1239 aaPredicted RBP20.03■□□□□ 0.8
HIF3A-208ENST00000524533 UQCRFS1P1P0C7P4 283 aa20.03■□□□□ 0.8
HIF3A-208ENST00000524533 BCRP11274 1271 aa20.03■□□□□ 0.8
HIF3A-208ENST00000524533 MCAMP43121 646 aa20.03■□□□□ 0.8
HIF3A-208ENST00000524533 RAET1EQ8TD07 263 aa20.03■□□□□ 0.8
HIF3A-208ENST00000524533 LOC285556D6RIA3 1793 aa20.01■□□□□ 0.79
HIF3A-208ENST00000524533 TRIM75PA6NK02 468 aa20.01■□□□□ 0.79
HIF3A-208ENST00000524533 FAM196BA6NMK8 535 aa20.01■□□□□ 0.79
HIF3A-208ENST00000524533 FCGRTP55899 365 aa20.01■□□□□ 0.79
HIF3A-208ENST00000524533 OS9Q13438 667 aaPredicted RBP20.01■□□□□ 0.79
HIF3A-208ENST00000524533 NOL10Q9BSC4 688 aaKnown RBP20.01■□□□□ 0.79
HIF3A-208ENST00000524533 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.01■□□□□ 0.79
HIF3A-208ENST00000524533 LRP2BPQ9P2M1 347 aa20.01■□□□□ 0.79
HIF3A-208ENST00000524533 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.01■□□□□ 0.79
HIF3A-208ENST00000524533 SLC45A1Q9Y2W3 748 aa20.01■□□□□ 0.79
HIF3A-208ENST00000524533 TBC1D12O60347 775 aa20■□□□□ 0.79
HIF3A-208ENST00000524533 GRK4P32298 578 aa20■□□□□ 0.79
HIF3A-208ENST00000524533 TTC39AQ5SRH9 613 aa20■□□□□ 0.79
HIF3A-208ENST00000524533 CCDC84Q86UT8 332 aaPredicted RBP20■□□□□ 0.79
HIF3A-208ENST00000524533 TEX11Q8IYF3 940 aa20■□□□□ 0.79
HIF3A-208ENST00000524533 OSBPL5Q9H0X9 879 aaPredicted RBP20■□□□□ 0.79
HIF3A-208ENST00000524533 CDK5RAP2Q96SN8 1893 aa19.99■□□□□ 0.79
HIF3A-208ENST00000524533 PRKCZQ05513 592 aa19.99■□□□□ 0.79
HIF3A-208ENST00000524533 POLA2Q14181 598 aa19.99■□□□□ 0.79
HIF3A-208ENST00000524533 MTFR1Q15390 333 aa19.99■□□□□ 0.79
HIF3A-208ENST00000524533 TNNI3KQ59H18 835 aa19.99■□□□□ 0.79
HIF3A-208ENST00000524533 FTSJ3Q8IY81 847 aaKnown RBP19.99■□□□□ 0.79
HIF3A-208ENST00000524533 SMCR8Q8TEV9 937 aaPredicted RBP19.99■□□□□ 0.79
HIF3A-208ENST00000524533 GPR108Q9NPR9 543 aa19.99■□□□□ 0.79
HIF3A-208ENST00000524533 PCDH10Q9P2E7 1040 aa19.99■□□□□ 0.79
HIF3A-208ENST00000524533 FPGT-TNNI3KV9GXZ4 949 aa19.99■□□□□ 0.79
HIF3A-208ENST00000524533 SIPA1L1O43166 1804 aa19.99■□□□□ 0.79
HIF3A-208ENST00000524533 FOCADQ5VW36 1801 aa19.99■□□□□ 0.79
HIF3A-208ENST00000524533 HNRNPUQ00839 825 aaKnown RBP eCLIP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms