RNA–Protein interactions for RNA: ENST00000519599.1

IGKV3D-25-201, Transcript of immunoglobulin kappa variable 3D-25 (pseudogene), humanhuman

BASIC

Gene IGKV3D-25, Length 235 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-25-201ENST00000519599 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.62□□□□□ -1.19
IGKV3D-25-201ENST00000519599 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.62□□□□□ -1.19
IGKV3D-25-201ENST00000519599 KCNH4Q9UQ05 1017 aa7.62□□□□□ -1.19
IGKV3D-25-201ENST00000519599 CCL15-CCL14A0A0B4J2E2 113 aa7.61□□□□□ -1.19
IGKV3D-25-201ENST00000519599 BTBD19C9JJ37 291 aa7.61□□□□□ -1.19
IGKV3D-25-201ENST00000519599 ALDH1A1P00352 501 aa7.61□□□□□ -1.19
IGKV3D-25-201ENST00000519599 CYP2E1P05181 493 aaPredicted RBP7.61□□□□□ -1.19
IGKV3D-25-201ENST00000519599 BTDP43251 543 aa7.61□□□□□ -1.19
IGKV3D-25-201ENST00000519599 PPIL2Q13356 520 aa7.61□□□□□ -1.19
IGKV3D-25-201ENST00000519599 CCL15Q16663 113 aa7.61□□□□□ -1.19
IGKV3D-25-201ENST00000519599 TNNI3KQ59H18 835 aa7.61□□□□□ -1.19
IGKV3D-25-201ENST00000519599 GPAT2Q6NUI2 795 aa7.61□□□□□ -1.19
IGKV3D-25-201ENST00000519599 CEP85Q6P2H3 762 aa7.61□□□□□ -1.19
IGKV3D-25-201ENST00000519599 FBXO46Q6PJ61 603 aaPredicted RBP7.61□□□□□ -1.19
IGKV3D-25-201ENST00000519599 ERO1BQ86YB8 467 aa7.61□□□□□ -1.19
IGKV3D-25-201ENST00000519599 SIRT2Q8IXJ6 389 aa7.61□□□□□ -1.19
IGKV3D-25-201ENST00000519599 SPATA5Q8NB90 893 aa7.61□□□□□ -1.19
IGKV3D-25-201ENST00000519599 EAF2Q96CJ1 260 aaPredicted RBP7.61□□□□□ -1.19
IGKV3D-25-201ENST00000519599 ZNF341Q9BYN7 854 aa7.61□□□□□ -1.19
IGKV3D-25-201ENST00000519599 USP40Q9NVE5 1235 aa7.61□□□□□ -1.19
IGKV3D-25-201ENST00000519599 DBNLQ9UJU6 430 aaKnown RBP7.61□□□□□ -1.19
IGKV3D-25-201ENST00000519599 FPGT-TNNI3KV9GXZ4 949 aa7.61□□□□□ -1.19
IGKV3D-25-201ENST00000519599 FRMPD3Q5JV73 1810 aa7.6□□□□□ -1.19
IGKV3D-25-201ENST00000519599 FAM196BA6NMK8 535 aa7.6□□□□□ -1.19
IGKV3D-25-201ENST00000519599 ENTPD3O75355 529 aa7.6□□□□□ -1.19
IGKV3D-25-201ENST00000519599 NPM3O75607 178 aaKnown RBP7.6□□□□□ -1.19
IGKV3D-25-201ENST00000519599 JAG1P78504 1218 aa7.6□□□□□ -1.19
IGKV3D-25-201ENST00000519599 PPATQ06203 517 aa7.6□□□□□ -1.19
IGKV3D-25-201ENST00000519599 MVPQ14764 893 aaKnown RBP7.6□□□□□ -1.19
IGKV3D-25-201ENST00000519599 PKN2Q16513 984 aaKnown RBP7.6□□□□□ -1.19
IGKV3D-25-201ENST00000519599 CCDC84Q86UT8 332 aaPredicted RBP7.6□□□□□ -1.19
IGKV3D-25-201ENST00000519599 ZNF512BQ96KM6 892 aaPredicted RBP7.6□□□□□ -1.19
IGKV3D-25-201ENST00000519599 ARHGAP39Q9C0H5 1083 aa7.6□□□□□ -1.19
IGKV3D-25-201ENST00000519599 DNAJC18Q9H819 358 aa7.6□□□□□ -1.19
IGKV3D-25-201ENST00000519599 GNL3LQ9NVN8 582 aaKnown RBP7.6□□□□□ -1.19
IGKV3D-25-201ENST00000519599 ABCF2Q9UG63 623 aa7.6□□□□□ -1.19
IGKV3D-25-201ENST00000519599 HDAC5Q9UQL6 1122 aa7.6□□□□□ -1.19
IGKV3D-25-201ENST00000519599 AKAP2Q9Y2D5 859 aa7.6□□□□□ -1.19
IGKV3D-25-201ENST00000519599 GREB1LQ9C091 1923 aaPredicted RBP7.59□□□□□ -1.19
IGKV3D-25-201ENST00000519599 POTEFA5A3E0 1075 aa7.59□□□□□ -1.19
IGKV3D-25-201ENST00000519599 GTF2A2P52657 109 aa7.59□□□□□ -1.19
IGKV3D-25-201ENST00000519599 MLLT1Q03111 559 aaPredicted RBP7.59□□□□□ -1.19
IGKV3D-25-201ENST00000519599 SHROOM1Q2M3G4 852 aaPredicted RBP7.59□□□□□ -1.19
IGKV3D-25-201ENST00000519599 DCAF15Q66K64 600 aa7.59□□□□□ -1.19
IGKV3D-25-201ENST00000519599 C17orf99Q6UX52 265 aa7.59□□□□□ -1.19
IGKV3D-25-201ENST00000519599 ZGPATQ8N5A5 531 aaKnown RBP7.59□□□□□ -1.19
IGKV3D-25-201ENST00000519599 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.59□□□□□ -1.19
IGKV3D-25-201ENST00000519599 NEUROD6Q96NK8 337 aa7.59□□□□□ -1.19
IGKV3D-25-201ENST00000519599 PIH1D3Q9NQM4 214 aaKnown RBP7.59□□□□□ -1.19
IGKV3D-25-201ENST00000519599 SNRKQ9NRH2 765 aa7.59□□□□□ -1.19
IGKV3D-25-201ENST00000519599 TMOD2Q9NZR1 351 aa7.59□□□□□ -1.19
IGKV3D-25-201ENST00000519599 PTPN22Q9Y2R2 807 aa7.59□□□□□ -1.19
IGKV3D-25-201ENST00000519599 TRIM17Q9Y577 477 aa7.59□□□□□ -1.19
IGKV3D-25-201ENST00000519599 CSADQ9Y600 493 aa7.59□□□□□ -1.19
IGKV3D-25-201ENST00000519599 NDUFB9Q9Y6M9 179 aa7.59□□□□□ -1.19
IGKV3D-25-201ENST00000519599 TBC1D12O60347 775 aa7.58□□□□□ -1.2
IGKV3D-25-201ENST00000519599 TLR2O60603 784 aa7.58□□□□□ -1.2
IGKV3D-25-201ENST00000519599 SURF6O75683 361 aaKnown RBP7.58□□□□□ -1.2
IGKV3D-25-201ENST00000519599 BCRP11274 1271 aa7.58□□□□□ -1.2
IGKV3D-25-201ENST00000519599 PTPRAP18433 802 aa7.58□□□□□ -1.2
IGKV3D-25-201ENST00000519599 ZAP70P43403 619 aa7.58□□□□□ -1.2
IGKV3D-25-201ENST00000519599 PPP4CP60510 307 aa7.58□□□□□ -1.2
IGKV3D-25-201ENST00000519599 SP3Q02447 781 aa7.58□□□□□ -1.2
IGKV3D-25-201ENST00000519599 G3BP1Q13283 466 aaKnown RBP eCLIP7.58□□□□□ -1.2
IGKV3D-25-201ENST00000519599 TAF1CQ15572 869 aaPredicted RBP7.58□□□□□ -1.2
IGKV3D-25-201ENST00000519599 C20orf194Q5TEA3 1177 aa7.58□□□□□ -1.2
IGKV3D-25-201ENST00000519599 ERICH6Q7L0X2 663 aa7.58□□□□□ -1.2
IGKV3D-25-201ENST00000519599 METTL16Q86W50 562 aaKnown RBP7.58□□□□□ -1.2
IGKV3D-25-201ENST00000519599 DZIP1Q86YF9 867 aaKnown RBP7.58□□□□□ -1.2
IGKV3D-25-201ENST00000519599 ITPRIPQ8IWB1 547 aa7.58□□□□□ -1.2
IGKV3D-25-201ENST00000519599 SCYL3Q8IZE3 742 aa7.58□□□□□ -1.2
IGKV3D-25-201ENST00000519599 SH3RF3Q8TEJ3 882 aaPredicted RBP7.58□□□□□ -1.2
IGKV3D-25-201ENST00000519599 ARMC5Q96C12 935 aa7.58□□□□□ -1.2
IGKV3D-25-201ENST00000519599 OSBPL5Q9H0X9 879 aaPredicted RBP7.58□□□□□ -1.2
IGKV3D-25-201ENST00000519599 ANTXR1Q9H6X2 564 aa7.58□□□□□ -1.2
IGKV3D-25-201ENST00000519599 ZCCHC17Q9NP64 241 aaKnown RBP7.58□□□□□ -1.2
IGKV3D-25-201ENST00000519599 ZBTB40Q9NUA8 1239 aa7.58□□□□□ -1.2
IGKV3D-25-201ENST00000519599 AFG3L2Q9Y4W6 797 aa7.58□□□□□ -1.2
IGKV3D-25-201ENST00000519599 A0A0G2JMZ2 1700 aa7.58□□□□□ -1.2
IGKV3D-25-201ENST00000519599 COL11A1P12107 1806 aaPredicted RBP7.57□□□□□ -1.2
IGKV3D-25-201ENST00000519599 ZNFX1Q9P2E3 1918 aaKnown RBP7.57□□□□□ -1.2
IGKV3D-25-201ENST00000519599 A0A0G2JLL6 359 aaPredicted RBP7.57□□□□□ -1.2
IGKV3D-25-201ENST00000519599 UQCRFS1P1P0C7P4 283 aa7.57□□□□□ -1.2
IGKV3D-25-201ENST00000519599 CETPP11597 493 aa7.57□□□□□ -1.2
IGKV3D-25-201ENST00000519599 SNAPC2Q13487 334 aa7.57□□□□□ -1.2
IGKV3D-25-201ENST00000519599 PICALMQ13492 652 aa7.57□□□□□ -1.2
IGKV3D-25-201ENST00000519599 PRRT2Q7Z6L0 340 aaPredicted RBP7.57□□□□□ -1.2
IGKV3D-25-201ENST00000519599 ANKRD23Q86SG2 305 aa7.57□□□□□ -1.2
IGKV3D-25-201ENST00000519599 ERO1AQ96HE7 468 aa7.57□□□□□ -1.2
IGKV3D-25-201ENST00000519599 CCDC8Q9H0W5 538 aaPredicted RBP7.57□□□□□ -1.2
IGKV3D-25-201ENST00000519599 EXOC6BQ9Y2D4 811 aa7.57□□□□□ -1.2
IGKV3D-25-201ENST00000519599 PTCH2Q9Y6C5 1203 aa7.57□□□□□ -1.2
IGKV3D-25-201ENST00000519599 CXCL11O14625 94 aa7.56□□□□□ -1.2
IGKV3D-25-201ENST00000519599 CYP2C8P10632 490 aa7.56□□□□□ -1.2
IGKV3D-25-201ENST00000519599 DYNLL1P63167 89 aaKnown RBP7.56□□□□□ -1.2
IGKV3D-25-201ENST00000519599 LACTBP83111 547 aaPredicted RBP7.56□□□□□ -1.2
IGKV3D-25-201ENST00000519599 EVX2Q03828 476 aa7.56□□□□□ -1.2
IGKV3D-25-201ENST00000519599 SPTY2D1Q68D10 685 aaPredicted RBP7.56□□□□□ -1.2
IGKV3D-25-201ENST00000519599 OTUD7BQ6GQQ9 843 aa7.56□□□□□ -1.2
IGKV3D-25-201ENST00000519599 POTEEQ6S8J3 1075 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms