RNA–Protein interactions for RNA: ENST00000524074.1

PFDN1-207, Transcript of prefoldin subunit 1, humanhuman

TSL 5 BASIC

Gene PFDN1, Length 395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-207ENST00000524074 TAB3Q8N5C8 712 aaPredicted RBP11.83□□□□□ -0.52
PFDN1-207ENST00000524074 NINJ1Q92982 152 aa11.83□□□□□ -0.52
PFDN1-207ENST00000524074 TPD52L2O43399 206 aaKnown RBP11.82□□□□□ -0.52
PFDN1-207ENST00000524074 ESRRAP11474 423 aaPredicted RBP11.82□□□□□ -0.52
PFDN1-207ENST00000524074 MYCLP1P12525 358 aaPredicted RBP11.82□□□□□ -0.52
PFDN1-207ENST00000524074 CDKN1CP49918 316 aaPredicted RBP11.82□□□□□ -0.52
PFDN1-207ENST00000524074 ZC3H12BQ5HYM0 836 aaKnown RBP11.82□□□□□ -0.52
PFDN1-207ENST00000524074 CT47A1Q5JQC4 288 aaPredicted RBP11.82□□□□□ -0.52
PFDN1-207ENST00000524074 FAM182BQ5T319 152 aa11.82□□□□□ -0.52
PFDN1-207ENST00000524074 JAMLQ86YT9 394 aa11.82□□□□□ -0.52
PFDN1-207ENST00000524074 MYH16Q9H6N6 1097 aa11.82□□□□□ -0.52
PFDN1-207ENST00000524074 PRR12Q9ULL5 1215 aa11.82□□□□□ -0.52
PFDN1-207ENST00000524074 IQCA1LA6NCM1 817 aa11.81□□□□□ -0.52
PFDN1-207ENST00000524074 GSTP1P09211 210 aaKnown RBP11.81□□□□□ -0.52
PFDN1-207ENST00000524074 EVA1CP58658 441 aa11.81□□□□□ -0.52
PFDN1-207ENST00000524074 EXOSC10Q01780 885 aaKnown RBP11.81□□□□□ -0.52
PFDN1-207ENST00000524074 IKBKEQ14164 716 aa11.81□□□□□ -0.52
PFDN1-207ENST00000524074 MPRIPQ6WCQ1 1025 aa11.81□□□□□ -0.52
PFDN1-207ENST00000524074 PDZD3Q86UT5 571 aa11.81□□□□□ -0.52
PFDN1-207ENST00000524074 TRIM22Q8IYM9 498 aa11.81□□□□□ -0.52
PFDN1-207ENST00000524074 ACSBG1Q96GR2 724 aa11.81□□□□□ -0.52
PFDN1-207ENST00000524074 PHAXQ9H814 394 aaKnown RBP11.81□□□□□ -0.52
PFDN1-207ENST00000524074 MAGEC2Q9UBF1 373 aaPredicted RBP11.81□□□□□ -0.52
PFDN1-207ENST00000524074 TCEAL9Q9UHQ7 104 aa11.81□□□□□ -0.52
PFDN1-207ENST00000524074 PHF24Q9UPV7 400 aa11.81□□□□□ -0.52
PFDN1-207ENST00000524074 IRS4O14654 1257 aaPredicted RBP11.8□□□□□ -0.52
PFDN1-207ENST00000524074 FGFR3P22607 806 aa11.8□□□□□ -0.52
PFDN1-207ENST00000524074 SOX5P35711 763 aa11.8□□□□□ -0.52
PFDN1-207ENST00000524074 STAT3P40763 770 aa11.8□□□□□ -0.52
PFDN1-207ENST00000524074 CABP4P57796 275 aa11.8□□□□□ -0.52
PFDN1-207ENST00000524074 DBN1Q16643 649 aa11.8□□□□□ -0.52
PFDN1-207ENST00000524074 WIPI1Q5MNZ9 446 aaPredicted RBP11.8□□□□□ -0.52
PFDN1-207ENST00000524074 THNSL2Q86YJ6 484 aa11.8□□□□□ -0.52
PFDN1-207ENST00000524074 ZBTB38Q8NAP3 1195 aaPredicted RBP11.8□□□□□ -0.52
PFDN1-207ENST00000524074 SGSM3Q96HU1 749 aa11.8□□□□□ -0.52
PFDN1-207ENST00000524074 LACRTQ9GZZ8 138 aa11.8□□□□□ -0.52
PFDN1-207ENST00000524074 ADAM19Q9H013 955 aa11.8□□□□□ -0.52
PFDN1-207ENST00000524074 EPN3Q9H201 632 aa11.8□□□□□ -0.52
PFDN1-207ENST00000524074 CAAP1Q9H8G2 361 aa11.8□□□□□ -0.52
PFDN1-207ENST00000524074 GMIPQ9P107 970 aa11.8□□□□□ -0.52
PFDN1-207ENST00000524074 GABBR1Q9UBS5 961 aa11.8□□□□□ -0.52
PFDN1-207ENST00000524074 PCDHA4Q9UN74 947 aa11.8□□□□□ -0.52
PFDN1-207ENST00000524074 PRR36Q9H6K5 1346 aa11.8□□□□□ -0.52
PFDN1-207ENST00000524074 CCDC163A0A0D9SF12 145 aa11.79□□□□□ -0.52
PFDN1-207ENST00000524074 CPB1P15086 417 aa11.79□□□□□ -0.52
PFDN1-207ENST00000524074 PERM1Q5SV97 790 aa11.79□□□□□ -0.52
PFDN1-207ENST00000524074 GORABQ5T7V8 394 aa11.79□□□□□ -0.52
PFDN1-207ENST00000524074 UNC5AQ6ZN44 842 aa11.79□□□□□ -0.52
PFDN1-207ENST00000524074 FAM35AQ86V20 835 aa11.79□□□□□ -0.52
PFDN1-207ENST00000524074 LOC102724159A0A0B4J2E5 919 aa11.78□□□□□ -0.52
PFDN1-207ENST00000524074 SLC35F4A4IF30 521 aa11.78□□□□□ -0.52
PFDN1-207ENST00000524074 FAM187AA6NFU0 413 aa11.78□□□□□ -0.52
PFDN1-207ENST00000524074 KCNQ2O43526 872 aa11.78□□□□□ -0.52
PFDN1-207ENST00000524074 SUSD5O60279 629 aa11.78□□□□□ -0.52
PFDN1-207ENST00000524074 CDK8P49336 464 aa11.78□□□□□ -0.52
PFDN1-207ENST00000524074 PTSQ03393 145 aa11.78□□□□□ -0.52
PFDN1-207ENST00000524074 PWP2Q15269 919 aaKnown RBP11.78□□□□□ -0.52
PFDN1-207ENST00000524074 SLC10A6Q3KNW5 377 aa11.78□□□□□ -0.52
PFDN1-207ENST00000524074 OVOS1Q6IE37 1185 aa11.78□□□□□ -0.52
PFDN1-207ENST00000524074 SPNS2Q8IVW8 549 aa11.78□□□□□ -0.52
PFDN1-207ENST00000524074 CCAR1Q8IX12 1150 aaKnown RBP11.78□□□□□ -0.52
PFDN1-207ENST00000524074 REV1Q9UBZ9 1251 aa11.78□□□□□ -0.52
PFDN1-207ENST00000524074 MCM8Q9UJA3 840 aa11.78□□□□□ -0.52
PFDN1-207ENST00000524074 ADCY3O60266 1144 aa11.77□□□□□ -0.53
PFDN1-207ENST00000524074 PEX14O75381 377 aa11.77□□□□□ -0.53
PFDN1-207ENST00000524074 AVPP01185 164 aa11.77□□□□□ -0.53
PFDN1-207ENST00000524074 PABPC4Q13310 644 aaKnown RBP eCLIP11.77□□□□□ -0.53
PFDN1-207ENST00000524074 ZYXQ15942 572 aaKnown RBP11.77□□□□□ -0.53
PFDN1-207ENST00000524074 BRDTQ58F21 947 aaPredicted RBP11.77□□□□□ -0.53
PFDN1-207ENST00000524074 SYT9Q86SS6 491 aa11.77□□□□□ -0.53
PFDN1-207ENST00000524074 CCDC146Q8IYE0 955 aa11.77□□□□□ -0.53
PFDN1-207ENST00000524074 GMCL1Q96IK5 515 aa11.77□□□□□ -0.53
PFDN1-207ENST00000524074 ALG1L2C9J202 215 aa11.76□□□□□ -0.53
PFDN1-207ENST00000524074 NME1P15531 152 aaKnown RBP11.76□□□□□ -0.53
PFDN1-207ENST00000524074 INTS3Q68E01 1043 aaKnown RBP11.76□□□□□ -0.53
PFDN1-207ENST00000524074 KIAA1211LQ6NV74 962 aa11.76□□□□□ -0.53
PFDN1-207ENST00000524074 ELMSAN1Q6PJG2 1045 aa11.76□□□□□ -0.53
PFDN1-207ENST00000524074 NLRC3Q7RTR2 1065 aa11.76□□□□□ -0.53
PFDN1-207ENST00000524074 DDX42Q86XP3 938 aaKnown RBP eCLIP11.76□□□□□ -0.53
PFDN1-207ENST00000524074 GPBAR1Q8TDU6 330 aa11.76□□□□□ -0.53
PFDN1-207ENST00000524074 FAM126AQ9BYI3 521 aaPredicted RBP11.76□□□□□ -0.53
PFDN1-207ENST00000524074 ZC3H12CQ9C0D7 883 aaKnown RBP11.76□□□□□ -0.53
PFDN1-207ENST00000524074 SMG9Q9H0W8 520 aaKnown RBP11.76□□□□□ -0.53
PFDN1-207ENST00000524074 SH2B1Q9NRF2 756 aaPredicted RBP11.76□□□□□ -0.53
PFDN1-207ENST00000524074 TRIM33Q9UPN9 1127 aa11.76□□□□□ -0.53
PFDN1-207ENST00000524074 CORINQ9Y5Q5 1042 aa11.76□□□□□ -0.53
PFDN1-207ENST00000524074 EID1Q9Y6B2 187 aa11.76□□□□□ -0.53
PFDN1-207ENST00000524074 SNCAIPQ9Y6H5 919 aa11.76□□□□□ -0.53
PFDN1-207ENST00000524074 AGRPO00253 132 aa11.75□□□□□ -0.53
PFDN1-207ENST00000524074 GFRA2O00451 464 aa11.75□□□□□ -0.53
PFDN1-207ENST00000524074 PDE8AO60658 829 aa11.75□□□□□ -0.53
PFDN1-207ENST00000524074 ACRP10323 421 aa11.75□□□□□ -0.53
PFDN1-207ENST00000524074 PLCG1P19174 1290 aa11.75□□□□□ -0.53
PFDN1-207ENST00000524074 TBX4P57082 545 aa11.75□□□□□ -0.53
PFDN1-207ENST00000524074 NFKB2Q00653 900 aa11.75□□□□□ -0.53
PFDN1-207ENST00000524074 HDXQ7Z353 690 aa11.75□□□□□ -0.53
PFDN1-207ENST00000524074 GTPBP3Q969Y2 492 aaKnown RBP11.75□□□□□ -0.53
PFDN1-207ENST00000524074 ATG4CQ96DT6 458 aa11.75□□□□□ -0.53
PFDN1-207ENST00000524074 PLPPR2Q96GM1 343 aa11.75□□□□□ -0.53
PFDN1-207ENST00000524074 GEMIN8Q9NWZ8 242 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms