RNA–Protein interactions for RNA: ENST00000519386.5

MRPS28-205, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-205ENST00000519386 MCMDC2Q4G0Z9 681 aa8.63□□□□□ -1.03
MRPS28-205ENST00000519386 CAVIN4Q5BKX8 364 aa8.63□□□□□ -1.03
MRPS28-205ENST00000519386 ZMYM1Q5SVZ6 1142 aa8.63□□□□□ -1.03
MRPS28-205ENST00000519386 USP17L1Q7RTZ2 530 aa8.63□□□□□ -1.03
MRPS28-205ENST00000519386 VPS37DQ86XT2 251 aa8.63□□□□□ -1.03
MRPS28-205ENST00000519386 TDRD7Q8NHU6 1098 aaKnown RBP8.63□□□□□ -1.03
MRPS28-205ENST00000519386 INTS4Q96HW7 963 aaKnown RBP8.63□□□□□ -1.03
MRPS28-205ENST00000519386 DNAJC2Q99543 621 aaKnown RBP8.63□□□□□ -1.03
MRPS28-205ENST00000519386 DSCC1Q9BVC3 393 aa8.63□□□□□ -1.03
MRPS28-205ENST00000519386 MXD3Q9BW11 206 aa8.63□□□□□ -1.03
MRPS28-205ENST00000519386 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.63□□□□□ -1.03
MRPS28-205ENST00000519386 RRAGCQ9HB90 399 aa8.63□□□□□ -1.03
MRPS28-205ENST00000519386 CWC22Q9HCG8 908 aaKnown RBP8.63□□□□□ -1.03
MRPS28-205ENST00000519386 JAG2Q9Y219 1238 aa8.63□□□□□ -1.03
MRPS28-205ENST00000519386 SCN4AP35499 1836 aa8.63□□□□□ -1.03
MRPS28-205ENST00000519386 ZMYM6O95789 1325 aa8.62□□□□□ -1.03
MRPS28-205ENST00000519386 SHTN1A0MZ66 631 aa8.62□□□□□ -1.03
MRPS28-205ENST00000519386 RNF113AO15541 343 aaKnown RBP8.62□□□□□ -1.03
MRPS28-205ENST00000519386 CD2BP2O95400 341 aaKnown RBP8.62□□□□□ -1.03
MRPS28-205ENST00000519386 HSP90AA1P07900 732 aaKnown RBP8.62□□□□□ -1.03
MRPS28-205ENST00000519386 PSMA5P28066 241 aa8.62□□□□□ -1.03
MRPS28-205ENST00000519386 EPS15P42566 896 aa8.62□□□□□ -1.03
MRPS28-205ENST00000519386 SCNN1DP51172 638 aa8.62□□□□□ -1.03
MRPS28-205ENST00000519386 NEK4P51957 841 aa8.62□□□□□ -1.03
MRPS28-205ENST00000519386 CHAF1AQ13111 956 aaPredicted RBP8.62□□□□□ -1.03
MRPS28-205ENST00000519386 DACT2Q5SW24 774 aa8.62□□□□□ -1.03
MRPS28-205ENST00000519386 POTEEQ6S8J3 1075 aa8.62□□□□□ -1.03
MRPS28-205ENST00000519386 FAM227BQ96M60 508 aa8.62□□□□□ -1.03
MRPS28-205ENST00000519386 ALDH8A1Q9H2A2 487 aaPredicted RBP8.62□□□□□ -1.03
MRPS28-205ENST00000519386 GPRC5DQ9NZD1 345 aa8.62□□□□□ -1.03
MRPS28-205ENST00000519386 PALD1Q9ULE6 856 aa8.62□□□□□ -1.03
MRPS28-205ENST00000519386 RBM8AQ9Y5S9 174 aaKnown RBP8.62□□□□□ -1.03
MRPS28-205ENST00000519386 SNX14Q9Y5W7 946 aa8.62□□□□□ -1.03
MRPS28-205ENST00000519386 FAM205AQ6ZU69 1335 aa8.61□□□□□ -1.03
MRPS28-205ENST00000519386 MYH15Q9Y2K3 1946 aa8.61□□□□□ -1.03
MRPS28-205ENST00000519386 GOLIM4O00461 696 aa8.61□□□□□ -1.03
MRPS28-205ENST00000519386 SEMA3EO15041 775 aa8.61□□□□□ -1.03
MRPS28-205ENST00000519386 EVI5O60447 810 aa8.61□□□□□ -1.03
MRPS28-205ENST00000519386 FRAT2O75474 233 aaPredicted RBP8.61□□□□□ -1.03
MRPS28-205ENST00000519386 PDIA4P13667 645 aaKnown RBP8.61□□□□□ -1.03
MRPS28-205ENST00000519386 VEGFAP15692 232 aaPredicted RBP8.61□□□□□ -1.03
MRPS28-205ENST00000519386 RPS12P25398 132 aaKnown RBP8.61□□□□□ -1.03
MRPS28-205ENST00000519386 LMOD1P29536 600 aaPredicted RBP8.61□□□□□ -1.03
MRPS28-205ENST00000519386 MAP3K9P80192 1104 aa8.61□□□□□ -1.03
MRPS28-205ENST00000519386 CUL4AQ13619 759 aa8.61□□□□□ -1.03
MRPS28-205ENST00000519386 VPS53Q5VIR6 699 aa8.61□□□□□ -1.03
MRPS28-205ENST00000519386 STRIP1Q5VSL9 837 aa8.61□□□□□ -1.03
MRPS28-205ENST00000519386 CCDC102BQ68D86 513 aa8.61□□□□□ -1.03
MRPS28-205ENST00000519386 TTLL5Q6EMB2 1281 aa8.61□□□□□ -1.03
MRPS28-205ENST00000519386 RSBN1LQ6PCB5 846 aaPredicted RBP8.61□□□□□ -1.03
MRPS28-205ENST00000519386 CLEC17AQ6ZS10 378 aa8.61□□□□□ -1.03
MRPS28-205ENST00000519386 SPNS2Q8IVW8 549 aa8.61□□□□□ -1.03
MRPS28-205ENST00000519386 CERS5Q8N5B7 392 aa8.61□□□□□ -1.03
MRPS28-205ENST00000519386 APPBP2Q92624 585 aa8.61□□□□□ -1.03
MRPS28-205ENST00000519386 TTC14Q96N46 770 aa8.61□□□□□ -1.03
MRPS28-205ENST00000519386 GMLQ99445 158 aa8.61□□□□□ -1.03
MRPS28-205ENST00000519386 SLKQ9H2G2 1235 aaPredicted RBP8.61□□□□□ -1.03
MRPS28-205ENST00000519386 HACL1Q9UJ83 578 aa8.61□□□□□ -1.03
MRPS28-205ENST00000519386 COL1A1P02452 1464 aaPredicted RBP8.61□□□□□ -1.03
MRPS28-205ENST00000519386 MAST3O60307 1309 aa8.6□□□□□ -1.03
MRPS28-205ENST00000519386 FOCADQ5VW36 1801 aa8.6□□□□□ -1.03
MRPS28-205ENST00000519386 IQCA1LA6NCM1 817 aa8.6□□□□□ -1.03
MRPS28-205ENST00000519386 HMGB1P09429 215 aaKnown RBP8.6□□□□□ -1.03
MRPS28-205ENST00000519386 PTMSP20962 102 aa8.6□□□□□ -1.03
MRPS28-205ENST00000519386 PBX2P40425 430 aa8.6□□□□□ -1.03
MRPS28-205ENST00000519386 MCAMP43121 646 aa8.6□□□□□ -1.03
MRPS28-205ENST00000519386 PTH1RQ03431 593 aa8.6□□□□□ -1.03
MRPS28-205ENST00000519386 RASGRF1Q13972 1273 aa8.6□□□□□ -1.03
MRPS28-205ENST00000519386 ANKRD1Q15327 319 aa8.6□□□□□ -1.03
MRPS28-205ENST00000519386 UBE3CQ15386 1083 aa8.6□□□□□ -1.03
MRPS28-205ENST00000519386 CREB3L3Q68CJ9 461 aa8.6□□□□□ -1.03
MRPS28-205ENST00000519386 ZNF589Q86UQ0 364 aaPredicted RBP8.6□□□□□ -1.03
MRPS28-205ENST00000519386 AGBL3Q8NEM8 1001 aa8.6□□□□□ -1.03
MRPS28-205ENST00000519386 DPF2Q92785 391 aa8.6□□□□□ -1.03
MRPS28-205ENST00000519386 TAF1DQ9H5J8 278 aaPredicted RBP8.6□□□□□ -1.03
MRPS28-205ENST00000519386 SH2B1Q9NRF2 756 aaPredicted RBP8.6□□□□□ -1.03
MRPS28-205ENST00000519386 GNL3LQ9NVN8 582 aaKnown RBP8.6□□□□□ -1.03
MRPS28-205ENST00000519386 CNOT7Q9UIV1 285 aaKnown RBP8.6□□□□□ -1.03
MRPS28-205ENST00000519386 CYP46A1Q9Y6A2 500 aa8.6□□□□□ -1.03
MRPS28-205ENST00000519386 CDK5RAP2Q96SN8 1893 aa8.6□□□□□ -1.03
MRPS28-205ENST00000519386 SLC27A2O14975 620 aa8.59□□□□□ -1.03
MRPS28-205ENST00000519386 EPHX2P34913 555 aa8.59□□□□□ -1.03
MRPS28-205ENST00000519386 FKBP1AP62942 108 aaKnown RBP8.59□□□□□ -1.03
MRPS28-205ENST00000519386 NUCB2P80303 420 aa8.59□□□□□ -1.03
MRPS28-205ENST00000519386 RAB3GAP1Q15042 981 aa8.59□□□□□ -1.03
MRPS28-205ENST00000519386 NFKBIBQ15653 356 aa8.59□□□□□ -1.03
MRPS28-205ENST00000519386 GRIK5Q16478 980 aa8.59□□□□□ -1.03
MRPS28-205ENST00000519386 MFSD14BQ5SR56 506 aa8.59□□□□□ -1.03
MRPS28-205ENST00000519386 PI16Q6UXB8 463 aa8.59□□□□□ -1.03
MRPS28-205ENST00000519386 RUFY3Q7L099 469 aa8.59□□□□□ -1.03
MRPS28-205ENST00000519386 TRPM4Q8TD43 1214 aa8.59□□□□□ -1.03
MRPS28-205ENST00000519386 EDC3Q96F86 508 aaKnown RBP8.59□□□□□ -1.03
MRPS28-205ENST00000519386 ZSCAN31Q96LW9 406 aaPredicted RBP8.59□□□□□ -1.03
MRPS28-205ENST00000519386 CTNNA3Q9UI47 895 aa8.59□□□□□ -1.03
MRPS28-205ENST00000519386 WDR19Q8NEZ3 1342 aa8.58□□□□□ -1.04
MRPS28-205ENST00000519386 MYO3BQ8WXR4 1341 aa8.58□□□□□ -1.04
MRPS28-205ENST00000519386 DDX11L8A8MPP1 907 aa8.58□□□□□ -1.04
MRPS28-205ENST00000519386 F8W031 263 aaPredicted RBP8.58□□□□□ -1.04
MRPS28-205ENST00000519386 H7C1D1 291 aa8.58□□□□□ -1.04
MRPS28-205ENST00000519386 EGFRP00533 1210 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms