RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 CDAN1Q8IWY9 1227 aa15.2■□□□□ 0.02
VEGFA-225ENST00000523950 ANKRD13AQ8IZ07 590 aa15.2■□□□□ 0.02
VEGFA-225ENST00000523950 KBTBD3Q8NAB2 608 aa15.2■□□□□ 0.02
VEGFA-225ENST00000523950 PI4K2BQ8TCG2 481 aa15.2■□□□□ 0.02
VEGFA-225ENST00000523950 LAMB1P07942 1786 aa15.2■□□□□ 0.02
VEGFA-225ENST00000523950 TCRBV5S4A2TA0A5A2 114 aa15.19■□□□□ 0.02
VEGFA-225ENST00000523950 FAM155AB1AL88 458 aaPredicted RBP15.19■□□□□ 0.02
VEGFA-225ENST00000523950 PICALMQ13492 652 aa15.19■□□□□ 0.02
VEGFA-225ENST00000523950 PRKG1Q13976 671 aa15.19■□□□□ 0.02
VEGFA-225ENST00000523950 UBE3CQ15386 1083 aa15.19■□□□□ 0.02
VEGFA-225ENST00000523950 RASAL3Q86YV0 1011 aa15.19■□□□□ 0.02
VEGFA-225ENST00000523950 REM2Q8IYK8 340 aaPredicted RBP15.19■□□□□ 0.02
VEGFA-225ENST00000523950 SH3RF3Q8TEJ3 882 aaPredicted RBP15.19■□□□□ 0.02
VEGFA-225ENST00000523950 EDC3Q96F86 508 aaKnown RBP15.19■□□□□ 0.02
VEGFA-225ENST00000523950 ZNF341Q9BYN7 854 aa15.19■□□□□ 0.02
VEGFA-225ENST00000523950 LNPKQ9C0E8 428 aa15.19■□□□□ 0.02
VEGFA-225ENST00000523950 OSBPL5Q9H0X9 879 aaPredicted RBP15.19■□□□□ 0.02
VEGFA-225ENST00000523950 DDX4Q9NQI0 724 aaKnown RBP15.19■□□□□ 0.02
VEGFA-225ENST00000523950 ZNF532Q9HCE3 1301 aa15.18■□□□□ 0.02
VEGFA-225ENST00000523950 ZFYP08048 801 aaPredicted RBP15.18■□□□□ 0.02
VEGFA-225ENST00000523950 PDE1AP54750 535 aa15.18■□□□□ 0.02
VEGFA-225ENST00000523950 MAP2K1Q02750 393 aaPredicted RBP15.18■□□□□ 0.02
VEGFA-225ENST00000523950 B4GALNT3Q6L9W6 998 aa15.18■□□□□ 0.02
VEGFA-225ENST00000523950 ZSCAN29Q8IWY8 852 aaPredicted RBP15.18■□□□□ 0.02
VEGFA-225ENST00000523950 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.18■□□□□ 0.022e-42■□□□□ 11.1
VEGFA-225ENST00000523950 OTUD7AQ8TE49 926 aaPredicted RBP15.18■□□□□ 0.02
VEGFA-225ENST00000523950 CSRNP1Q96S65 589 aa15.18■□□□□ 0.02
VEGFA-225ENST00000523950 DHX36Q9H2U1 1008 aaKnown RBP15.18■□□□□ 0.02
VEGFA-225ENST00000523950 MAGEB6P1A0A0J9YX57 407 aa15.17■□□□□ 0.02
VEGFA-225ENST00000523950 MAP3K9P80192 1104 aa15.17■□□□□ 0.02
VEGFA-225ENST00000523950 MAP3K10Q02779 954 aa15.17■□□□□ 0.02
VEGFA-225ENST00000523950 GRM1Q13255 1194 aa15.17■□□□□ 0.02
VEGFA-225ENST00000523950 TSHZ3Q63HK5 1081 aa15.17■□□□□ 0.02
VEGFA-225ENST00000523950 TICAM2Q86XR7 235 aa15.17■□□□□ 0.02
VEGFA-225ENST00000523950 ZFPM1Q8IX07 1006 aa15.17■□□□□ 0.02
VEGFA-225ENST00000523950 MIGA1Q8NAN2 632 aa15.17■□□□□ 0.02
VEGFA-225ENST00000523950 RIOK1Q9BRS2 568 aaKnown RBP15.17■□□□□ 0.02
VEGFA-225ENST00000523950 MYH1P12882 1939 aa15.17■□□□□ 0.02
VEGFA-225ENST00000523950 FLT1P17948 1338 aa15.17■□□□□ 0.02
VEGFA-225ENST00000523950 NAV1Q8NEY1 1877 aa15.16■□□□□ 0.02
VEGFA-225ENST00000523950 TBC1D12O60347 775 aa15.16■□□□□ 0.02
VEGFA-225ENST00000523950 ZBTB48P10074 688 aaPredicted RBP15.16■□□□□ 0.02
VEGFA-225ENST00000523950 DYNLL1P63167 89 aaKnown RBP15.16■□□□□ 0.02
VEGFA-225ENST00000523950 SH3BP5LQ7L8J4 393 aa15.16■□□□□ 0.02
VEGFA-225ENST00000523950 TGFBRAP1Q8WUH2 860 aa15.16■□□□□ 0.02
VEGFA-225ENST00000523950 SLC10A4Q96EP9 437 aa15.16■□□□□ 0.02
VEGFA-225ENST00000523950 CRNKL1Q9BZJ0 848 aaKnown RBP15.16■□□□□ 0.02
VEGFA-225ENST00000523950 OSBPL3Q9H4L5 887 aa15.16■□□□□ 0.02
VEGFA-225ENST00000523950 ZNF112Q9UJU3 913 aa15.16■□□□□ 0.02
VEGFA-225ENST00000523950 FZD1Q9UP38 647 aa15.16■□□□□ 0.02
VEGFA-225ENST00000523950 GTF3C3Q9Y5Q9 886 aa15.16■□□□□ 0.02
VEGFA-225ENST00000523950 CSADQ9Y600 493 aa15.16■□□□□ 0.02
VEGFA-225ENST00000523950 CEP350Q5VT06 3117 aa15.15■□□□□ 0.02
VEGFA-225ENST00000523950 DDX60LQ5H9U9 1706 aaKnown RBP15.15■□□□□ 0.02
VEGFA-225ENST00000523950 DDTLA6NHG4 134 aaPredicted RBP15.15■□□□□ 0.02
VEGFA-225ENST00000523950 AOC2O75106 756 aa15.15■□□□□ 0.02
VEGFA-225ENST00000523950 USP5P45974 858 aa15.15■□□□□ 0.02
VEGFA-225ENST00000523950 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.15■□□□□ 0.02
VEGFA-225ENST00000523950 WRNIP1Q96S55 665 aa15.15■□□□□ 0.02
VEGFA-225ENST00000523950 PI4KBQ9UBF8 816 aa15.15■□□□□ 0.02
VEGFA-225ENST00000523950 HERC5Q9UII4 1024 aaKnown RBP15.15■□□□□ 0.02
VEGFA-225ENST00000523950 HLA-DOAP06340 250 aa15.14■□□□□ 0.01
VEGFA-225ENST00000523950 NEFLP07196 543 aa15.14■□□□□ 0.01
VEGFA-225ENST00000523950 VGLL4Q14135 290 aa15.14■□□□□ 0.01
VEGFA-225ENST00000523950 NOL9Q5SY16 702 aaKnown RBP15.14■□□□□ 0.01
VEGFA-225ENST00000523950 SPRYD7Q5W111 196 aa15.14■□□□□ 0.01
VEGFA-225ENST00000523950 MAPKAPK5Q8IW41 473 aa15.14■□□□□ 0.01
VEGFA-225ENST00000523950 APPBP2Q92624 585 aa15.14■□□□□ 0.01
VEGFA-225ENST00000523950 EVI5LQ96CN4 794 aa15.14■□□□□ 0.01
VEGFA-225ENST00000523950 WNK4Q96J92 1243 aa15.14■□□□□ 0.01
VEGFA-225ENST00000523950 WBP1LQ9NX94 342 aa15.14■□□□□ 0.01
VEGFA-225ENST00000523950 SIPA1L1O43166 1804 aa15.14■□□□□ 0.01
VEGFA-225ENST00000523950 DOCK1Q14185 1865 aa15.14■□□□□ 0.01
VEGFA-225ENST00000523950 RNF113AO15541 343 aaKnown RBP15.13■□□□□ 0.01
VEGFA-225ENST00000523950 CA12O43570 354 aa15.13■□□□□ 0.01
VEGFA-225ENST00000523950 HSPA1AP0DMV8 641 aaKnown RBP15.13■□□□□ 0.01
VEGFA-225ENST00000523950 HSPA1BP0DMV9 641 aaKnown RBP15.13■□□□□ 0.01
VEGFA-225ENST00000523950 KIF23Q02241 960 aaPredicted RBP15.13■□□□□ 0.01
VEGFA-225ENST00000523950 SREBF2Q12772 1141 aa15.13■□□□□ 0.01
VEGFA-225ENST00000523950 MIGA2Q7L4E1 593 aa15.13■□□□□ 0.01
VEGFA-225ENST00000523950 FOXP4Q8IVH2 680 aaPredicted RBP15.13■□□□□ 0.01
VEGFA-225ENST00000523950 PLEKHM2Q8IWE5 1019 aa15.13■□□□□ 0.01
VEGFA-225ENST00000523950 AIDAQ96BJ3 306 aa15.13■□□□□ 0.01
VEGFA-225ENST00000523950 CLMNQ96JQ2 1002 aa15.13■□□□□ 0.01
VEGFA-225ENST00000523950 FSD1Q9BTV5 496 aa15.13■□□□□ 0.01
VEGFA-225ENST00000523950 BEGAINQ9BUH8 593 aa15.13■□□□□ 0.01
VEGFA-225ENST00000523950 TAOK2Q9UL54 1235 aa15.13■□□□□ 0.01
VEGFA-225ENST00000523950 MANSC4A6NHS7 340 aaPredicted RBP15.12■□□□□ 0.01
VEGFA-225ENST00000523950 SPDYE5A6NIY4 337 aa15.12■□□□□ 0.01
VEGFA-225ENST00000523950 MBD4O95243 580 aa15.12■□□□□ 0.01
VEGFA-225ENST00000523950 INHBEP58166 350 aa15.12■□□□□ 0.01
VEGFA-225ENST00000523950 TTC6Q86TZ1 520 aa15.12■□□□□ 0.01
VEGFA-225ENST00000523950 METTL16Q86W50 562 aaKnown RBP15.12■□□□□ 0.01
VEGFA-225ENST00000523950 ERO1BQ86YB8 467 aa15.12■□□□□ 0.01
VEGFA-225ENST00000523950 LCORLQ8N3X6 602 aa15.12■□□□□ 0.01
VEGFA-225ENST00000523950 ELP3Q9H9T3 547 aa15.12■□□□□ 0.01
VEGFA-225ENST00000523950 ATP8A2Q9NTI2 1148 aa15.12■□□□□ 0.01
VEGFA-225ENST00000523950 SNCAIPQ9Y6H5 919 aa15.12■□□□□ 0.01
VEGFA-225ENST00000523950 PHF20L1A8MW92 1017 aa15.11■□□□□ 0.01
VEGFA-225ENST00000523950 OPTNQ96CV9 577 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms