RNA–Protein interactions for RNA: ENST00000522875.5

PVT1-214, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 922 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-214ENST00000522875 HOXB4P17483 251 aaPredicted RBP9.47□□□□□ -0.89
PVT1-214ENST00000522875 NBPF8Q3BBV2 869 aa9.47□□□□□ -0.89
PVT1-214ENST00000522875 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.47□□□□□ -0.89
PVT1-214ENST00000522875 NEDD1Q8NHV4 660 aa9.47□□□□□ -0.89
PVT1-214ENST00000522875 RIMS2Q9UQ26 1411 aa9.47□□□□□ -0.89
PVT1-214ENST00000522875 LMTK3Q96Q04 1460 aa9.47□□□□□ -0.89
PVT1-214ENST00000522875 UBR1Q8IWV7 1749 aa9.46□□□□□ -0.89
PVT1-214ENST00000522875 A0A096LPE4 126 aa9.46□□□□□ -0.9
PVT1-214ENST00000522875 A0A1W2PPZ6 126 aa9.46□□□□□ -0.9
PVT1-214ENST00000522875 ARHGEF15O94989 841 aa9.46□□□□□ -0.9
PVT1-214ENST00000522875 SRCIN1Q9C0H9 1055 aa9.46□□□□□ -0.9
PVT1-214ENST00000522875 MUC3BQ9H195 1237 aa9.46□□□□□ -0.9
PVT1-214ENST00000522875 SH2B1Q9NRF2 756 aaPredicted RBP9.46□□□□□ -0.9
PVT1-214ENST00000522875 FAM8A1Q9UBU6 413 aa9.46□□□□□ -0.9
PVT1-214ENST00000522875 EID1Q9Y6B2 187 aa9.46□□□□□ -0.9
PVT1-214ENST00000522875 ADGRF5Q8IZF2 1346 aa9.46□□□□□ -0.9
PVT1-214ENST00000522875 CEP170BQ9Y4F5 1589 aaPredicted RBP9.46□□□□□ -0.9
PVT1-214ENST00000522875 COL9A3Q14050 684 aaPredicted RBP9.45□□□□□ -0.9
PVT1-214ENST00000522875 TSNAXIP1Q2TAA8 658 aa9.45□□□□□ -0.9
PVT1-214ENST00000522875 LDLRAD1Q5T700 205 aa9.45□□□□□ -0.9
PVT1-214ENST00000522875 C3orf58Q8NDZ4 430 aa9.45□□□□□ -0.9
PVT1-214ENST00000522875 BACH2Q9BYV9 841 aa9.45□□□□□ -0.9
PVT1-214ENST00000522875 ADAM19Q9H013 955 aa9.45□□□□□ -0.9
PVT1-214ENST00000522875 RRAGCQ9HB90 399 aa9.45□□□□□ -0.9
PVT1-214ENST00000522875 PPP4R2Q9NY27 417 aa9.45□□□□□ -0.9
PVT1-214ENST00000522875 NEURL4Q96JN8 1562 aa9.45□□□□□ -0.9
PVT1-214ENST00000522875 E9PSI1 815 aa9.44□□□□□ -0.9
PVT1-214ENST00000522875 RECKO95980 971 aa9.44□□□□□ -0.9
PVT1-214ENST00000522875 PTPRAP18433 802 aa9.44□□□□□ -0.9
PVT1-214ENST00000522875 BAG6P46379 1132 aa9.44□□□□□ -0.9
PVT1-214ENST00000522875 DGKGP49619 791 aa9.44□□□□□ -0.9
PVT1-214ENST00000522875 DTHD1Q6ZMT9 781 aa9.44□□□□□ -0.9
PVT1-214ENST00000522875 IL22RA1Q8N6P7 574 aa9.44□□□□□ -0.9
PVT1-214ENST00000522875 BSNDQ8WZ55 320 aa9.44□□□□□ -0.9
PVT1-214ENST00000522875 BCL11AQ9H165 835 aa9.44□□□□□ -0.9
PVT1-214ENST00000522875 ENAMQ9NRM1 1142 aa9.44□□□□□ -0.9
PVT1-214ENST00000522875 SOX13Q9UN79 622 aa9.44□□□□□ -0.9
PVT1-214ENST00000522875 TMEM2Q9UHN6 1383 aa9.44□□□□□ -0.9
PVT1-214ENST00000522875 NEXMIFQ5QGS0 1516 aa9.44□□□□□ -0.9
PVT1-214ENST00000522875 PPLO60437 1756 aa9.44□□□□□ -0.9
PVT1-214ENST00000522875 STRCQ7RTU9 1775 aa9.44□□□□□ -0.9
PVT1-214ENST00000522875 EPHA1P21709 976 aa9.43□□□□□ -0.9
PVT1-214ENST00000522875 ITPKAP23677 461 aa9.43□□□□□ -0.9
PVT1-214ENST00000522875 VAMP1P23763 118 aa9.43□□□□□ -0.9
PVT1-214ENST00000522875 LTKP29376 864 aa9.43□□□□□ -0.9
PVT1-214ENST00000522875 CDC25BP30305 580 aa9.43□□□□□ -0.9
PVT1-214ENST00000522875 GSTT1P30711 240 aa9.43□□□□□ -0.9
PVT1-214ENST00000522875 HSPA2P54652 639 aa9.43□□□□□ -0.9
PVT1-214ENST00000522875 SNRPNP63162 240 aaKnown RBP9.43□□□□□ -0.9
PVT1-214ENST00000522875 MEI1Q5TIA1 1274 aa9.43□□□□□ -0.9
PVT1-214ENST00000522875 ANKLE2Q86XL3 938 aa9.43□□□□□ -0.9
PVT1-214ENST00000522875 ZSCAN1Q8NBB4 408 aa9.43□□□□□ -0.9
PVT1-214ENST00000522875 AKAP2Q9Y2D5 859 aa9.43□□□□□ -0.9
PVT1-214ENST00000522875 IFT172Q9UG01 1749 aa9.42□□□□□ -0.9
PVT1-214ENST00000522875 KDM5AP29375 1690 aaKnown RBP9.42□□□□□ -0.9
PVT1-214ENST00000522875 PRAG1Q86YV5 1406 aa9.42□□□□□ -0.9
PVT1-214ENST00000522875 NID1P14543 1247 aa9.42□□□□□ -0.9
PVT1-214ENST00000522875 CDC27P30260 824 aa9.42□□□□□ -0.9
PVT1-214ENST00000522875 TXNDC11Q6PKC3 985 aa9.42□□□□□ -0.9
PVT1-214ENST00000522875 VN1R5Q7Z5H4 357 aa9.42□□□□□ -0.9
PVT1-214ENST00000522875 ZNF576Q9H609 170 aa9.42□□□□□ -0.9
PVT1-214ENST00000522875 PRDM6Q9NQX0 595 aa9.42□□□□□ -0.9
PVT1-214ENST00000522875 ZNF142P52746 1687 aaPredicted RBP9.42□□□□□ -0.9
PVT1-214ENST00000522875 MYOM2P54296 1465 aa9.41□□□□□ -0.9
PVT1-214ENST00000522875 MSL1Q68DK7 614 aa9.41□□□□□ -0.9
PVT1-214ENST00000522875 CRELD1Q96HD1 420 aa9.41□□□□□ -0.9
PVT1-214ENST00000522875 CARD11Q9BXL7 1154 aa9.41□□□□□ -0.9
PVT1-214ENST00000522875 ZFYVE9O95405 1425 aa9.4□□□□□ -0.9
PVT1-214ENST00000522875 ROCK2O75116 1388 aaKnown RBP9.4□□□□□ -0.9
PVT1-214ENST00000522875 FBXO24O75426 580 aa9.4□□□□□ -0.9
PVT1-214ENST00000522875 PTPN12Q05209 780 aaKnown RBP9.4□□□□□ -0.9
PVT1-214ENST00000522875 TMEM132EQ6IEE7 984 aa9.4□□□□□ -0.9
PVT1-214ENST00000522875 DMRTC2Q8IXT2 367 aaPredicted RBP9.4□□□□□ -0.9
PVT1-214ENST00000522875 TMEM87AQ8NBN3 555 aa9.4□□□□□ -0.9
PVT1-214ENST00000522875 C14orf93Q9H972 538 aaKnown RBP9.4□□□□□ -0.9
PVT1-214ENST00000522875 SLIT1O75093 1534 aa9.4□□□□□ -0.91
PVT1-214ENST00000522875 LINC01387J3KSC0 135 aa9.39□□□□□ -0.91
PVT1-214ENST00000522875 XRCC5P13010 732 aaKnown RBP9.39□□□□□ -0.91
PVT1-214ENST00000522875 FAAP100Q0VG06 881 aa9.39□□□□□ -0.91
PVT1-214ENST00000522875 LINC00114Q6XXX2 140 aa9.39□□□□□ -0.91
PVT1-214ENST00000522875 WFDC8Q8IUA0 241 aa9.39□□□□□ -0.91
PVT1-214ENST00000522875 SLC26A8Q96RN1 970 aa9.39□□□□□ -0.91
PVT1-214ENST00000522875 CLEC4MQ9H2X3 399 aaPredicted RBP9.39□□□□□ -0.91
PVT1-214ENST00000522875 PPME1Q9Y570 386 aa9.39□□□□□ -0.91
PVT1-214ENST00000522875 SCAF11Q99590 1463 aaKnown RBP9.39□□□□□ -0.91
PVT1-214ENST00000522875 ARHGAP23Q9P227 1491 aa9.39□□□□□ -0.91
PVT1-214ENST00000522875 USP31Q70CQ4 1352 aa9.38□□□□□ -0.91
PVT1-214ENST00000522875 FAM177BA6PVY3 158 aa9.38□□□□□ -0.91
PVT1-214ENST00000522875 ZNF157P51786 506 aaPredicted RBP9.38□□□□□ -0.91
PVT1-214ENST00000522875 ZNF423Q2M1K9 1284 aa9.38□□□□□ -0.91
PVT1-214ENST00000522875 HGSNATQ68CP4 663 aa9.38□□□□□ -0.91
PVT1-214ENST00000522875 ILDR2Q71H61 639 aa9.38□□□□□ -0.91
PVT1-214ENST00000522875 CACTIN-AS1Q8N1I8 211 aa9.38□□□□□ -0.91
PVT1-214ENST00000522875 TRIM11Q96F44 468 aa9.38□□□□□ -0.91
PVT1-214ENST00000522875 STK26Q9P289 416 aa9.38□□□□□ -0.91
PVT1-214ENST00000522875 TTF2Q9UNY4 1162 aaKnown RBP9.38□□□□□ -0.91
PVT1-214ENST00000522875 PIK3C2GO75747 1445 aa9.38□□□□□ -0.91
PVT1-214ENST00000522875 TRPM1Q7Z4N2 1603 aa9.38□□□□□ -0.91
PVT1-214ENST00000522875 PLEKHG1Q9ULL1 1385 aa9.37□□□□□ -0.91
PVT1-214ENST00000522875 RALGAPBQ86X10 1494 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms