RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 IL25Q9H293 177 aa8.26□□□□□ -1.09
CSMD1-211ENST00000523062 CHMP5Q9NZZ3 219 aa8.26□□□□□ -1.09
CSMD1-211ENST00000523062 SCN7AQ01118 1682 aa8.26□□□□□ -1.09
CSMD1-211ENST00000523062 MYH3P11055 1940 aa8.25□□□□□ -1.09
CSMD1-211ENST00000523062 RTL9Q8NET4 1388 aa8.25□□□□□ -1.09
CSMD1-211ENST00000523062 A0A1B0GUL7 405 aa8.25□□□□□ -1.09
CSMD1-211ENST00000523062 RPS6KA4O75676 772 aa8.25□□□□□ -1.09
CSMD1-211ENST00000523062 NTSR2O95665 410 aa8.25□□□□□ -1.09
CSMD1-211ENST00000523062 HSPA4P34932 840 aa8.25□□□□□ -1.09
CSMD1-211ENST00000523062 MCM2P49736 904 aa8.25□□□□□ -1.09
CSMD1-211ENST00000523062 NMIQ13287 307 aaPredicted RBP8.25□□□□□ -1.09
CSMD1-211ENST00000523062 METTL24Q5JXM2 366 aa8.25□□□□□ -1.09
CSMD1-211ENST00000523062 SV2AQ7L0J3 742 aa8.25□□□□□ -1.09
CSMD1-211ENST00000523062 SYNE4Q8N205 404 aa8.25□□□□□ -1.09
CSMD1-211ENST00000523062 NEUROD6Q96NK8 337 aa8.25□□□□□ -1.09
CSMD1-211ENST00000523062 CCDC85AQ96PX6 553 aaPredicted RBP8.25□□□□□ -1.09
CSMD1-211ENST00000523062 DNAJC2Q99543 621 aaKnown RBP8.25□□□□□ -1.09
CSMD1-211ENST00000523062 GREM2Q9H772 168 aa8.25□□□□□ -1.09
CSMD1-211ENST00000523062 SNRKQ9NRH2 765 aa8.25□□□□□ -1.09
CSMD1-211ENST00000523062 ENAMQ9NRM1 1142 aa8.25□□□□□ -1.09
CSMD1-211ENST00000523062 CCNL1Q9UK58 526 aaPredicted RBP8.25□□□□□ -1.09
CSMD1-211ENST00000523062 NIP7Q9Y221 180 aaKnown RBP eCLIP8.25□□□□□ -1.09
CSMD1-211ENST00000523062 LAMB2P55268 1798 aa8.25□□□□□ -1.09
CSMD1-211ENST00000523062 SPEF2Q9C093 1822 aa8.24□□□□□ -1.09
CSMD1-211ENST00000523062 MED23Q9ULK4 1368 aa8.24□□□□□ -1.09
CSMD1-211ENST00000523062 PHF20L1A8MW92 1017 aa8.24□□□□□ -1.09
CSMD1-211ENST00000523062 CLCN1P35523 988 aa8.24□□□□□ -1.09
CSMD1-211ENST00000523062 NFKBIBQ15653 356 aa8.24□□□□□ -1.09
CSMD1-211ENST00000523062 ATP2B3Q16720 1220 aa8.24□□□□□ -1.09
CSMD1-211ENST00000523062 CCDC158Q5M9N0 1113 aa8.24□□□□□ -1.09
CSMD1-211ENST00000523062 GORABQ5T7V8 394 aa8.24□□□□□ -1.09
CSMD1-211ENST00000523062 LDHAL6AQ6ZMR3 332 aa8.24□□□□□ -1.09
CSMD1-211ENST00000523062 PTF1AQ7RTS3 328 aa8.24□□□□□ -1.09
CSMD1-211ENST00000523062 VWA5B2Q8N398 1253 aa8.24□□□□□ -1.09
CSMD1-211ENST00000523062 QTRT2Q9H974 415 aaKnown RBP8.24□□□□□ -1.09
CSMD1-211ENST00000523062 CNNM1Q9NRU3 951 aa8.24□□□□□ -1.09
CSMD1-211ENST00000523062 PALD1Q9ULE6 856 aa8.24□□□□□ -1.09
CSMD1-211ENST00000523062 CCDC171Q6TFL3 1326 aa8.24□□□□□ -1.09
CSMD1-211ENST00000523062 MROH5Q6ZUA9 1318 aa8.24□□□□□ -1.09
CSMD1-211ENST00000523062 LY75O60449 1722 aa8.23□□□□□ -1.09
CSMD1-211ENST00000523062 A0A0D9SFI3 127 aa8.23□□□□□ -1.09
CSMD1-211ENST00000523062 FAM177BA6PVY3 158 aa8.23□□□□□ -1.09
CSMD1-211ENST00000523062 IFIT1P09914 478 aaKnown RBP8.23□□□□□ -1.09
CSMD1-211ENST00000523062 HCLS1P14317 486 aaPredicted RBP8.23□□□□□ -1.09
CSMD1-211ENST00000523062 NDUFV2P19404 249 aa8.23□□□□□ -1.09
CSMD1-211ENST00000523062 DDIT3P35638 169 aa8.23□□□□□ -1.09
CSMD1-211ENST00000523062 NEK4P51957 841 aa8.23□□□□□ -1.09
CSMD1-211ENST00000523062 TIMM10P62072 90 aa8.23□□□□□ -1.09
CSMD1-211ENST00000523062 LRRFIP1Q32MZ4 808 aaKnown RBP8.23□□□□□ -1.09
CSMD1-211ENST00000523062 CCDC152Q4G0S7 254 aa8.23□□□□□ -1.09
CSMD1-211ENST00000523062 C4orf48Q5BLP8 95 aa8.23□□□□□ -1.09
CSMD1-211ENST00000523062 TTC39AQ5SRH9 613 aa8.23□□□□□ -1.09
CSMD1-211ENST00000523062 KBTBD3Q8NAB2 608 aa8.23□□□□□ -1.09
CSMD1-211ENST00000523062 GALNT6Q8NCL4 622 aa8.23□□□□□ -1.09
CSMD1-211ENST00000523062 SPIRE2Q8WWL2 714 aa8.23□□□□□ -1.09
CSMD1-211ENST00000523062 FAM227BQ96M60 508 aa8.23□□□□□ -1.09
CSMD1-211ENST00000523062 PAG1Q9NWQ8 432 aa8.23□□□□□ -1.09
CSMD1-211ENST00000523062 NARFQ9UHQ1 456 aa8.23□□□□□ -1.09
CSMD1-211ENST00000523062 RTCBQ9Y3I0 505 aaKnown RBP8.23□□□□□ -1.09
CSMD1-211ENST00000523062 RIPOR2Q9Y4F9 1068 aa8.23□□□□□ -1.09
CSMD1-211ENST00000523062 SBF2Q86WG5 1849 aa8.22□□□□□ -1.09
CSMD1-211ENST00000523062 KRTAP9-6A0A140TA67 174 aa8.22□□□□□ -1.09
CSMD1-211ENST00000523062 GOLIM4O00461 696 aa8.22□□□□□ -1.09
CSMD1-211ENST00000523062 ZKSCAN1P17029 563 aaPredicted RBP8.22□□□□□ -1.09
CSMD1-211ENST00000523062 ADORA1P30542 326 aa8.22□□□□□ -1.09
CSMD1-211ENST00000523062 IGHMBP2P38935 993 aaKnown RBP8.22□□□□□ -1.09
CSMD1-211ENST00000523062 KCNJ4P48050 445 aa8.22□□□□□ -1.09
CSMD1-211ENST00000523062 KCNQ4P56696 695 aa8.22□□□□□ -1.09
CSMD1-211ENST00000523062 PTH1RQ03431 593 aa8.22□□□□□ -1.09
CSMD1-211ENST00000523062 FAM182BQ5T319 152 aa8.22□□□□□ -1.09
CSMD1-211ENST00000523062 FAM196AQ6ZSG2 479 aa8.22□□□□□ -1.09
CSMD1-211ENST00000523062 DDX46Q7L014 1031 aaKnown RBP8.22□□□□□ -1.09
CSMD1-211ENST00000523062 Q8N3U1 123 aa8.22□□□□□ -1.09
CSMD1-211ENST00000523062 KCNB2Q92953 911 aa8.22□□□□□ -1.09
CSMD1-211ENST00000523062 EDC3Q96F86 508 aaKnown RBP8.22□□□□□ -1.09
CSMD1-211ENST00000523062 XAGE2Q96GT9 111 aa8.22□□□□□ -1.09
CSMD1-211ENST00000523062 NYXQ9GZU5 481 aa8.22□□□□□ -1.09
CSMD1-211ENST00000523062 RBM8AQ9Y5S9 174 aaKnown RBP8.22□□□□□ -1.09
CSMD1-211ENST00000523062 SNX14Q9Y5W7 946 aa8.22□□□□□ -1.09
CSMD1-211ENST00000523062 DDX60Q8IY21 1712 aaKnown RBP8.22□□□□□ -1.09
CSMD1-211ENST00000523062 C4BP0C0L5 1744 aa8.21□□□□□ -1.09
CSMD1-211ENST00000523062 SLC35F4A4IF30 521 aa8.21□□□□□ -1.1
CSMD1-211ENST00000523062 SPDYE5A6NIY4 337 aa8.21□□□□□ -1.1
CSMD1-211ENST00000523062 PDE8BO95263 885 aa8.21□□□□□ -1.1
CSMD1-211ENST00000523062 SLC5A1P13866 664 aa8.21□□□□□ -1.1
CSMD1-211ENST00000523062 HMGB2P26583 209 aaKnown RBP8.21□□□□□ -1.1
CSMD1-211ENST00000523062 CTHP32929 405 aa8.21□□□□□ -1.1
CSMD1-211ENST00000523062 PUM3Q15397 648 aaKnown RBP8.21□□□□□ -1.1
CSMD1-211ENST00000523062 RNF20Q5VTR2 975 aa8.21□□□□□ -1.1
CSMD1-211ENST00000523062 USPL1Q5W0Q7 1092 aa8.21□□□□□ -1.1
CSMD1-211ENST00000523062 PRPF40BQ6NWY9 871 aaKnown RBP8.21□□□□□ -1.1
CSMD1-211ENST00000523062 LYPD4Q6UWN0 246 aa8.21□□□□□ -1.1
CSMD1-211ENST00000523062 LYPD8Q6UX82 237 aa8.21□□□□□ -1.1
CSMD1-211ENST00000523062 KRT27Q7Z3Y8 459 aa8.21□□□□□ -1.1
CSMD1-211ENST00000523062 VGLL2Q8N8G2 317 aa8.21□□□□□ -1.1
CSMD1-211ENST00000523062 MAP4K1Q92918 833 aa8.21□□□□□ -1.1
CSMD1-211ENST00000523062 ZNF512BQ96KM6 892 aaPredicted RBP8.21□□□□□ -1.1
CSMD1-211ENST00000523062 CDC5LQ99459 802 aaKnown RBP8.21□□□□□ -1.1
CSMD1-211ENST00000523062 MPHOSPH8Q99549 860 aa8.21□□□□□ -1.1
CSMD1-211ENST00000523062 TM6SF1Q9BZW5 370 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms