RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 OPTNQ96CV9 577 aa16.25■□□□□ 0.19
VEGFA-219ENST00000518824 WRNIP1Q96S55 665 aa16.25■□□□□ 0.19
VEGFA-219ENST00000518824 BOLA2Q9H3K6 86 aa16.25■□□□□ 0.19
VEGFA-219ENST00000518824 R3HDMLQ9H3Y0 253 aa16.25■□□□□ 0.19
VEGFA-219ENST00000518824 PRDM10Q9NQV6 1147 aa16.25■□□□□ 0.19
VEGFA-219ENST00000518824 SNCAIPQ9Y6H5 919 aa16.25■□□□□ 0.19
VEGFA-219ENST00000518824 LAMB1P07942 1786 aa16.25■□□□□ 0.19
VEGFA-219ENST00000518824 FAM196BA6NMK8 535 aa16.24■□□□□ 0.19
VEGFA-219ENST00000518824 CYP7A1P22680 504 aa16.24■□□□□ 0.19
VEGFA-219ENST00000518824 TM4SF4P48230 202 aa16.24■□□□□ 0.19
VEGFA-219ENST00000518824 TSHZ3Q63HK5 1081 aa16.24■□□□□ 0.19
VEGFA-219ENST00000518824 MAGEB6Q8N7X4 407 aa16.24■□□□□ 0.19
VEGFA-219ENST00000518824 MIGA1Q8NAN2 632 aa16.24■□□□□ 0.19
VEGFA-219ENST00000518824 DNAJC2Q99543 621 aaKnown RBP16.24■□□□□ 0.19
VEGFA-219ENST00000518824 SUPT16HQ9Y5B9 1047 aaKnown RBP16.24■□□□□ 0.19
VEGFA-219ENST00000518824 SIPA1L1O43166 1804 aa16.24■□□□□ 0.19
VEGFA-219ENST00000518824 GOLIM4O00461 696 aa16.23■□□□□ 0.19
VEGFA-219ENST00000518824 TEX11Q8IYF3 940 aa16.23■□□□□ 0.19
VEGFA-219ENST00000518824 EXOC6Q8TAG9 804 aa16.23■□□□□ 0.19
VEGFA-219ENST00000518824 OTUD7AQ8TE49 926 aaPredicted RBP16.23■□□□□ 0.19
VEGFA-219ENST00000518824 ZNF112Q9UJU3 913 aa16.23■□□□□ 0.19
VEGFA-219ENST00000518824 FOCADQ5VW36 1801 aa16.22■□□□□ 0.19
VEGFA-219ENST00000518824 IGF2BP3O00425 579 aaKnown RBP eCLIP16.22■□□□□ 0.19
VEGFA-219ENST00000518824 TBC1D8O95759 1140 aa16.22■□□□□ 0.19
VEGFA-219ENST00000518824 PPP4CP60510 307 aa16.22■□□□□ 0.19
VEGFA-219ENST00000518824 ZSCAN29Q8IWY8 852 aaPredicted RBP16.22■□□□□ 0.19
VEGFA-219ENST00000518824 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.22■□□□□ 0.19
VEGFA-219ENST00000518824 OTUD5Q96G74 571 aa16.22■□□□□ 0.19
VEGFA-219ENST00000518824 PTPN18Q99952 460 aa16.22■□□□□ 0.19
VEGFA-219ENST00000518824 ZNF341Q9BYN7 854 aa16.22■□□□□ 0.19
VEGFA-219ENST00000518824 OSBPL5Q9H0X9 879 aaPredicted RBP16.22■□□□□ 0.19
VEGFA-219ENST00000518824 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.22■□□□□ 0.19
VEGFA-219ENST00000518824 UNCXA6NJT0 531 aa16.21■□□□□ 0.19
VEGFA-219ENST00000518824 PHF20L1A8MW92 1017 aa16.21■□□□□ 0.19
VEGFA-219ENST00000518824 CA12O43570 354 aa16.21■□□□□ 0.19
VEGFA-219ENST00000518824 ZBTB48P10074 688 aaPredicted RBP16.21■□□□□ 0.19
VEGFA-219ENST00000518824 ATP5JP18859 108 aa16.21■□□□□ 0.19
VEGFA-219ENST00000518824 DCAF15Q66K64 600 aa16.21■□□□□ 0.19
VEGFA-219ENST00000518824 MAPKAPK5Q8IW41 473 aa16.21■□□□□ 0.19
VEGFA-219ENST00000518824 TNS4Q8IZW8 715 aa16.21■□□□□ 0.19
VEGFA-219ENST00000518824 TGFBRAP1Q8WUH2 860 aa16.21■□□□□ 0.19
VEGFA-219ENST00000518824 MS4A4AQ96JQ5 239 aa16.21■□□□□ 0.19
VEGFA-219ENST00000518824 CSADQ9Y600 493 aa16.21■□□□□ 0.19
VEGFA-219ENST00000518824 MANSC4A6NHS7 340 aaPredicted RBP16.2■□□□□ 0.18
VEGFA-219ENST00000518824 SPDYE5A6NIY4 337 aa16.2■□□□□ 0.18
VEGFA-219ENST00000518824 PDE6AP16499 860 aa16.2■□□□□ 0.18
VEGFA-219ENST00000518824 MAP3K10Q02779 954 aa16.2■□□□□ 0.18
VEGFA-219ENST00000518824 RRP1BQ14684 758 aaKnown RBP16.2■□□□□ 0.18
VEGFA-219ENST00000518824 SLC4A8Q2Y0W8 1093 aa16.2■□□□□ 0.18
VEGFA-219ENST00000518824 HAUS7Q99871 368 aa16.2■□□□□ 0.18
VEGFA-219ENST00000518824 SAGE1Q9NXZ1 904 aa16.2■□□□□ 0.18
VEGFA-219ENST00000518824 TCRBV5S4A2TA0A5A2 114 aa16.19■□□□□ 0.18
VEGFA-219ENST00000518824 NPM3O75607 178 aaKnown RBP16.19■□□□□ 0.18
VEGFA-219ENST00000518824 IRX6P78412 446 aaPredicted RBP16.19■□□□□ 0.18
VEGFA-219ENST00000518824 MAP3K12Q12852 859 aa16.19■□□□□ 0.18
VEGFA-219ENST00000518824 CCDC84Q86UT8 332 aaPredicted RBP16.19■□□□□ 0.18
VEGFA-219ENST00000518824 IFNL1Q8IU54 200 aa16.19■□□□□ 0.18
VEGFA-219ENST00000518824 BRI3BPQ8WY22 251 aa16.19■□□□□ 0.18
VEGFA-219ENST00000518824 HOOK2Q96ED9 719 aa16.19■□□□□ 0.18
VEGFA-219ENST00000518824 PAG1Q9NWQ8 432 aa16.19■□□□□ 0.18
VEGFA-219ENST00000518824 SAP30BPQ9UHR5 308 aaKnown RBP16.19■□□□□ 0.18
VEGFA-219ENST00000518824 FLT1P17948 1338 aa16.19■□□□□ 0.18
VEGFA-219ENST00000518824 TESPA1A2RU30 521 aaPredicted RBP16.18■□□□□ 0.18
VEGFA-219ENST00000518824 IRF6O14896 467 aa16.18■□□□□ 0.18
VEGFA-219ENST00000518824 BAG3O95817 575 aa16.18■□□□□ 0.18
VEGFA-219ENST00000518824 SREBF2Q12772 1141 aa16.18■□□□□ 0.18
VEGFA-219ENST00000518824 SLC9C2Q5TAH2 1124 aa16.18■□□□□ 0.18
VEGFA-219ENST00000518824 ERO1BQ86YB8 467 aa16.18■□□□□ 0.18
VEGFA-219ENST00000518824 REM2Q8IYK8 340 aaPredicted RBP16.18■□□□□ 0.18
VEGFA-219ENST00000518824 RIOK1Q9BRS2 568 aaKnown RBP16.18■□□□□ 0.18
VEGFA-219ENST00000518824 NOL10Q9BSC4 688 aaKnown RBP16.18■□□□□ 0.18
VEGFA-219ENST00000518824 PALD1Q9ULE6 856 aa16.18■□□□□ 0.18
VEGFA-219ENST00000518824 ZNF532Q9HCE3 1301 aa16.18■□□□□ 0.18
VEGFA-219ENST00000518824 COL2A1P02458 1487 aaPredicted RBP16.17■□□□□ 0.18
VEGFA-219ENST00000518824 DOCK1Q14185 1865 aa16.17■□□□□ 0.18
VEGFA-219ENST00000518824 MAP4K4O95819 1239 aaPredicted RBP16.17■□□□□ 0.18
VEGFA-219ENST00000518824 EVX2Q03828 476 aa16.17■□□□□ 0.18
VEGFA-219ENST00000518824 TTF1Q15361 905 aaPredicted RBP16.17■□□□□ 0.18
VEGFA-219ENST00000518824 SHROOM1Q2M3G4 852 aaPredicted RBP16.17■□□□□ 0.18
VEGFA-219ENST00000518824 DNAJC18Q9H819 358 aa16.17■□□□□ 0.18
VEGFA-219ENST00000518824 ECHDC1Q9NTX5 307 aa16.17■□□□□ 0.18
VEGFA-219ENST00000518824 MYH1P12882 1939 aa16.17■□□□□ 0.18
VEGFA-219ENST00000518824 MYH7P12883 1935 aa16.17■□□□□ 0.18
VEGFA-219ENST00000518824 PHIPQ8WWQ0 1821 aa16.17■□□□□ 0.18
VEGFA-219ENST00000518824 CCL15-CCL14A0A0B4J2E2 113 aa16.16■□□□□ 0.18
VEGFA-219ENST00000518824 IGHDP01880 384 aa16.16■□□□□ 0.18
VEGFA-219ENST00000518824 JAG1P78504 1218 aa16.16■□□□□ 0.18
VEGFA-219ENST00000518824 PPIL2Q13356 520 aa16.16■□□□□ 0.18
VEGFA-219ENST00000518824 CCL15Q16663 113 aa16.16■□□□□ 0.18
VEGFA-219ENST00000518824 NOL9Q5SY16 702 aaKnown RBP16.16■□□□□ 0.18
VEGFA-219ENST00000518824 FAM43AQ8N2R8 423 aa16.16■□□□□ 0.18
VEGFA-219ENST00000518824 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.16■□□□□ 0.183e-7■■■■■ 34.2
VEGFA-219ENST00000518824 ATAD5Q96QE3 1844 aa16.15■□□□□ 0.18
VEGFA-219ENST00000518824 PLCG2P16885 1265 aa16.15■□□□□ 0.18
VEGFA-219ENST00000518824 ADD2P35612 726 aa16.15■□□□□ 0.18
VEGFA-219ENST00000518824 HDAC1Q13547 482 aaPredicted RBP16.15■□□□□ 0.18
VEGFA-219ENST00000518824 DDX60LQ5H9U9 1706 aaKnown RBP16.15■□□□□ 0.18
VEGFA-219ENST00000518824 IFFO2Q5TF58 517 aa16.15■□□□□ 0.18
VEGFA-219ENST00000518824 ANKRD45Q5TZF3 282 aa16.15■□□□□ 0.18
VEGFA-219ENST00000518824 LCORLQ8N3X6 602 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms