RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 TLL2Q9Y6L7 1015 aa14.33□□□□□ -0.12
HPS4-218ENST00000519774 RPAP1Q9BWH6 1393 aaPredicted RBP14.33□□□□□ -0.12
HPS4-218ENST00000519774 FOCADQ5VW36 1801 aa14.32□□□□□ -0.12
HPS4-218ENST00000519774 MAGEB6P1A0A0J9YX57 407 aa14.32□□□□□ -0.12
HPS4-218ENST00000519774 CHGBP05060 677 aa14.32□□□□□ -0.12
HPS4-218ENST00000519774 PDE4AP27815 886 aa14.32□□□□□ -0.12
HPS4-218ENST00000519774 PPP4CP60510 307 aa14.32□□□□□ -0.12
HPS4-218ENST00000519774 GRM1Q13255 1194 aa14.32□□□□□ -0.12
HPS4-218ENST00000519774 TMED8Q6PL24 325 aaPredicted RBP14.32□□□□□ -0.12
HPS4-218ENST00000519774 CENPQQ7L2Z9 268 aaPredicted RBP14.32□□□□□ -0.12
HPS4-218ENST00000519774 SAPCD2Q86UD0 394 aa14.32□□□□□ -0.12
HPS4-218ENST00000519774 ZSCAN29Q8IWY8 852 aaPredicted RBP14.32□□□□□ -0.12
HPS4-218ENST00000519774 ZFPM1Q8IX07 1006 aa14.32□□□□□ -0.12
HPS4-218ENST00000519774 TCRBV5S4A2TA0A5A2 114 aa14.31□□□□□ -0.12
HPS4-218ENST00000519774 ENTPD3O75355 529 aa14.31□□□□□ -0.12
HPS4-218ENST00000519774 FKBP1BP68106 108 aa14.31□□□□□ -0.12
HPS4-218ENST00000519774 MAPKAPK5Q8IW41 473 aa14.31□□□□□ -0.12
HPS4-218ENST00000519774 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.31□□□□□ -0.12
HPS4-218ENST00000519774 ANGEL1Q9UNK9 670 aaKnown RBP14.31□□□□□ -0.12
HPS4-218ENST00000519774 NAV1Q8NEY1 1877 aa14.3□□□□□ -0.12
HPS4-218ENST00000519774 RASSF10A6NK89 507 aa14.3□□□□□ -0.12
HPS4-218ENST00000519774 TRIM6-TRIM34B2RNG4 842 aa14.3□□□□□ -0.12
HPS4-218ENST00000519774 UBE2Q2LH0YL09 131 aa14.3□□□□□ -0.12
HPS4-218ENST00000519774 PPP1R12BO60237 982 aaPredicted RBP14.3□□□□□ -0.12
HPS4-218ENST00000519774 MBD4O95243 580 aa14.3□□□□□ -0.12
HPS4-218ENST00000519774 UBE3CQ15386 1083 aa14.3□□□□□ -0.12
HPS4-218ENST00000519774 DEFB115Q30KQ5 88 aa14.3□□□□□ -0.12
HPS4-218ENST00000519774 ARMC9Q7Z3E5 817 aa14.3□□□□□ -0.12
HPS4-218ENST00000519774 CERS3Q8IU89 383 aa14.3□□□□□ -0.12
HPS4-218ENST00000519774 TGFBRAP1Q8WUH2 860 aa14.3□□□□□ -0.12
HPS4-218ENST00000519774 RIOK1Q9BRS2 568 aaKnown RBP14.3□□□□□ -0.12
HPS4-218ENST00000519774 ARMT1Q9H993 441 aa14.3□□□□□ -0.12
HPS4-218ENST00000519774 OTOFQ9HC10 1997 aa14.3□□□□□ -0.12
HPS4-218ENST00000519774 RNF113AO15541 343 aaKnown RBP14.29□□□□□ -0.12
HPS4-218ENST00000519774 USP5P45974 858 aa14.29□□□□□ -0.12
HPS4-218ENST00000519774 LRRFIP1Q32MZ4 808 aaKnown RBP14.29□□□□□ -0.12
HPS4-218ENST00000519774 LCORLQ8N3X6 602 aa14.29□□□□□ -0.12
HPS4-218ENST00000519774 RILPL2Q969X0 211 aa14.29□□□□□ -0.12
HPS4-218ENST00000519774 EVI5LQ96CN4 794 aa14.29□□□□□ -0.12
HPS4-218ENST00000519774 CSRNP1Q96S65 589 aa14.29□□□□□ -0.12
HPS4-218ENST00000519774 CRNKL1Q9BZJ0 848 aaKnown RBP14.29□□□□□ -0.12
HPS4-218ENST00000519774 OSBPL5Q9H0X9 879 aaPredicted RBP14.29□□□□□ -0.12
HPS4-218ENST00000519774 OSBPL3Q9H4L5 887 aa14.29□□□□□ -0.12
HPS4-218ENST00000519774 FLT1P17948 1338 aa14.29□□□□□ -0.12
HPS4-218ENST00000519774 MYH1P12882 1939 aa14.29□□□□□ -0.12
HPS4-218ENST00000519774 DDTLA6NHG4 134 aaPredicted RBP14.28□□□□□ -0.12
HPS4-218ENST00000519774 COL2A1P02458 1487 aaPredicted RBP14.28□□□□□ -0.12
HPS4-218ENST00000519774 ZFYP08048 801 aaPredicted RBP14.28□□□□□ -0.12
HPS4-218ENST00000519774 IREB2P48200 963 aaKnown RBP14.28□□□□□ -0.12
HPS4-218ENST00000519774 SLC4A8Q2Y0W8 1093 aa14.28□□□□□ -0.12
HPS4-218ENST00000519774 DCAF15Q66K64 600 aa14.28□□□□□ -0.12
HPS4-218ENST00000519774 CYP4F22Q6NT55 531 aa14.28□□□□□ -0.12
HPS4-218ENST00000519774 MIGA2Q7L4E1 593 aa14.28□□□□□ -0.12
HPS4-218ENST00000519774 SH3BP5LQ7L8J4 393 aa14.28□□□□□ -0.12
HPS4-218ENST00000519774 APPBP2Q92624 585 aa14.28□□□□□ -0.12
HPS4-218ENST00000519774 AIDAQ96BJ3 306 aa14.28□□□□□ -0.12
HPS4-218ENST00000519774 KLRG1Q96E93 195 aa14.28□□□□□ -0.12
HPS4-218ENST00000519774 HOOK2Q96ED9 719 aa14.28□□□□□ -0.12
HPS4-218ENST00000519774 PUS7LQ9H0K6 701 aaKnown RBP14.28□□□□□ -0.12
HPS4-218ENST00000519774 SAP30BPQ9UHR5 308 aaKnown RBP14.28□□□□□ -0.12
HPS4-218ENST00000519774 ATRNL1Q5VV63 1379 aa14.27□□□□□ -0.12
HPS4-218ENST00000519774 USP2O75604 605 aaPredicted RBP14.27□□□□□ -0.13
HPS4-218ENST00000519774 RGMBQ6NW40 437 aa14.27□□□□□ -0.13
HPS4-218ENST00000519774 CAPNS2Q96L46 248 aa14.27□□□□□ -0.13
HPS4-218ENST00000519774 DDX60LQ5H9U9 1706 aaKnown RBP14.27□□□□□ -0.13
HPS4-218ENST00000519774 M0R2C6 588 aa14.26□□□□□ -0.13
HPS4-218ENST00000519774 PRKAB2O43741 272 aa14.26□□□□□ -0.13
HPS4-218ENST00000519774 ECE1P42892 770 aa14.26□□□□□ -0.13
HPS4-218ENST00000519774 VEGFBP49765 207 aa14.26□□□□□ -0.13
HPS4-218ENST00000519774 ZNF157P51786 506 aaPredicted RBP14.26□□□□□ -0.13
HPS4-218ENST00000519774 MAP3K11Q16584 847 aa14.26□□□□□ -0.13
HPS4-218ENST00000519774 TTC22Q5TAA0 569 aa14.26□□□□□ -0.13
HPS4-218ENST00000519774 ERICH6BQ5W0A0 696 aa14.26□□□□□ -0.13
HPS4-218ENST00000519774 SKAP1Q86WV1 359 aa14.26□□□□□ -0.13
HPS4-218ENST00000519774 DNAJC5GQ8N7S2 189 aa14.26□□□□□ -0.13
HPS4-218ENST00000519774 SDR42E1Q8WUS8 393 aa14.26□□□□□ -0.13
HPS4-218ENST00000519774 OSBP2Q969R2 916 aa14.26□□□□□ -0.13
HPS4-218ENST00000519774 HHIPL1Q96JK4 782 aa14.26□□□□□ -0.13
HPS4-218ENST00000519774 ZNF341Q9BYN7 854 aa14.26□□□□□ -0.13
HPS4-218ENST00000519774 PPP4R2Q9NY27 417 aa14.26□□□□□ -0.13
HPS4-218ENST00000519774 PALD1Q9ULE6 856 aa14.26□□□□□ -0.13
HPS4-218ENST00000519774 SIPA1L1O43166 1804 aa14.26□□□□□ -0.13
HPS4-218ENST00000519774 WDR33Q9C0J8 1336 aaKnown RBP14.25□□□□□ -0.13
HPS4-218ENST00000519774 FAM196BA6NMK8 535 aa14.25□□□□□ -0.13
HPS4-218ENST00000519774 SLURP2P0DP57 97 aa14.25□□□□□ -0.13
HPS4-218ENST00000519774 ZMYM1Q5SVZ6 1142 aa14.25□□□□□ -0.13
HPS4-218ENST00000519774 LDLRAD1Q5T700 205 aa14.25□□□□□ -0.13
HPS4-218ENST00000519774 CLMNQ96JQ2 1002 aa14.25□□□□□ -0.13
HPS4-218ENST00000519774 WRNIP1Q96S55 665 aa14.25□□□□□ -0.13
HPS4-218ENST00000519774 SLC4A4Q9Y6R1 1079 aa14.25□□□□□ -0.13
HPS4-218ENST00000519774 BAZ2AQ9UIF9 1905 aaKnown RBP14.25□□□□□ -0.13
HPS4-218ENST00000519774 GPAA1O43292 621 aa14.24□□□□□ -0.13
HPS4-218ENST00000519774 AOC2O75106 756 aa14.24□□□□□ -0.13
HPS4-218ENST00000519774 HLA-DOAP06340 250 aa14.24□□□□□ -0.13
HPS4-218ENST00000519774 GSPT1P15170 499 aaKnown RBP14.24□□□□□ -0.13
HPS4-218ENST00000519774 MAP3K9P80192 1104 aa14.24□□□□□ -0.13
HPS4-218ENST00000519774 RASAL3Q86YV0 1011 aa14.24□□□□□ -0.13
HPS4-218ENST00000519774 ANKRD13AQ8IZ07 590 aa14.24□□□□□ -0.13
HPS4-218ENST00000519774 SEC62Q99442 399 aaKnown RBP14.24□□□□□ -0.13
HPS4-218ENST00000519774 TRIM34Q9BYJ4 488 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms