RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 ZNRF3Q9ULT6 936 aa5.26□□□□□ -1.57
HMGN1P28-201ENST00000521340 A0A0A0MRY4 1105 aa5.25□□□□□ -1.57
HMGN1P28-201ENST00000521340 DYRK3O43781 588 aa5.25□□□□□ -1.57
HMGN1P28-201ENST00000521340 LILRB5O75023 590 aa5.25□□□□□ -1.57
HMGN1P28-201ENST00000521340 TRIM37O94972 964 aa5.25□□□□□ -1.57
HMGN1P28-201ENST00000521340 AFF1P51825 1210 aaKnown RBP5.25□□□□□ -1.57
HMGN1P28-201ENST00000521340 CASP7P55210 303 aa5.25□□□□□ -1.57
HMGN1P28-201ENST00000521340 TBC1D8BQ0IIM8 1120 aa5.25□□□□□ -1.57
HMGN1P28-201ENST00000521340 TCEAL1Q15170 157 aa5.25□□□□□ -1.57
HMGN1P28-201ENST00000521340 ZMYM1Q5SVZ6 1142 aa5.25□□□□□ -1.57
HMGN1P28-201ENST00000521340 LLGL2Q6P1M3 1020 aa5.25□□□□□ -1.57
HMGN1P28-201ENST00000521340 ELMSAN1Q6PJG2 1045 aa5.25□□□□□ -1.57
HMGN1P28-201ENST00000521340 CCDC81Q6ZN84 652 aa5.25□□□□□ -1.57
HMGN1P28-201ENST00000521340 LRP10Q7Z4F1 713 aa5.25□□□□□ -1.57
HMGN1P28-201ENST00000521340 MICAL1Q8TDZ2 1067 aa5.25□□□□□ -1.57
HMGN1P28-201ENST00000521340 HNRNPLLQ8WVV9 542 aaKnown RBP5.25□□□□□ -1.57
HMGN1P28-201ENST00000521340 RNPC3Q96LT9 517 aaKnown RBP5.25□□□□□ -1.57
HMGN1P28-201ENST00000521340 MIR1-1HGQ9H1L0 117 aa5.25□□□□□ -1.57
HMGN1P28-201ENST00000521340 TNKS2Q9H2K2 1166 aa5.25□□□□□ -1.57
HMGN1P28-201ENST00000521340 SIRPGQ9P1W8 387 aa5.25□□□□□ -1.57
HMGN1P28-201ENST00000521340 SBNO2Q9Y2G9 1366 aa5.25□□□□□ -1.57
HMGN1P28-201ENST00000521340 H3BRJ5 948 aa5.24□□□□□ -1.57
HMGN1P28-201ENST00000521340 SMAD7O15105 426 aaKnown RBP5.24□□□□□ -1.57
HMGN1P28-201ENST00000521340 ZNF862O60290 1169 aa5.24□□□□□ -1.57
HMGN1P28-201ENST00000521340 SSBP05455 408 aaKnown RBP eCLIP5.24□□□□□ -1.57
HMGN1P28-201ENST00000521340 GSTP1P09211 210 aaKnown RBP5.24□□□□□ -1.57
HMGN1P28-201ENST00000521340 RPL6Q02878 288 aaKnown RBP5.24□□□□□ -1.57
HMGN1P28-201ENST00000521340 RING1Q06587 406 aa5.24□□□□□ -1.57
HMGN1P28-201ENST00000521340 IKBKEQ14164 716 aa5.24□□□□□ -1.57
HMGN1P28-201ENST00000521340 BMS1Q14692 1282 aaKnown RBP5.24□□□□□ -1.57
HMGN1P28-201ENST00000521340 SDE2Q6IQ49 451 aa5.24□□□□□ -1.57
HMGN1P28-201ENST00000521340 CKAP2LQ8IYA6 745 aa5.24□□□□□ -1.57
HMGN1P28-201ENST00000521340 CACTIN-AS1Q8N1I8 211 aa5.24□□□□□ -1.57
HMGN1P28-201ENST00000521340 NUDT8Q8WV74 236 aa5.24□□□□□ -1.57
HMGN1P28-201ENST00000521340 JARID2Q92833 1246 aaPredicted RBP5.24□□□□□ -1.57
HMGN1P28-201ENST00000521340 NACC1Q96RE7 527 aa5.24□□□□□ -1.57
HMGN1P28-201ENST00000521340 RBSNQ9H1K0 784 aa5.24□□□□□ -1.57
HMGN1P28-201ENST00000521340 KANSL2Q9H9L4 492 aa5.24□□□□□ -1.57
HMGN1P28-201ENST00000521340 PCDHGC5Q9Y5F6 944 aa5.24□□□□□ -1.57
HMGN1P28-201ENST00000521340 DNAJA2O60884 412 aa5.23□□□□□ -1.57
HMGN1P28-201ENST00000521340 DLGAP3O95886 979 aa5.23□□□□□ -1.57
HMGN1P28-201ENST00000521340 ADGRE1Q14246 886 aa5.23□□□□□ -1.57
HMGN1P28-201ENST00000521340 INPP5AQ14642 412 aa5.23□□□□□ -1.57
HMGN1P28-201ENST00000521340 MBTPS1Q14703 1052 aa5.23□□□□□ -1.57
HMGN1P28-201ENST00000521340 LRRC14Q15048 493 aa5.23□□□□□ -1.57
HMGN1P28-201ENST00000521340 SHISA2Q6UWI4 295 aa5.23□□□□□ -1.57
HMGN1P28-201ENST00000521340 JMYQ8N9B5 988 aa5.23□□□□□ -1.57
HMGN1P28-201ENST00000521340 GPBAR1Q8TDU6 330 aa5.23□□□□□ -1.57
HMGN1P28-201ENST00000521340 WNT8BQ93098 351 aa5.23□□□□□ -1.57
HMGN1P28-201ENST00000521340 WDR89Q96FK6 387 aaPredicted RBP5.23□□□□□ -1.57
HMGN1P28-201ENST00000521340 EMILIN2Q9BXX0 1053 aa5.23□□□□□ -1.57
HMGN1P28-201ENST00000521340 CCDC86Q9H6F5 360 aaKnown RBP5.23□□□□□ -1.57
HMGN1P28-201ENST00000521340 ANTXR1Q9H6X2 564 aa5.23□□□□□ -1.57
HMGN1P28-201ENST00000521340 JPH1Q9HDC5 661 aaPredicted RBP5.23□□□□□ -1.57
HMGN1P28-201ENST00000521340 SNTG2Q9NY99 539 aa5.23□□□□□ -1.57
HMGN1P28-201ENST00000521340 MEIS3P2A8K0S8 358 aa5.22□□□□□ -1.57
HMGN1P28-201ENST00000521340 C9orf172C9J069 976 aa5.22□□□□□ -1.57
HMGN1P28-201ENST00000521340 RGS9O75916 674 aaPredicted RBP5.22□□□□□ -1.57
HMGN1P28-201ENST00000521340 ELNP15502 786 aa5.22□□□□□ -1.57
HMGN1P28-201ENST00000521340 ZNF165P49910 485 aa5.22□□□□□ -1.57
HMGN1P28-201ENST00000521340 EIF6P56537 245 aaKnown RBP5.22□□□□□ -1.57
HMGN1P28-201ENST00000521340 PIP4K2BP78356 416 aa5.22□□□□□ -1.57
HMGN1P28-201ENST00000521340 AP3B2Q13367 1082 aa5.22□□□□□ -1.57
HMGN1P28-201ENST00000521340 SETDB1Q15047 1291 aa5.22□□□□□ -1.57
HMGN1P28-201ENST00000521340 CWF19L2Q2TBE0 894 aaKnown RBP5.22□□□□□ -1.57
HMGN1P28-201ENST00000521340 GDF6Q6KF10 455 aaPredicted RBP5.22□□□□□ -1.57
HMGN1P28-201ENST00000521340 CYFIP1Q7L576 1253 aa5.22□□□□□ -1.57
HMGN1P28-201ENST00000521340 LSRQ86X29 649 aaPredicted RBP5.22□□□□□ -1.57
HMGN1P28-201ENST00000521340 DMRTC2Q8IXT2 367 aaPredicted RBP5.22□□□□□ -1.57
HMGN1P28-201ENST00000521340 LILRB2Q8N423 598 aa5.22□□□□□ -1.57
HMGN1P28-201ENST00000521340 IL22RA1Q8N6P7 574 aa5.22□□□□□ -1.57
HMGN1P28-201ENST00000521340 GALNT11Q8NCW6 608 aa5.22□□□□□ -1.57
HMGN1P28-201ENST00000521340 LENG1Q96BZ8 264 aaPredicted RBP5.22□□□□□ -1.57
HMGN1P28-201ENST00000521340 ANAPC16Q96DE5 110 aa5.22□□□□□ -1.57
HMGN1P28-201ENST00000521340 KLHDC7BQ96G42 594 aa5.22□□□□□ -1.57
HMGN1P28-201ENST00000521340 CCDC113Q9H0I3 377 aa5.22□□□□□ -1.57
HMGN1P28-201ENST00000521340 OSGEPQ9NPF4 335 aa5.22□□□□□ -1.57
HMGN1P28-201ENST00000521340 KRT82Q9NSB4 513 aa5.22□□□□□ -1.57
HMGN1P28-201ENST00000521340 SAMM50Q9Y512 469 aa5.22□□□□□ -1.57
HMGN1P28-201ENST00000521340 MRPL42Q9Y6G3 142 aaKnown RBP5.22□□□□□ -1.57
HMGN1P28-201ENST00000521340 UPK3BL1B0FP48 263 aa5.21□□□□□ -1.58
HMGN1P28-201ENST00000521340 UPK3BL2E5RIL1 263 aa5.21□□□□□ -1.58
HMGN1P28-201ENST00000521340 ENPP3O14638 875 aa5.21□□□□□ -1.58
HMGN1P28-201ENST00000521340 FSCN2O14926 492 aa5.21□□□□□ -1.58
HMGN1P28-201ENST00000521340 ADAM11O75078 769 aa5.21□□□□□ -1.58
HMGN1P28-201ENST00000521340 DEAF1O75398 565 aaPredicted RBP5.21□□□□□ -1.58
HMGN1P28-201ENST00000521340 NFE2L2Q16236 605 aa5.21□□□□□ -1.58
HMGN1P28-201ENST00000521340 PRSS36Q5K4E3 855 aa5.21□□□□□ -1.58
HMGN1P28-201ENST00000521340 LRFN4Q6PJG9 635 aa5.21□□□□□ -1.58
HMGN1P28-201ENST00000521340 RUFY4Q6ZNE9 571 aa5.21□□□□□ -1.58
HMGN1P28-201ENST00000521340 TMA7Q9Y2S6 64 aaKnown RBP5.21□□□□□ -1.58
HMGN1P28-201ENST00000521340 PPME1Q9Y570 386 aa5.21□□□□□ -1.58
HMGN1P28-201ENST00000521340 A0A1W2PQH9 124 aa5.2□□□□□ -1.58
HMGN1P28-201ENST00000521340 LINC01387J3KSC0 135 aa5.2□□□□□ -1.58
HMGN1P28-201ENST00000521340 ACRP10323 421 aa5.2□□□□□ -1.58
HMGN1P28-201ENST00000521340 NTF4P34130 210 aa5.2□□□□□ -1.58
HMGN1P28-201ENST00000521340 C19orf57Q0VDD7 668 aa5.2□□□□□ -1.58
HMGN1P28-201ENST00000521340 KIF4BQ2VIQ3 1234 aa5.2□□□□□ -1.58
HMGN1P28-201ENST00000521340 ZC3H12AQ5D1E8 599 aaKnown RBP5.2□□□□□ -1.58
HMGN1P28-201ENST00000521340 MAP1SQ66K74 1059 aaPredicted RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms