RNA–Protein interactions for RNA: ENST00000522468.1

HMBOX1-209, Transcript of homeobox containing 1, humanhuman

TSL 3

Gene HMBOX1, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-209ENST00000522468 MGAMO43451 1857 aa17.41■□□□□ 0.38
HMBOX1-209ENST00000522468 CEP290O15078 2479 aa17.41■□□□□ 0.38
HMBOX1-209ENST00000522468 GPR75-ASB3A0A0A6YYF3 556 aa17.41■□□□□ 0.38
HMBOX1-209ENST00000522468 DDTLA6NHG4 134 aaPredicted RBP17.41■□□□□ 0.38
HMBOX1-209ENST00000522468 GNAI2P04899 355 aa17.41■□□□□ 0.38
HMBOX1-209ENST00000522468 RHBDL3P58872 404 aa17.41■□□□□ 0.38
HMBOX1-209ENST00000522468 MECOMQ03112 1051 aa17.41■□□□□ 0.38
HMBOX1-209ENST00000522468 GPAT2Q6NUI2 795 aa17.41■□□□□ 0.38
HMBOX1-209ENST00000522468 DZIP1Q86YF9 867 aaKnown RBP17.41■□□□□ 0.38
HMBOX1-209ENST00000522468 PDHXO00330 501 aa17.4■□□□□ 0.38
HMBOX1-209ENST00000522468 CXCL11O14625 94 aa17.4■□□□□ 0.38
HMBOX1-209ENST00000522468 NPM3O75607 178 aaKnown RBP17.4■□□□□ 0.38
HMBOX1-209ENST00000522468 GNRH1P01148 92 aa17.4■□□□□ 0.38
HMBOX1-209ENST00000522468 SLURP2P0DP57 97 aa17.4■□□□□ 0.38
HMBOX1-209ENST00000522468 ARID4AP29374 1257 aaPredicted RBP17.4■□□□□ 0.38
HMBOX1-209ENST00000522468 BTDP43251 543 aa17.4■□□□□ 0.38
HMBOX1-209ENST00000522468 SPTY2D1Q68D10 685 aaPredicted RBP17.4■□□□□ 0.38
HMBOX1-209ENST00000522468 PI16Q6UXB8 463 aa17.4■□□□□ 0.38
HMBOX1-209ENST00000522468 SLF2Q8IX21 1173 aa17.4■□□□□ 0.38
HMBOX1-209ENST00000522468 CDK5RAP2Q96SN8 1893 aa17.39■□□□□ 0.38
HMBOX1-209ENST00000522468 MYO5AQ9Y4I1 1855 aaKnown RBP17.39■□□□□ 0.38
HMBOX1-209ENST00000522468 COL2A1P02458 1487 aaPredicted RBP17.39■□□□□ 0.37
HMBOX1-209ENST00000522468 MAST2Q6P0Q8 1798 aa17.39■□□□□ 0.37
HMBOX1-209ENST00000522468 EN2P19622 333 aaPredicted RBP17.39■□□□□ 0.37
HMBOX1-209ENST00000522468 SLC9C1Q4G0N8 1177 aa17.39■□□□□ 0.37
HMBOX1-209ENST00000522468 SCYL3Q8IZE3 742 aa17.39■□□□□ 0.37
HMBOX1-209ENST00000522468 TMEM57Q8N5G2 664 aa17.39■□□□□ 0.37
HMBOX1-209ENST00000522468 SPATA5Q8NB90 893 aa17.39■□□□□ 0.37
HMBOX1-209ENST00000522468 FRAT1Q92837 279 aaPredicted RBP17.39■□□□□ 0.37
HMBOX1-209ENST00000522468 CLUAP1Q96AJ1 413 aa17.39■□□□□ 0.37
HMBOX1-209ENST00000522468 NSUN4Q96CB9 384 aaKnown RBP17.39■□□□□ 0.37
HMBOX1-209ENST00000522468 SIPA1L1O43166 1804 aa17.38■□□□□ 0.37
HMBOX1-209ENST00000522468 ATAD5Q96QE3 1844 aa17.38■□□□□ 0.37
HMBOX1-209ENST00000522468 A0A0G2JLL6 359 aaPredicted RBP17.38■□□□□ 0.37
HMBOX1-209ENST00000522468 BCRP11274 1271 aa17.38■□□□□ 0.37
HMBOX1-209ENST00000522468 PTPRAP18433 802 aa17.38■□□□□ 0.37
HMBOX1-209ENST00000522468 POLA2Q14181 598 aa17.38■□□□□ 0.37
HMBOX1-209ENST00000522468 ERICH6Q7L0X2 663 aa17.38■□□□□ 0.37
HMBOX1-209ENST00000522468 PRRT2Q7Z6L0 340 aaPredicted RBP17.38■□□□□ 0.37
HMBOX1-209ENST00000522468 TRIM47Q96LD4 638 aa17.38■□□□□ 0.37
HMBOX1-209ENST00000522468 NEUROD6Q96NK8 337 aa17.38■□□□□ 0.37
HMBOX1-209ENST00000522468 CPA4Q9UI42 421 aa17.38■□□□□ 0.37
HMBOX1-209ENST00000522468 AFG3L2Q9Y4W6 797 aa17.38■□□□□ 0.37
HMBOX1-209ENST00000522468 FOCADQ5VW36 1801 aa17.37■□□□□ 0.37
HMBOX1-209ENST00000522468 MCAMP43121 646 aa17.37■□□□□ 0.37
HMBOX1-209ENST00000522468 PRMT2P55345 433 aa17.37■□□□□ 0.37
HMBOX1-209ENST00000522468 KIF22Q14807 665 aa17.37■□□□□ 0.37
HMBOX1-209ENST00000522468 TBC1D9Q6ZT07 1266 aa17.37■□□□□ 0.37
HMBOX1-209ENST00000522468 NBPF11Q86T75 865 aa17.37■□□□□ 0.37
HMBOX1-209ENST00000522468 ZHX2Q9Y6X8 837 aa17.37■□□□□ 0.37
HMBOX1-209ENST00000522468 LOC285556D6RIA3 1793 aa17.36■□□□□ 0.37
HMBOX1-209ENST00000522468 TBC1D12O60347 775 aa17.36■□□□□ 0.37
HMBOX1-209ENST00000522468 CTNND1O60716 968 aaKnown RBP17.36■□□□□ 0.37
HMBOX1-209ENST00000522468 MAP4K4O95819 1239 aaPredicted RBP17.36■□□□□ 0.37
HMBOX1-209ENST00000522468 ZKSCAN2Q63HK3 967 aa17.36■□□□□ 0.37
HMBOX1-209ENST00000522468 SSH3Q8TE77 659 aa17.36■□□□□ 0.37
HMBOX1-209ENST00000522468 SH3TC2Q8TF17 1288 aa17.36■□□□□ 0.37
HMBOX1-209ENST00000522468 SRRDQ9UH36 339 aa17.36■□□□□ 0.37
HMBOX1-209ENST00000522468 RANBP2P49792 3224 aaKnown RBP17.36■□□□□ 0.37
HMBOX1-209ENST00000522468 CYP2C8P10632 490 aa17.35■□□□□ 0.37
HMBOX1-209ENST00000522468 PSMC4P43686 418 aa17.35■□□□□ 0.37
HMBOX1-209ENST00000522468 G3BP1Q13283 466 aaKnown RBP eCLIP17.35■□□□□ 0.37
HMBOX1-209ENST00000522468 PICALMQ13492 652 aa17.35■□□□□ 0.37
HMBOX1-209ENST00000522468 PARK7Q99497 189 aaKnown RBP17.35■□□□□ 0.37
HMBOX1-209ENST00000522468 TMEM106CQ9BVX2 250 aa17.35■□□□□ 0.37
HMBOX1-209ENST00000522468 GPR108Q9NPR9 543 aa17.35■□□□□ 0.37
HMBOX1-209ENST00000522468 OSBPP22059 807 aa17.34■□□□□ 0.37
HMBOX1-209ENST00000522468 FASTKD5Q7L8L6 764 aaKnown RBP17.34■□□□□ 0.37
HMBOX1-209ENST00000522468 ZSCAN29Q8IWY8 852 aaPredicted RBP17.34■□□□□ 0.37
HMBOX1-209ENST00000522468 PICK1Q9NRD5 415 aa17.34■□□□□ 0.37
HMBOX1-209ENST00000522468 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.34■□□□□ 0.37
HMBOX1-209ENST00000522468 SLC45A1Q9Y2W3 748 aa17.34■□□□□ 0.37
HMBOX1-209ENST00000522468 LDHCP07864 332 aa17.33■□□□□ 0.36
HMBOX1-209ENST00000522468 UQCRFS1P1P0C7P4 283 aa17.33■□□□□ 0.36
HMBOX1-209ENST00000522468 GSTO1P78417 241 aa17.33■□□□□ 0.36
HMBOX1-209ENST00000522468 ATP8B2P98198 1209 aa17.33■□□□□ 0.36
HMBOX1-209ENST00000522468 GORABQ5T7V8 394 aa17.33■□□□□ 0.36
HMBOX1-209ENST00000522468 DOCK3Q8IZD9 2030 aa17.33■□□□□ 0.36
HMBOX1-209ENST00000522468 RLBP1P12271 317 aa17.32■□□□□ 0.36
HMBOX1-209ENST00000522468 RRP1BQ14684 758 aaKnown RBP17.32■□□□□ 0.36
HMBOX1-209ENST00000522468 TNNI3KQ59H18 835 aa17.32■□□□□ 0.36
HMBOX1-209ENST00000522468 CCDC84Q86UT8 332 aaPredicted RBP17.32■□□□□ 0.36
HMBOX1-209ENST00000522468 DBNDD2Q9BQY9 259 aa17.32■□□□□ 0.36
HMBOX1-209ENST00000522468 OSBPL5Q9H0X9 879 aaPredicted RBP17.32■□□□□ 0.36
HMBOX1-209ENST00000522468 NOP58Q9Y2X3 529 aaKnown RBP17.32■□□□□ 0.36
HMBOX1-209ENST00000522468 FPGT-TNNI3KV9GXZ4 949 aa17.32■□□□□ 0.36
HMBOX1-209ENST00000522468 FAM196BA6NMK8 535 aa17.31■□□□□ 0.36
HMBOX1-209ENST00000522468 ZBTB7BO15156 539 aaPredicted RBP17.31■□□□□ 0.36
HMBOX1-209ENST00000522468 ECM2O94769 699 aaPredicted RBP17.31■□□□□ 0.36
HMBOX1-209ENST00000522468 MTFR1Q15390 333 aa17.31■□□□□ 0.36
HMBOX1-209ENST00000522468 SHISA4Q96DD7 197 aa17.31■□□□□ 0.36
HMBOX1-209ENST00000522468 ZNF512BQ96KM6 892 aaPredicted RBP17.31■□□□□ 0.36
HMBOX1-209ENST00000522468 RAI14Q9P0K7 980 aa17.31■□□□□ 0.36
HMBOX1-209ENST00000522468 SZT2Q5T011 3432 aa17.3■□□□□ 0.36
HMBOX1-209ENST00000522468 MYPNQ86TC9 1320 aa17.3■□□□□ 0.36
HMBOX1-209ENST00000522468 FMNL1O95466 1100 aaPredicted RBP17.3■□□□□ 0.36
HMBOX1-209ENST00000522468 MYCP01106 439 aaPredicted RBP17.3■□□□□ 0.36
HMBOX1-209ENST00000522468 CYP2E1P05181 493 aaPredicted RBP17.3■□□□□ 0.36
HMBOX1-209ENST00000522468 PPP4CP60510 307 aa17.3■□□□□ 0.36
HMBOX1-209ENST00000522468 SLC4A8Q2Y0W8 1093 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms