RNA–Protein interactions for RNA: ENST00000521260.1

NPM1-207, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-207ENST00000521260 FUT8Q9BYC5 575 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 VCX3BQ9H321 246 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 VCX3AQ9NNX9 186 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 QPCTLQ9NXS2 382 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 LMCD1Q9NZU5 365 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 DDX25Q9UHL0 483 aaKnown RBP5.85□□□□□ -1.47
NPM1-207ENST00000521260 TMCO1Q9UM00 188 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 DDX19BQ9UMR2 479 aa5.85□□□□□ -1.47
NPM1-207ENST00000521260 PRDM15P57071 1507 aaPredicted RBP5.84□□□□□ -1.47
NPM1-207ENST00000521260 FGD6Q6ZV73 1430 aa5.84□□□□□ -1.47
NPM1-207ENST00000521260 RTL1A6NKG5 1358 aa5.84□□□□□ -1.47
NPM1-207ENST00000521260 AATKQ6ZMQ8 1374 aa5.84□□□□□ -1.47
NPM1-207ENST00000521260 ANKRD30BQ9BXX2 1392 aa5.84□□□□□ -1.47
NPM1-207ENST00000521260 LRRD1A4D1F6 860 aa5.84□□□□□ -1.47
NPM1-207ENST00000521260 CFAP99D6REC4 459 aa5.84□□□□□ -1.47
NPM1-207ENST00000521260 MEFVO15553 781 aaPredicted RBP5.84□□□□□ -1.47
NPM1-207ENST00000521260 PPP1R12BO60237 982 aaPredicted RBP5.84□□□□□ -1.47
NPM1-207ENST00000521260 ZEB2O60315 1214 aa5.84□□□□□ -1.47
NPM1-207ENST00000521260 BUB1BO60566 1050 aaPredicted RBP5.84□□□□□ -1.47
NPM1-207ENST00000521260 SHOX2O60902 331 aaPredicted RBP5.84□□□□□ -1.47
NPM1-207ENST00000521260 TADA3O75528 432 aa5.84□□□□□ -1.47
NPM1-207ENST00000521260 TMCC1O94876 653 aa5.84□□□□□ -1.47
NPM1-207ENST00000521260 CCDC166P0CW27 439 aa5.84□□□□□ -1.47
NPM1-207ENST00000521260 KCNA2P16389 499 aa5.84□□□□□ -1.47
NPM1-207ENST00000521260 ATP5JP18859 108 aa5.84□□□□□ -1.47
NPM1-207ENST00000521260 HSPA4P34932 840 aa5.84□□□□□ -1.47
NPM1-207ENST00000521260 EVCP57679 992 aa5.84□□□□□ -1.47
NPM1-207ENST00000521260 ETF1P62495 437 aaKnown RBP5.84□□□□□ -1.47
NPM1-207ENST00000521260 GUCA2AQ02747 115 aa5.84□□□□□ -1.47
NPM1-207ENST00000521260 PSME1Q06323 249 aa5.84□□□□□ -1.47
NPM1-207ENST00000521260 PPFIA1Q13136 1202 aa5.84□□□□□ -1.47
NPM1-207ENST00000521260 MTMR2Q13614 643 aa5.84□□□□□ -1.47
NPM1-207ENST00000521260 CUL4BQ13620 913 aa5.84□□□□□ -1.47
NPM1-207ENST00000521260 GNL2Q13823 731 aaKnown RBP5.84□□□□□ -1.47
NPM1-207ENST00000521260 INAQ16352 499 aa5.84□□□□□ -1.47
NPM1-207ENST00000521260 MAP3K11Q16584 847 aa5.84□□□□□ -1.47
NPM1-207ENST00000521260 LONRF2Q1L5Z9 754 aa5.84□□□□□ -1.47
NPM1-207ENST00000521260 Q4G0T1 1027 aa5.84□□□□□ -1.47
NPM1-207ENST00000521260 NAA16Q6N069 864 aaPredicted RBP5.84□□□□□ -1.47
NPM1-207ENST00000521260 KCNV1Q6PIU1 500 aa5.84□□□□□ -1.47
NPM1-207ENST00000521260 PEX5LQ8IYB4 626 aa5.84□□□□□ -1.47
NPM1-207ENST00000521260 ARHGAP18Q8N392 663 aa5.84□□□□□ -1.47
NPM1-207ENST00000521260 GALNT15Q8N3T1 639 aa5.84□□□□□ -1.47
NPM1-207ENST00000521260 PARD3BQ8TEW8 1205 aa5.84□□□□□ -1.47
NPM1-207ENST00000521260 TBC1D31Q96DN5 1066 aa5.84□□□□□ -1.47
NPM1-207ENST00000521260 DHTKD1Q96HY7 919 aaPredicted RBP5.84□□□□□ -1.47
NPM1-207ENST00000521260 IWS1Q96ST2 819 aa5.84□□□□□ -1.47
NPM1-207ENST00000521260 PPP1R12CQ9BZL4 782 aa5.84□□□□□ -1.47
NPM1-207ENST00000521260 KIAA1468Q9P260 1216 aa5.84□□□□□ -1.47
NPM1-207ENST00000521260 TMEM98Q9Y2Y6 226 aa5.84□□□□□ -1.47
NPM1-207ENST00000521260 TMED5Q9Y3A6 229 aa5.84□□□□□ -1.47
NPM1-207ENST00000521260 ATP6V0A2Q9Y487 856 aa5.84□□□□□ -1.47
NPM1-207ENST00000521260 MRFAP1Q9Y605 127 aa5.84□□□□□ -1.47
NPM1-207ENST00000521260 CFAP74Q9C0B2 1584 aa5.84□□□□□ -1.48
NPM1-207ENST00000521260 FAM135AQ9P2D6 1515 aa5.84□□□□□ -1.48
NPM1-207ENST00000521260 SNAPC4Q5SXM2 1469 aa5.83□□□□□ -1.48
NPM1-207ENST00000521260 TEX14Q8IWB6 1497 aa5.83□□□□□ -1.48
NPM1-207ENST00000521260 CADPSQ9ULU8 1353 aa5.83□□□□□ -1.48
NPM1-207ENST00000521260 CCDC162PA2VCL2 907 aa5.83□□□□□ -1.48
NPM1-207ENST00000521260 RASSF10A6NK89 507 aa5.83□□□□□ -1.48
NPM1-207ENST00000521260 TIMM44O43615 452 aa5.83□□□□□ -1.48
NPM1-207ENST00000521260 SMIM24O75264 130 aa5.83□□□□□ -1.48
NPM1-207ENST00000521260 VIMP08670 466 aaKnown RBP5.83□□□□□ -1.48
NPM1-207ENST00000521260 XBP1P17861 261 aa5.83□□□□□ -1.48
NPM1-207ENST00000521260 RHBDL3P58872 404 aa5.83□□□□□ -1.48
NPM1-207ENST00000521260 MCCD1P59942 119 aaPredicted RBP5.83□□□□□ -1.48
NPM1-207ENST00000521260 MRPS25P82663 173 aaKnown RBP5.83□□□□□ -1.48
NPM1-207ENST00000521260 HDLBPQ00341 1268 aaKnown RBP5.83□□□□□ -1.48
NPM1-207ENST00000521260 MAP7Q14244 749 aa5.83□□□□□ -1.48
NPM1-207ENST00000521260 MVPQ14764 893 aaKnown RBP5.83□□□□□ -1.48
NPM1-207ENST00000521260 SFMBT2Q5VUG0 894 aa5.83□□□□□ -1.48
NPM1-207ENST00000521260 TLDC1Q6P9B6 456 aa5.83□□□□□ -1.48
NPM1-207ENST00000521260 CWC27Q6UX04 472 aaKnown RBP5.83□□□□□ -1.48
NPM1-207ENST00000521260 TTLL7Q6ZT98 887 aa5.83□□□□□ -1.48
NPM1-207ENST00000521260 LRRN4Q8WUT4 740 aa5.83□□□□□ -1.48
NPM1-207ENST00000521260 GFM2Q969S9 779 aaKnown RBP5.83□□□□□ -1.48
NPM1-207ENST00000521260 XAGE2Q96GT9 111 aa5.83□□□□□ -1.48
NPM1-207ENST00000521260 GDAP1L1Q96MZ0 367 aa5.83□□□□□ -1.48
NPM1-207ENST00000521260 UCN2Q96RP3 112 aa5.83□□□□□ -1.48
NPM1-207ENST00000521260 SH3GL1Q99961 368 aa5.83□□□□□ -1.48
NPM1-207ENST00000521260 LRRCC1Q9C099 1032 aa5.83□□□□□ -1.48
NPM1-207ENST00000521260 VCPKMTQ9H867 229 aa5.83□□□□□ -1.48
NPM1-207ENST00000521260 DDX19AQ9NUU7 478 aaKnown RBP5.83□□□□□ -1.48
NPM1-207ENST00000521260 DKK3Q9UBP4 350 aa5.83□□□□□ -1.48
NPM1-207ENST00000521260 RABGEF1Q9UJ41 708 aa5.83□□□□□ -1.48
NPM1-207ENST00000521260 EXOC6BQ9Y2D4 811 aa5.83□□□□□ -1.48
NPM1-207ENST00000521260 AQRO60306 1485 aaKnown RBP eCLIP5.83□□□□□ -1.481e-10■■■■■ 32.1
NPM1-207ENST00000521260 GRIN2AQ12879 1464 aa5.83□□□□□ -1.48
NPM1-207ENST00000521260 RALGAPBQ86X10 1494 aa5.83□□□□□ -1.48
NPM1-207ENST00000521260 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.82□□□□□ -1.48
NPM1-207ENST00000521260 BICDL2A1A5D9 508 aa5.82□□□□□ -1.48
NPM1-207ENST00000521260 PALM3A6NDB9 673 aaPredicted RBP5.82□□□□□ -1.48
NPM1-207ENST00000521260 LRRIQ3A6PVS8 624 aaPredicted RBP5.82□□□□□ -1.48
NPM1-207ENST00000521260 BECN2A8MW95 431 aa5.82□□□□□ -1.48
NPM1-207ENST00000521260 B4DLN1 442 aa5.82□□□□□ -1.48
NPM1-207ENST00000521260 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.82□□□□□ -1.48
NPM1-207ENST00000521260 STXBP3O00186 592 aa5.82□□□□□ -1.48
NPM1-207ENST00000521260 ZBED4O75132 1171 aa5.82□□□□□ -1.48
NPM1-207ENST00000521260 CYP11B2P19099 503 aa5.82□□□□□ -1.48
NPM1-207ENST00000521260 SOX11P35716 441 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms