RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 MAGEB6Q8N7X4 407 aa25.13■■□□□ 1.61
TRIM35-203ENST00000521253 WRNIP1Q96S55 665 aa25.13■■□□□ 1.61
TRIM35-203ENST00000521253 ZNF341Q9BYN7 854 aa25.13■■□□□ 1.61
TRIM35-203ENST00000521253 BOLA2Q9H3K6 86 aa25.13■■□□□ 1.61
TRIM35-203ENST00000521253 DDTLA6NHG4 134 aaPredicted RBP25.12■■□□□ 1.61
TRIM35-203ENST00000521253 GOLIM4O00461 696 aa25.12■■□□□ 1.61
TRIM35-203ENST00000521253 ZBTB48P10074 688 aaPredicted RBP25.12■■□□□ 1.61
TRIM35-203ENST00000521253 GJA5P36382 358 aa25.12■■□□□ 1.61
TRIM35-203ENST00000521253 AAMPQ13685 434 aa25.12■■□□□ 1.61
TRIM35-203ENST00000521253 ZSCAN29Q8IWY8 852 aaPredicted RBP25.12■■□□□ 1.61
TRIM35-203ENST00000521253 CSADQ9Y600 493 aa25.12■■□□□ 1.61
TRIM35-203ENST00000521253 ATRNL1Q5VV63 1379 aa25.11■■□□□ 1.61
TRIM35-203ENST00000521253 PLCG2P16885 1265 aa25.11■■□□□ 1.61
TRIM35-203ENST00000521253 EXOC6Q8TAG9 804 aa25.11■■□□□ 1.61
TRIM35-203ENST00000521253 ZKSCAN4Q969J2 545 aaPredicted RBP25.11■■□□□ 1.61
TRIM35-203ENST00000521253 EDC3Q96F86 508 aaKnown RBP25.11■■□□□ 1.61
TRIM35-203ENST00000521253 PRDM10Q9NQV6 1147 aa25.11■■□□□ 1.61
TRIM35-203ENST00000521253 RNF186Q9NXI6 227 aa25.11■■□□□ 1.61
TRIM35-203ENST00000521253 OTOFQ9HC10 1997 aa25.11■■□□□ 1.61
TRIM35-203ENST00000521253 MYO5AQ9Y4I1 1855 aaKnown RBP25.11■■□□□ 1.61
TRIM35-203ENST00000521253 TM4SF4P48230 202 aa25.1■■□□□ 1.61
TRIM35-203ENST00000521253 CNKSR2Q8WXI2 1034 aa25.1■■□□□ 1.61
TRIM35-203ENST00000521253 OPTNQ96CV9 577 aa25.1■■□□□ 1.61
TRIM35-203ENST00000521253 HAUS7Q99871 368 aa25.1■■□□□ 1.61
TRIM35-203ENST00000521253 SAGE1Q9NXZ1 904 aa25.1■■□□□ 1.61
TRIM35-203ENST00000521253 SNCAIPQ9Y6H5 919 aa25.1■■□□□ 1.61
TRIM35-203ENST00000521253 TRPA1O75762 1119 aa25.09■■□□□ 1.61
TRIM35-203ENST00000521253 INPP5BP32019 993 aa25.09■■□□□ 1.61
TRIM35-203ENST00000521253 DYNLL1P63167 89 aaKnown RBP25.09■■□□□ 1.61
TRIM35-203ENST00000521253 SREBF2Q12772 1141 aa25.09■■□□□ 1.61
TRIM35-203ENST00000521253 HDAC1Q13547 482 aaPredicted RBP25.09■■□□□ 1.61
TRIM35-203ENST00000521253 TMED8Q6PL24 325 aaPredicted RBP25.09■■□□□ 1.61
TRIM35-203ENST00000521253 MIGA1Q8NAN2 632 aa25.09■■□□□ 1.61
TRIM35-203ENST00000521253 OSBPL5Q9H0X9 879 aaPredicted RBP25.09■■□□□ 1.61
TRIM35-203ENST00000521253 ECHDC1Q9NTX5 307 aa25.09■■□□□ 1.61
TRIM35-203ENST00000521253 PAG1Q9NWQ8 432 aa25.09■■□□□ 1.61
TRIM35-203ENST00000521253 ZNF112Q9UJU3 913 aa25.09■■□□□ 1.61
TRIM35-203ENST00000521253 MANSC4A6NHS7 340 aaPredicted RBP25.07■■□□□ 1.6
TRIM35-203ENST00000521253 SLURP2P0DP57 97 aa25.07■■□□□ 1.6
TRIM35-203ENST00000521253 PDE6AP16499 860 aa25.07■■□□□ 1.6
TRIM35-203ENST00000521253 SLC9C2Q5TAH2 1124 aa25.07■■□□□ 1.6
TRIM35-203ENST00000521253 TGFBRAP1Q8WUH2 860 aa25.07■■□□□ 1.6
TRIM35-203ENST00000521253 DOCK2Q92608 1830 aa25.07■■□□□ 1.6
TRIM35-203ENST00000521253 SPDYE5A6NIY4 337 aa25.06■■□□□ 1.6
TRIM35-203ENST00000521253 MAP3K10Q02779 954 aa25.06■■□□□ 1.6
TRIM35-203ENST00000521253 TSHZ3Q63HK5 1081 aa25.06■■□□□ 1.6
TRIM35-203ENST00000521253 OTUD5Q96G74 571 aa25.06■■□□□ 1.6
TRIM35-203ENST00000521253 GPATCH3Q96I76 525 aa25.06■■□□□ 1.6
TRIM35-203ENST00000521253 COL2A1P02458 1487 aaPredicted RBP25.05■■□□□ 1.6
TRIM35-203ENST00000521253 MAPKAPK5Q8IW41 473 aa25.05■■□□□ 1.6
TRIM35-203ENST00000521253 AK9Q5TCS8 1911 aa25.05■■□□□ 1.6
TRIM35-203ENST00000521253 FLT1P17948 1338 aa25.05■■□□□ 1.6
TRIM35-203ENST00000521253 PHF20L1A8MW92 1017 aa25.04■■□□□ 1.6
TRIM35-203ENST00000521253 INHBEP58166 350 aa25.04■■□□□ 1.6
TRIM35-203ENST00000521253 ERO1BQ86YB8 467 aa25.04■■□□□ 1.6
TRIM35-203ENST00000521253 CERS3Q8IU89 383 aa25.04■■□□□ 1.6
TRIM35-203ENST00000521253 GCC1Q96CN9 775 aa25.04■■□□□ 1.6
TRIM35-203ENST00000521253 ZNF532Q9HCE3 1301 aa25.04■■□□□ 1.6
TRIM35-203ENST00000521253 TCRBV5S4A2TA0A5A2 114 aa25.03■■□□□ 1.6
TRIM35-203ENST00000521253 NOL9Q5SY16 702 aaKnown RBP25.03■■□□□ 1.6
TRIM35-203ENST00000521253 OTUD7AQ8TE49 926 aaPredicted RBP25.03■■□□□ 1.6
TRIM35-203ENST00000521253 MS4A4AQ96JQ5 239 aa25.03■■□□□ 1.6
TRIM35-203ENST00000521253 TBC1D12O60347 775 aa25.02■■□□□ 1.6
TRIM35-203ENST00000521253 IFFO2Q5TF58 517 aa25.02■■□□□ 1.6
TRIM35-203ENST00000521253 ANKRD45Q5TZF3 282 aa25.02■■□□□ 1.6
TRIM35-203ENST00000521253 IFNL1Q8IU54 200 aa25.02■■□□□ 1.6
TRIM35-203ENST00000521253 RIOK1Q9BRS2 568 aaKnown RBP25.02■■□□□ 1.6
TRIM35-203ENST00000521253 MAGEB6P1A0A0J9YX57 407 aa25.01■■□□□ 1.59
TRIM35-203ENST00000521253 TESPA1A2RU30 521 aaPredicted RBP25.01■■□□□ 1.59
TRIM35-203ENST00000521253 FAM196BA6NMK8 535 aa25.01■■□□□ 1.59
TRIM35-203ENST00000521253 IGF2BP3O00425 579 aaKnown RBP eCLIP25.01■■□□□ 1.59
TRIM35-203ENST00000521253 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.01■■□□□ 1.59
TRIM35-203ENST00000521253 DHX36Q9H2U1 1008 aaKnown RBP25.01■■□□□ 1.59
TRIM35-203ENST00000521253 IRF6O14896 467 aa25■■□□□ 1.59
TRIM35-203ENST00000521253 ADD2P35612 726 aa25■■□□□ 1.59
TRIM35-203ENST00000521253 USP5P45974 858 aa25■■□□□ 1.59
TRIM35-203ENST00000521253 GTF2A2P52657 109 aa25■■□□□ 1.59
TRIM35-203ENST00000521253 PPATQ06203 517 aa25■■□□□ 1.59
TRIM35-203ENST00000521253 PPIL2Q13356 520 aa25■■□□□ 1.59
TRIM35-203ENST00000521253 SLFNL1Q499Z3 407 aa25■■□□□ 1.59
TRIM35-203ENST00000521253 PTPN18Q99952 460 aa25■■□□□ 1.59
TRIM35-203ENST00000521253 RWDD1Q9H446 243 aaPredicted RBP25■■□□□ 1.59
TRIM35-203ENST00000521253 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25■■□□□ 1.59
TRIM35-203ENST00000521253 ZBTB47Q9UFB7 747 aaPredicted RBP25■■□□□ 1.59
TRIM35-203ENST00000521253 TTC41PQ6P2S7 1318 aa25■■□□□ 1.59
TRIM35-203ENST00000521253 TBC1D8O95759 1140 aa24.99■■□□□ 1.59
TRIM35-203ENST00000521253 IRX6P78412 446 aaPredicted RBP24.99■■□□□ 1.59
TRIM35-203ENST00000521253 SCYL3Q8IZE3 742 aa24.99■■□□□ 1.59
TRIM35-203ENST00000521253 BRI3BPQ8WY22 251 aa24.99■■□□□ 1.59
TRIM35-203ENST00000521253 PI4KBQ9UBF8 816 aa24.99■■□□□ 1.59
TRIM35-203ENST00000521253 SAP30BPQ9UHR5 308 aaKnown RBP24.99■■□□□ 1.59
TRIM35-203ENST00000521253 PALD1Q9ULE6 856 aa24.99■■□□□ 1.59
TRIM35-203ENST00000521253 CCL15-CCL14A0A0B4J2E2 113 aa24.98■■□□□ 1.59
TRIM35-203ENST00000521253 ALDH1A1P00352 501 aa24.98■■□□□ 1.59
TRIM35-203ENST00000521253 IGHDP01880 384 aa24.98■■□□□ 1.59
TRIM35-203ENST00000521253 CHGBP05060 677 aa24.98■■□□□ 1.59
TRIM35-203ENST00000521253 CCL15Q16663 113 aa24.98■■□□□ 1.59
TRIM35-203ENST00000521253 TNS4Q8IZW8 715 aa24.98■■□□□ 1.59
TRIM35-203ENST00000521253 SALL3Q9BXA9 1300 aa24.97■■□□□ 1.59
TRIM35-203ENST00000521253 CTNND1O60716 968 aaKnown RBP24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms