RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 TCRBV5S4A2TA0A5A2 114 aa26.63■■□□□ 1.85
VEGFA-217ENST00000518538 UNCXA6NJT0 531 aa26.63■■□□□ 1.85
VEGFA-217ENST00000518538 DYNLL1P63167 89 aaKnown RBP26.63■■□□□ 1.85
VEGFA-217ENST00000518538 THSD7BQ9C0I4 1608 aa26.63■■□□□ 1.85
VEGFA-217ENST00000518538 FAM155AB1AL88 458 aaPredicted RBP26.62■■□□□ 1.85
VEGFA-217ENST00000518538 CENPBP07199 599 aaPredicted RBP26.62■■□□□ 1.85
VEGFA-217ENST00000518538 SLC10A3P09131 477 aa26.62■■□□□ 1.85
VEGFA-217ENST00000518538 ADD2P35612 726 aa26.62■■□□□ 1.85
VEGFA-217ENST00000518538 PDE1AP54750 535 aa26.62■■□□□ 1.85
VEGFA-217ENST00000518538 DCAF15Q66K64 600 aa26.62■■□□□ 1.85
VEGFA-217ENST00000518538 KBTBD3Q8NAB2 608 aa26.62■■□□□ 1.85
VEGFA-217ENST00000518538 COL2A1P02458 1487 aaPredicted RBP26.62■■□□□ 1.85
VEGFA-217ENST00000518538 ATRNL1Q5VV63 1379 aa26.61■■□□□ 1.85
VEGFA-217ENST00000518538 ZSCAN25Q6NSZ9 544 aa26.61■■□□□ 1.85
VEGFA-217ENST00000518538 SH3BP5LQ7L8J4 393 aa26.61■■□□□ 1.85
VEGFA-217ENST00000518538 RASAL3Q86YV0 1011 aa26.61■■□□□ 1.85
VEGFA-217ENST00000518538 ZSCAN29Q8IWY8 852 aaPredicted RBP26.61■■□□□ 1.85
VEGFA-217ENST00000518538 OSBPL5Q9H0X9 879 aaPredicted RBP26.61■■□□□ 1.85
VEGFA-217ENST00000518538 MAP2K2P36507 400 aa26.6■■□□□ 1.85
VEGFA-217ENST00000518538 NOGQ13253 232 aa26.6■■□□□ 1.85
VEGFA-217ENST00000518538 UBE3CQ15386 1083 aa26.6■■□□□ 1.85
VEGFA-217ENST00000518538 TGFBRAP1Q8WUH2 860 aa26.6■■□□□ 1.85
VEGFA-217ENST00000518538 CSRNP1Q96S65 589 aa26.6■■□□□ 1.85
VEGFA-217ENST00000518538 RIOK1Q9BRS2 568 aaKnown RBP26.6■■□□□ 1.85
VEGFA-217ENST00000518538 MAGEB6P1A0A0J9YX57 407 aa26.59■■□□□ 1.85
VEGFA-217ENST00000518538 DDTLA6NHG4 134 aaPredicted RBP26.59■■□□□ 1.85
VEGFA-217ENST00000518538 AOC2O75106 756 aa26.59■■□□□ 1.85
VEGFA-217ENST00000518538 ANKRD13AQ8IZ07 590 aa26.59■■□□□ 1.85
VEGFA-217ENST00000518538 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.59■■□□□ 1.852e-42■□□□□ 10.2
VEGFA-217ENST00000518538 MIGA2Q7L4E1 593 aa26.58■■□□□ 1.85
VEGFA-217ENST00000518538 ZNF341Q9BYN7 854 aa26.58■■□□□ 1.85
VEGFA-217ENST00000518538 FLT1P17948 1338 aa26.58■■□□□ 1.85
VEGFA-217ENST00000518538 MYH7P12883 1935 aa26.57■■□□□ 1.84
VEGFA-217ENST00000518538 MAP3K9P80192 1104 aa26.57■■□□□ 1.84
VEGFA-217ENST00000518538 MAPKAPK5Q8IW41 473 aa26.57■■□□□ 1.84
VEGFA-217ENST00000518538 CLMNQ96JQ2 1002 aa26.57■■□□□ 1.84
VEGFA-217ENST00000518538 FOCADQ5VW36 1801 aa26.57■■□□□ 1.84
VEGFA-217ENST00000518538 AK9Q5TCS8 1911 aa26.57■■□□□ 1.84
VEGFA-217ENST00000518538 OTOFQ9HC10 1997 aa26.57■■□□□ 1.84
VEGFA-217ENST00000518538 CDK5RAP2Q96SN8 1893 aa26.56■■□□□ 1.84
VEGFA-217ENST00000518538 SLFNL1Q499Z3 407 aa26.56■■□□□ 1.84
VEGFA-217ENST00000518538 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.56■■□□□ 1.84
VEGFA-217ENST00000518538 SLC10A4Q96EP9 437 aa26.56■■□□□ 1.84
VEGFA-217ENST00000518538 WRNIP1Q96S55 665 aa26.56■■□□□ 1.84
VEGFA-217ENST00000518538 CHGBP05060 677 aa26.55■■□□□ 1.84
VEGFA-217ENST00000518538 USP5P45974 858 aa26.55■■□□□ 1.84
VEGFA-217ENST00000518538 LRRFIP1Q32MZ4 808 aaKnown RBP26.55■■□□□ 1.84
VEGFA-217ENST00000518538 PLEKHM2Q8IWE5 1019 aa26.55■■□□□ 1.84
VEGFA-217ENST00000518538 DHX36Q9H2U1 1008 aaKnown RBP26.55■■□□□ 1.84
VEGFA-217ENST00000518538 ZFYP08048 801 aaPredicted RBP26.54■■□□□ 1.84
VEGFA-217ENST00000518538 MAP3K10Q02779 954 aa26.54■■□□□ 1.84
VEGFA-217ENST00000518538 VGLL4Q14135 290 aa26.54■■□□□ 1.84
VEGFA-217ENST00000518538 CRNKL1Q9BZJ0 848 aaKnown RBP26.54■■□□□ 1.84
VEGFA-217ENST00000518538 OSBPL3Q9H4L5 887 aa26.54■■□□□ 1.84
VEGFA-217ENST00000518538 ZNF112Q9UJU3 913 aa26.54■■□□□ 1.84
VEGFA-217ENST00000518538 CSADQ9Y600 493 aa26.54■■□□□ 1.84
VEGFA-217ENST00000518538 RNF113AO15541 343 aaKnown RBP26.53■■□□□ 1.84
VEGFA-217ENST00000518538 MAP2K1Q02750 393 aaPredicted RBP26.53■■□□□ 1.84
VEGFA-217ENST00000518538 LCORLQ8N3X6 602 aa26.53■■□□□ 1.84
VEGFA-217ENST00000518538 ZIC5Q96T25 663 aa26.53■■□□□ 1.84
VEGFA-217ENST00000518538 FSD1Q9BTV5 496 aa26.53■■□□□ 1.84
VEGFA-217ENST00000518538 TBC1D12O60347 775 aa26.52■■□□□ 1.84
VEGFA-217ENST00000518538 MBD4O95243 580 aa26.52■■□□□ 1.84
VEGFA-217ENST00000518538 NEFLP07196 543 aa26.52■■□□□ 1.84
VEGFA-217ENST00000518538 KIF23Q02241 960 aaPredicted RBP26.52■■□□□ 1.84
VEGFA-217ENST00000518538 SPRYD7Q5W111 196 aa26.52■■□□□ 1.84
VEGFA-217ENST00000518538 EVI5LQ96CN4 794 aa26.52■■□□□ 1.84
VEGFA-217ENST00000518538 ARMT1Q9H993 441 aa26.52■■□□□ 1.84
VEGFA-217ENST00000518538 APPBP2Q92624 585 aa26.51■■□□□ 1.83
VEGFA-217ENST00000518538 WNK4Q96J92 1243 aa26.51■■□□□ 1.83
VEGFA-217ENST00000518538 PUS7LQ9H0K6 701 aaKnown RBP26.51■■□□□ 1.83
VEGFA-217ENST00000518538 ELP3Q9H9T3 547 aa26.51■■□□□ 1.83
VEGFA-217ENST00000518538 WBP1LQ9NX94 342 aa26.51■■□□□ 1.83
VEGFA-217ENST00000518538 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.51■■□□□ 1.83
VEGFA-217ENST00000518538 PI4KBQ9UBF8 816 aa26.51■■□□□ 1.83
VEGFA-217ENST00000518538 ZBTB48P10074 688 aaPredicted RBP26.5■■□□□ 1.83
VEGFA-217ENST00000518538 INPP5BP32019 993 aa26.5■■□□□ 1.83
VEGFA-217ENST00000518538 ZKSCAN4Q969J2 545 aaPredicted RBP26.5■■□□□ 1.83
VEGFA-217ENST00000518538 AIDAQ96BJ3 306 aa26.5■■□□□ 1.83
VEGFA-217ENST00000518538 SAP30BPQ9UHR5 308 aaKnown RBP26.5■■□□□ 1.83
VEGFA-217ENST00000518538 PALD1Q9ULE6 856 aa26.5■■□□□ 1.83
VEGFA-217ENST00000518538 SNCAIPQ9Y6H5 919 aa26.5■■□□□ 1.83
VEGFA-217ENST00000518538 PHF20L1A8MW92 1017 aa26.49■■□□□ 1.83
VEGFA-217ENST00000518538 HSPA1AP0DMV8 641 aaKnown RBP26.49■■□□□ 1.83
VEGFA-217ENST00000518538 HSPA1BP0DMV9 641 aaKnown RBP26.49■■□□□ 1.83
VEGFA-217ENST00000518538 MKRN3Q13064 507 aaKnown RBP26.49■■□□□ 1.83
VEGFA-217ENST00000518538 REM2Q8IYK8 340 aaPredicted RBP26.49■■□□□ 1.83
VEGFA-217ENST00000518538 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.49■■□□□ 1.833e-7■■■■■ 34.2
VEGFA-217ENST00000518538 HERC5Q9UII4 1024 aaKnown RBP26.49■■□□□ 1.83
VEGFA-217ENST00000518538 HLA-DOAP06340 250 aa26.48■■□□□ 1.83
VEGFA-217ENST00000518538 SLURP2P0DP57 97 aa26.48■■□□□ 1.83
VEGFA-217ENST00000518538 PDE4AP27815 886 aa26.48■■□□□ 1.83
VEGFA-217ENST00000518538 NOL9Q5SY16 702 aaKnown RBP26.48■■□□□ 1.83
VEGFA-217ENST00000518538 OSBP2Q969R2 916 aa26.48■■□□□ 1.83
VEGFA-217ENST00000518538 OPTNQ96CV9 577 aa26.48■■□□□ 1.83
VEGFA-217ENST00000518538 SPDYE5A6NIY4 337 aa26.47■■□□□ 1.83
VEGFA-217ENST00000518538 GJA5P36382 358 aa26.47■■□□□ 1.83
VEGFA-217ENST00000518538 FOXP4Q8IVH2 680 aaPredicted RBP26.47■■□□□ 1.83
VEGFA-217ENST00000518538 SDR42E1Q8WUS8 393 aa26.47■■□□□ 1.83
VEGFA-217ENST00000518538 DCP1AQ9NPI6 582 aaPredicted RBP26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms