RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 STRN3Q13033 797 aa17.99■□□□□ 0.47
TRIM41-207ENST00000515223 GPR162Q16538 588 aa17.99■□□□□ 0.47
TRIM41-207ENST00000515223 AZI2Q9H6S1 392 aa17.99■□□□□ 0.47
TRIM41-207ENST00000515223 RNF216Q9NWF9 866 aaPredicted RBP17.99■□□□□ 0.47
TRIM41-207ENST00000515223 CCDC169A6NNP5 214 aa17.99■□□□□ 0.47
TRIM41-207ENST00000515223 PLCD1P51178 756 aa17.99■□□□□ 0.47
TRIM41-207ENST00000515223 MAK16Q9BXY0 300 aaKnown RBP17.99■□□□□ 0.47
TRIM41-207ENST00000515223 SNX14Q9Y5W7 946 aa17.99■□□□□ 0.47
TRIM41-207ENST00000515223 M0QZ92 97 aa17.99■□□□□ 0.47
TRIM41-207ENST00000515223 IRX3P78415 501 aaPredicted RBP17.99■□□□□ 0.47
TRIM41-207ENST00000515223 A0A1B0GUL7 405 aa17.98■□□□□ 0.47
TRIM41-207ENST00000515223 ABCC1P33527 1531 aa17.98■□□□□ 0.47
TRIM41-207ENST00000515223 ZFYVE9O95405 1425 aa17.98■□□□□ 0.47
TRIM41-207ENST00000515223 PTPDC1A2A3K4 754 aa17.98■□□□□ 0.47
TRIM41-207ENST00000515223 SPC25Q9HBM1 224 aa17.98■□□□□ 0.47
TRIM41-207ENST00000515223 BABAM1Q9NWV8 329 aa17.98■□□□□ 0.47
TRIM41-207ENST00000515223 EXOC7Q9UPT5 735 aa17.98■□□□□ 0.47
TRIM41-207ENST00000515223 STK24Q9Y6E0 443 aa17.98■□□□□ 0.47
TRIM41-207ENST00000515223 EPB41P11171 864 aaKnown RBP17.98■□□□□ 0.47
TRIM41-207ENST00000515223 CCT6AP40227 531 aaKnown RBP17.98■□□□□ 0.47
TRIM41-207ENST00000515223 DLGAP5Q15398 846 aa17.98■□□□□ 0.47
TRIM41-207ENST00000515223 ZYXQ15942 572 aaKnown RBP17.98■□□□□ 0.47
TRIM41-207ENST00000515223 CDAN1Q8IWY9 1227 aa17.98■□□□□ 0.47
TRIM41-207ENST00000515223 KIFAP3Q92845 792 aa17.98■□□□□ 0.47
TRIM41-207ENST00000515223 OGFRQ9NZT2 677 aa17.98■□□□□ 0.47
TRIM41-207ENST00000515223 METTL22Q9BUU2 404 aaPredicted RBP17.98■□□□□ 0.47
TRIM41-207ENST00000515223 ABCC10Q5T3U5 1492 aa17.98■□□□□ 0.47
TRIM41-207ENST00000515223 TRPC3Q13507 836 aa17.97■□□□□ 0.47
TRIM41-207ENST00000515223 FLAD1Q8NFF5 587 aa17.97■□□□□ 0.47
TRIM41-207ENST00000515223 SMCR8Q8TEV9 937 aaPredicted RBP17.97■□□□□ 0.47
TRIM41-207ENST00000515223 TBC1D22AQ8WUA7 517 aa17.97■□□□□ 0.47
TRIM41-207ENST00000515223 RNF34Q969K3 372 aa17.97■□□□□ 0.47
TRIM41-207ENST00000515223 TMEM87BQ96K49 555 aa17.97■□□□□ 0.47
TRIM41-207ENST00000515223 NSRP1Q9H0G5 558 aaKnown RBP17.97■□□□□ 0.47
TRIM41-207ENST00000515223 SLC5A4Q9NY91 659 aa17.97■□□□□ 0.47
TRIM41-207ENST00000515223 DCAF17Q5H9S7 520 aaPredicted RBP17.97■□□□□ 0.47
TRIM41-207ENST00000515223 DPY19L2Q6NUT2 758 aa17.97■□□□□ 0.47
TRIM41-207ENST00000515223 PAIP2Q9BPZ3 127 aaKnown RBP17.97■□□□□ 0.47
TRIM41-207ENST00000515223 ZKSCAN3Q9BRR0 538 aa17.97■□□□□ 0.47
TRIM41-207ENST00000515223 SLC1A4P43007 532 aa17.97■□□□□ 0.47
TRIM41-207ENST00000515223 UBXN1Q04323 297 aa17.97■□□□□ 0.47
TRIM41-207ENST00000515223 PRKG1Q13976 671 aa17.97■□□□□ 0.47
TRIM41-207ENST00000515223 GIMAP7Q8NHV1 300 aa17.97■□□□□ 0.47
TRIM41-207ENST00000515223 GTF3C6Q969F1 213 aa17.97■□□□□ 0.47
TRIM41-207ENST00000515223 MYCLP12524 364 aaPredicted RBP17.97■□□□□ 0.47
TRIM41-207ENST00000515223 DNM2P50570 870 aa17.97■□□□□ 0.47
TRIM41-207ENST00000515223 ARHGEF10O15013 1369 aa17.96■□□□□ 0.47
TRIM41-207ENST00000515223 IFNKQ9P0W0 207 aa17.96■□□□□ 0.47
TRIM41-207ENST00000515223 ODF2LQ9ULJ1 636 aa17.96■□□□□ 0.47
TRIM41-207ENST00000515223 CHMP2AO43633 222 aa17.96■□□□□ 0.47
TRIM41-207ENST00000515223 MXRA7P84157 204 aa17.96■□□□□ 0.47
TRIM41-207ENST00000515223 ARHGEF35A5YM69 484 aa17.96■□□□□ 0.47
TRIM41-207ENST00000515223 TNFAIP1Q13829 316 aa17.96■□□□□ 0.47
TRIM41-207ENST00000515223 NOX5Q96PH1 765 aa17.96■□□□□ 0.47
TRIM41-207ENST00000515223 PTPRTO14522 1441 aa17.96■□□□□ 0.47
TRIM41-207ENST00000515223 HOXB7P09629 217 aa17.96■□□□□ 0.47
TRIM41-207ENST00000515223 EAPPQ56P03 285 aaPredicted RBP17.96■□□□□ 0.47
TRIM41-207ENST00000515223 MTUS1Q9ULD2 1270 aa17.96■□□□□ 0.47
TRIM41-207ENST00000515223 CSADQ9Y600 493 aa17.96■□□□□ 0.47
TRIM41-207ENST00000515223 PLIN2Q99541 437 aa17.95■□□□□ 0.46
TRIM41-207ENST00000515223 EIF4G3O43432 1585 aaKnown RBP17.95■□□□□ 0.46
TRIM41-207ENST00000515223 KDM5AP29375 1690 aaKnown RBP17.95■□□□□ 0.46
TRIM41-207ENST00000515223 TRAF5O00463 557 aa17.95■□□□□ 0.46
TRIM41-207ENST00000515223 ZBTB24O43167 697 aaPredicted RBP17.95■□□□□ 0.46
TRIM41-207ENST00000515223 RXRAP19793 462 aa17.95■□□□□ 0.46
TRIM41-207ENST00000515223 RAPGEF1Q13905 1077 aa17.95■□□□□ 0.46
TRIM41-207ENST00000515223 JAKMIP2Q96AA8 810 aa17.95■□□□□ 0.46
TRIM41-207ENST00000515223 ABCC2Q92887 1545 aa17.95■□□□□ 0.46
TRIM41-207ENST00000515223 PNMA6EA0A0J9YXQ4 647 aa17.95■□□□□ 0.46
TRIM41-207ENST00000515223 KRT5P13647 590 aa17.95■□□□□ 0.46
TRIM41-207ENST00000515223 MCM6Q14566 821 aa17.95■□□□□ 0.46
TRIM41-207ENST00000515223 NSMFQ6X4W1 530 aa17.95■□□□□ 0.46
TRIM41-207ENST00000515223 HACE1Q8IYU2 909 aa17.95■□□□□ 0.46
TRIM41-207ENST00000515223 PPIP5K2O43314 1243 aa17.95■□□□□ 0.46
TRIM41-207ENST00000515223 TIMM10P62072 90 aa17.95■□□□□ 0.46
TRIM41-207ENST00000515223 RILPL1Q5EBL4 403 aa17.95■□□□□ 0.46
TRIM41-207ENST00000515223 CPXCR1Q8N123 301 aa17.95■□□□□ 0.46
TRIM41-207ENST00000515223 TTC14Q96N46 770 aa17.95■□□□□ 0.46
TRIM41-207ENST00000515223 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.95■□□□□ 0.46
TRIM41-207ENST00000515223 DEXIO95424 95 aa17.94■□□□□ 0.46
TRIM41-207ENST00000515223 CBX8Q9HC52 389 aa17.94■□□□□ 0.46
TRIM41-207ENST00000515223 BRD1O95696 1058 aa17.94■□□□□ 0.46
TRIM41-207ENST00000515223 STX17P56962 302 aa17.94■□□□□ 0.46
TRIM41-207ENST00000515223 LPIN2Q92539 896 aa17.94■□□□□ 0.46
TRIM41-207ENST00000515223 VWA3AA6NCI4 1184 aa17.94■□□□□ 0.46
TRIM41-207ENST00000515223 SH3BP5O60239 455 aa17.94■□□□□ 0.46
TRIM41-207ENST00000515223 TERF1P54274 439 aa17.94■□□□□ 0.46
TRIM41-207ENST00000515223 KIF22Q14807 665 aa17.94■□□□□ 0.46
TRIM41-207ENST00000515223 KIFC2Q96AC6 838 aa17.94■□□□□ 0.46
TRIM41-207ENST00000515223 NACA2Q9H009 215 aa17.94■□□□□ 0.46
TRIM41-207ENST00000515223 LUC7L2Q9Y383 392 aaKnown RBP17.94■□□□□ 0.46
TRIM41-207ENST00000515223 ZNF500O60304 480 aaPredicted RBP17.93■□□□□ 0.46
TRIM41-207ENST00000515223 IL13P35225 146 aa17.93■□□□□ 0.46
TRIM41-207ENST00000515223 INF2Q27J81 1249 aa17.93■□□□□ 0.46
TRIM41-207ENST00000515223 CFAP58Q5T655 872 aa17.93■□□□□ 0.46
TRIM41-207ENST00000515223 ATL3Q6DD88 541 aa17.93■□□□□ 0.46
TRIM41-207ENST00000515223 MAP7D1Q3KQU3 841 aa17.93■□□□□ 0.46
TRIM41-207ENST00000515223 APPBP2Q92624 585 aa17.93■□□□□ 0.46
TRIM41-207ENST00000515223 ARMT1Q9H993 441 aa17.93■□□□□ 0.46
TRIM41-207ENST00000515223 SLAIN2Q9P270 581 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms