RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 ZC3H12CQ9C0D7 883 aaKnown RBP7.7□□□□□ -1.18
NSMCE2-211ENST00000523549 GADD45BO75293 160 aaPredicted RBP7.69□□□□□ -1.18
NSMCE2-211ENST00000523549 CD8BP10966 210 aa7.69□□□□□ -1.18
NSMCE2-211ENST00000523549 FUT4P22083 530 aa7.69□□□□□ -1.18
NSMCE2-211ENST00000523549 PLCL1Q15111 1095 aa7.69□□□□□ -1.18
NSMCE2-211ENST00000523549 MKNK2Q9HBH9 465 aa7.69□□□□□ -1.18
NSMCE2-211ENST00000523549 VAV3Q9UKW4 847 aa7.69□□□□□ -1.18
NSMCE2-211ENST00000523549 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.69□□□□□ -1.18
NSMCE2-211ENST00000523549 PRKCQQ04759 706 aa7.68□□□□□ -1.18
NSMCE2-211ENST00000523549 TTLL4Q14679 1199 aa7.68□□□□□ -1.18
NSMCE2-211ENST00000523549 FAM181AQ8N9Y4 354 aa7.68□□□□□ -1.18
NSMCE2-211ENST00000523549 RBCK1Q9BYM8 510 aa7.68□□□□□ -1.18
NSMCE2-211ENST00000523549 PIDD1Q9HB75 910 aa7.68□□□□□ -1.18
NSMCE2-211ENST00000523549 LEFTY1O75610 366 aa7.67□□□□□ -1.18
NSMCE2-211ENST00000523549 ATG4DQ86TL0 474 aaPredicted RBP7.67□□□□□ -1.18
NSMCE2-211ENST00000523549 STK35Q8TDR2 534 aa7.67□□□□□ -1.18
NSMCE2-211ENST00000523549 DMRTB1Q96MA1 342 aa7.67□□□□□ -1.18
NSMCE2-211ENST00000523549 DUSP23Q9BVJ7 150 aa7.67□□□□□ -1.18
NSMCE2-211ENST00000523549 KRTAP4-7Q9BYR0 210 aa7.67□□□□□ -1.18
NSMCE2-211ENST00000523549 TMEM39AQ9NV64 488 aa7.67□□□□□ -1.18
NSMCE2-211ENST00000523549 PCOLCE2Q9UKZ9 415 aa7.67□□□□□ -1.18
NSMCE2-211ENST00000523549 ERCC6L2Q5T890 1561 aa7.67□□□□□ -1.18
NSMCE2-211ENST00000523549 BIN1O00499 593 aa7.66□□□□□ -1.18
NSMCE2-211ENST00000523549 NEFMP07197 916 aa7.66□□□□□ -1.18
NSMCE2-211ENST00000523549 OXCT1P55809 520 aa7.66□□□□□ -1.18
NSMCE2-211ENST00000523549 ZC3H12AQ5D1E8 599 aaKnown RBP7.66□□□□□ -1.18
NSMCE2-211ENST00000523549 FBXO41Q8TF61 875 aa7.66□□□□□ -1.18
NSMCE2-211ENST00000523549 MBNL3Q9NUK0 354 aaKnown RBP7.66□□□□□ -1.18
NSMCE2-211ENST00000523549 CACNA2D2Q9NY47 1150 aa7.66□□□□□ -1.18
NSMCE2-211ENST00000523549 ADAMTS6Q9UKP5 1117 aa7.66□□□□□ -1.18
NSMCE2-211ENST00000523549 PLAGL2Q9UPG8 496 aa7.66□□□□□ -1.18
NSMCE2-211ENST00000523549 RNASE1P07998 156 aaKnown RBP7.65□□□□□ -1.18
NSMCE2-211ENST00000523549 HCLS1P14317 486 aaPredicted RBP7.65□□□□□ -1.18
NSMCE2-211ENST00000523549 FCGRTP55899 365 aa7.65□□□□□ -1.18
NSMCE2-211ENST00000523549 DTHD1Q6ZMT9 781 aa7.65□□□□□ -1.18
NSMCE2-211ENST00000523549 FAM214BQ7L5A3 538 aa7.65□□□□□ -1.18
NSMCE2-211ENST00000523549 RNGTTO60942 597 aaKnown RBP7.64□□□□□ -1.19
NSMCE2-211ENST00000523549 XRCC5P13010 732 aaKnown RBP7.64□□□□□ -1.19
NSMCE2-211ENST00000523549 CD96P40200 585 aa7.64□□□□□ -1.19
NSMCE2-211ENST00000523549 PPP2R3AQ06190 1150 aa7.64□□□□□ -1.19
NSMCE2-211ENST00000523549 IFI16Q16666 785 aaKnown RBP7.64□□□□□ -1.19
NSMCE2-211ENST00000523549 PI16Q6UXB8 463 aa7.64□□□□□ -1.19
NSMCE2-211ENST00000523549 TMC1Q8TDI8 760 aa7.64□□□□□ -1.19
NSMCE2-211ENST00000523549 ARNTP27540 789 aa7.63□□□□□ -1.19
NSMCE2-211ENST00000523549 ERVK-24P63145 666 aa7.63□□□□□ -1.19
NSMCE2-211ENST00000523549 ZNF252P-AS1Q0IIN9 211 aa7.63□□□□□ -1.19
NSMCE2-211ENST00000523549 RNF214Q8ND24 703 aa7.63□□□□□ -1.19
NSMCE2-211ENST00000523549 KCNB2Q92953 911 aa7.63□□□□□ -1.19
NSMCE2-211ENST00000523549 ISL2Q96A47 359 aa7.63□□□□□ -1.19
NSMCE2-211ENST00000523549 HEXIM2Q96MH2 286 aaKnown RBP7.63□□□□□ -1.19
NSMCE2-211ENST00000523549 BCO2Q9BYV7 579 aa7.63□□□□□ -1.19
NSMCE2-211ENST00000523549 TNKS2Q9H2K2 1166 aa7.63□□□□□ -1.19
NSMCE2-211ENST00000523549 PPP4R2Q9NY27 417 aa7.63□□□□□ -1.19
NSMCE2-211ENST00000523549 CEACAM5P06731 702 aa7.62□□□□□ -1.19
NSMCE2-211ENST00000523549 AOC3Q16853 763 aa7.62□□□□□ -1.19
NSMCE2-211ENST00000523549 SULF2Q8IWU5 870 aa7.62□□□□□ -1.19
NSMCE2-211ENST00000523549 RC3H2Q9HBD1 1191 aaKnown RBP7.62□□□□□ -1.19
NSMCE2-211ENST00000523549 GPN3Q9UHW5 284 aaPredicted RBP7.62□□□□□ -1.19
NSMCE2-211ENST00000523549 TMEM265A0A087WTH1 108 aa7.61□□□□□ -1.19
NSMCE2-211ENST00000523549 NME2P22392 152 aa7.61□□□□□ -1.19
NSMCE2-211ENST00000523549 HNRNPUQ00839 825 aaKnown RBP eCLIP7.61□□□□□ -1.19
NSMCE2-211ENST00000523549 DSC3Q14574 896 aa7.61□□□□□ -1.19
NSMCE2-211ENST00000523549 ZNF648Q5T619 568 aaPredicted RBP7.61□□□□□ -1.19
NSMCE2-211ENST00000523549 TMC7Q7Z402 723 aa7.61□□□□□ -1.19
NSMCE2-211ENST00000523549 NLRP2Q9NX02 1062 aa7.61□□□□□ -1.19
NSMCE2-211ENST00000523549 HECW2Q9P2P5 1572 aa7.61□□□□□ -1.19
NSMCE2-211ENST00000523549 WDR62O43379 1518 aa7.61□□□□□ -1.19
NSMCE2-211ENST00000523549 NTF4P34130 210 aa7.6□□□□□ -1.19
NSMCE2-211ENST00000523549 LRRN4CLQ8ND94 238 aa7.6□□□□□ -1.19
NSMCE2-211ENST00000523549 PI4K2BQ8TCG2 481 aa7.6□□□□□ -1.19
NSMCE2-211ENST00000523549 GPBAR1Q8TDU6 330 aa7.6□□□□□ -1.19
NSMCE2-211ENST00000523549 TMEM40Q8WWA1 233 aa7.6□□□□□ -1.19
NSMCE2-211ENST00000523549 HRASLS5Q96KN8 279 aa7.6□□□□□ -1.19
NSMCE2-211ENST00000523549 SNX11Q9Y5W9 270 aa7.6□□□□□ -1.19
NSMCE2-211ENST00000523549 LAMC3Q9Y6N6 1575 aa7.59□□□□□ -1.19
NSMCE2-211ENST00000523549 RING1Q06587 406 aa7.59□□□□□ -1.19
NSMCE2-211ENST00000523549 NXPE4Q6UWF7 544 aa7.59□□□□□ -1.19
NSMCE2-211ENST00000523549 MPRIPQ6WCQ1 1025 aa7.59□□□□□ -1.19
NSMCE2-211ENST00000523549 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.59□□□□□ -1.19
NSMCE2-211ENST00000523549 TOP6BLQ8N6T0 577 aa7.59□□□□□ -1.19
NSMCE2-211ENST00000523549 C3orf58Q8NDZ4 430 aa7.59□□□□□ -1.19
NSMCE2-211ENST00000523549 FAM168AQ92567 244 aa7.59□□□□□ -1.19
NSMCE2-211ENST00000523549 NECAB3Q96P71 396 aaPredicted RBP7.59□□□□□ -1.19
NSMCE2-211ENST00000523549 EMILIN2Q9BXX0 1053 aa7.59□□□□□ -1.19
NSMCE2-211ENST00000523549 SOWAHDA6NJG2 315 aa7.58□□□□□ -1.2
NSMCE2-211ENST00000523549 IGF2BP3O00425 579 aaKnown RBP eCLIP7.58□□□□□ -1.2
NSMCE2-211ENST00000523549 BMP6P22004 513 aa7.58□□□□□ -1.2
NSMCE2-211ENST00000523549 MAP1SQ66K74 1059 aaPredicted RBP7.58□□□□□ -1.2
NSMCE2-211ENST00000523549 CCER1Q8TC90 406 aaPredicted RBP7.58□□□□□ -1.2
NSMCE2-211ENST00000523549 AKAP2Q9Y2D5 859 aa7.58□□□□□ -1.2
NSMCE2-211ENST00000523549 DISP3Q9P2K9 1392 aa7.58□□□□□ -1.2
NSMCE2-211ENST00000523549 MRC2Q9UBG0 1479 aa7.57□□□□□ -1.2
NSMCE2-211ENST00000523549 FARP2O94887 1054 aaPredicted RBP7.57□□□□□ -1.2
NSMCE2-211ENST00000523549 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.57□□□□□ -1.2
NSMCE2-211ENST00000523549 SLC23A3Q6PIS1 610 aa7.57□□□□□ -1.2
NSMCE2-211ENST00000523549 SSU72Q9NP77 194 aaKnown RBP7.57□□□□□ -1.2
NSMCE2-211ENST00000523549 NCAPD3P42695 1498 aa7.56□□□□□ -1.2
NSMCE2-211ENST00000523549 DBX1A6NMT0 343 aa7.56□□□□□ -1.2
NSMCE2-211ENST00000523549 ZNF124Q15973 351 aa7.56□□□□□ -1.2
NSMCE2-211ENST00000523549 ENOX2Q16206 610 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms