RNA–Protein interactions for RNA: ENST00000513996.5

HERC4-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-214ENST00000513996 IGF2BP3O00425 579 aaKnown RBP eCLIP10.71□□□□□ -0.69
HERC4-214ENST00000513996 ZBTB48P10074 688 aaPredicted RBP10.71□□□□□ -0.69
HERC4-214ENST00000513996 INPP5BP32019 993 aa10.71□□□□□ -0.69
HERC4-214ENST00000513996 IFNL1Q8IU54 200 aa10.71□□□□□ -0.69
HERC4-214ENST00000513996 RHPN1Q8TCX5 695 aa10.71□□□□□ -0.69
HERC4-214ENST00000513996 WRNIP1Q96S55 665 aa10.71□□□□□ -0.69
HERC4-214ENST00000513996 RAI14Q9P0K7 980 aa10.71□□□□□ -0.69
HERC4-214ENST00000513996 LRP2BPQ9P2M1 347 aa10.71□□□□□ -0.69
HERC4-214ENST00000513996 ZNF112Q9UJU3 913 aa10.71□□□□□ -0.69
HERC4-214ENST00000513996 MYH2Q9UKX2 1941 aa10.71□□□□□ -0.69
HERC4-214ENST00000513996 SNCAIPQ9Y6H5 919 aa10.71□□□□□ -0.69
HERC4-214ENST00000513996 AKAP11Q9UKA4 1901 aa10.7□□□□□ -0.7
HERC4-214ENST00000513996 RFX7Q2KHR2 1363 aa10.7□□□□□ -0.7
HERC4-214ENST00000513996 RPAP1Q9BWH6 1393 aaPredicted RBP10.7□□□□□ -0.7
HERC4-214ENST00000513996 HAX1O00165 279 aa10.7□□□□□ -0.7
HERC4-214ENST00000513996 APBB1O00213 710 aa10.7□□□□□ -0.7
HERC4-214ENST00000513996 ENTPD3O75355 529 aa10.7□□□□□ -0.7
HERC4-214ENST00000513996 LDHCP07864 332 aa10.7□□□□□ -0.7
HERC4-214ENST00000513996 INHBEP58166 350 aa10.7□□□□□ -0.7
HERC4-214ENST00000513996 SREBF2Q12772 1141 aa10.7□□□□□ -0.7
HERC4-214ENST00000513996 ADGRA1Q86SQ6 560 aa10.7□□□□□ -0.7
HERC4-214ENST00000513996 AACSQ86V21 672 aa10.7□□□□□ -0.7
HERC4-214ENST00000513996 SLF2Q8IX21 1173 aa10.7□□□□□ -0.7
HERC4-214ENST00000513996 BRI3BPQ8WY22 251 aa10.7□□□□□ -0.7
HERC4-214ENST00000513996 ABHD8Q96I13 439 aa10.7□□□□□ -0.7
HERC4-214ENST00000513996 MCOLN1Q9GZU1 580 aa10.7□□□□□ -0.7
HERC4-214ENST00000513996 ANTXR1Q9H6X2 564 aa10.7□□□□□ -0.7
HERC4-214ENST00000513996 ATRNL1Q5VV63 1379 aa10.69□□□□□ -0.7
HERC4-214ENST00000513996 SPDYE5A6NIY4 337 aa10.69□□□□□ -0.7
HERC4-214ENST00000513996 PHF20L1A8MW92 1017 aa10.69□□□□□ -0.7
HERC4-214ENST00000513996 GPR25O00155 361 aa10.69□□□□□ -0.7
HERC4-214ENST00000513996 MAP3K10Q02779 954 aa10.69□□□□□ -0.7
HERC4-214ENST00000513996 PICALMQ13492 652 aa10.69□□□□□ -0.7
HERC4-214ENST00000513996 DGKZQ13574 1117 aa10.69□□□□□ -0.7
HERC4-214ENST00000513996 HSP90AB4PQ58FF6 505 aa10.69□□□□□ -0.7
HERC4-214ENST00000513996 DCAF15Q66K64 600 aa10.69□□□□□ -0.7
HERC4-214ENST00000513996 ERC1Q8IUD2 1116 aa10.69□□□□□ -0.7
HERC4-214ENST00000513996 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.69□□□□□ -0.7
HERC4-214ENST00000513996 ZNF296Q8WUU4 475 aaPredicted RBP10.69□□□□□ -0.7
HERC4-214ENST00000513996 OTUD5Q96G74 571 aa10.69□□□□□ -0.7
HERC4-214ENST00000513996 YTHDC1Q96MU7 727 aaKnown RBP10.69□□□□□ -0.7
HERC4-214ENST00000513996 CFHR5Q9BXR6 569 aa10.69□□□□□ -0.7
HERC4-214ENST00000513996 ZNF341Q9BYN7 854 aa10.69□□□□□ -0.7
HERC4-214ENST00000513996 CSADQ9Y600 493 aa10.69□□□□□ -0.7
HERC4-214ENST00000513996 IRF6O14896 467 aa10.68□□□□□ -0.7
HERC4-214ENST00000513996 HMMRO75330 724 aa10.68□□□□□ -0.7
HERC4-214ENST00000513996 MNX1P50219 401 aaPredicted RBP10.68□□□□□ -0.7
HERC4-214ENST00000513996 PPP4CP60510 307 aa10.68□□□□□ -0.7
HERC4-214ENST00000513996 GSTO1P78417 241 aa10.68□□□□□ -0.7
HERC4-214ENST00000513996 NAA16Q6N069 864 aaPredicted RBP10.68□□□□□ -0.7
HERC4-214ENST00000513996 ERO1BQ86YB8 467 aa10.68□□□□□ -0.7
HERC4-214ENST00000513996 SH3RF3Q8TEJ3 882 aaPredicted RBP10.68□□□□□ -0.7
HERC4-214ENST00000513996 HOOK2Q96ED9 719 aa10.68□□□□□ -0.7
HERC4-214ENST00000513996 KIF1BPQ96EK5 621 aa10.68□□□□□ -0.7
HERC4-214ENST00000513996 BCL11AQ9H165 835 aa10.68□□□□□ -0.7
HERC4-214ENST00000513996 OTOFQ9HC10 1997 aa10.68□□□□□ -0.7
HERC4-214ENST00000513996 RAB11FIP3O75154 756 aa10.67□□□□□ -0.7
HERC4-214ENST00000513996 GTF2A2P52657 109 aa10.67□□□□□ -0.7
HERC4-214ENST00000513996 DYNLL1P63167 89 aaKnown RBP10.67□□□□□ -0.7
HERC4-214ENST00000513996 CAP1Q01518 475 aa10.67□□□□□ -0.7
HERC4-214ENST00000513996 NOM1Q5C9Z4 860 aaKnown RBP10.67□□□□□ -0.7
HERC4-214ENST00000513996 ZSCAN29Q8IWY8 852 aaPredicted RBP10.67□□□□□ -0.7
HERC4-214ENST00000513996 FAM43AQ8N2R8 423 aa10.67□□□□□ -0.7
HERC4-214ENST00000513996 CHMP4BQ9H444 224 aaKnown RBP10.67□□□□□ -0.7
HERC4-214ENST00000513996 AATFQ9NY61 560 aaKnown RBP eCLIP10.67□□□□□ -0.7
HERC4-214ENST00000513996 AK9Q5TCS8 1911 aa10.66□□□□□ -0.7
HERC4-214ENST00000513996 MYO5AQ9Y4I1 1855 aaKnown RBP10.66□□□□□ -0.7
HERC4-214ENST00000513996 CCL15-CCL14A0A0B4J2E2 113 aa10.66□□□□□ -0.7
HERC4-214ENST00000513996 FAM196BA6NMK8 535 aa10.66□□□□□ -0.7
HERC4-214ENST00000513996 SMARCA5O60264 1052 aaPredicted RBP10.66□□□□□ -0.7
HERC4-214ENST00000513996 MAP4K4O95819 1239 aaPredicted RBP10.66□□□□□ -0.7
HERC4-214ENST00000513996 ALDH1A1P00352 501 aa10.66□□□□□ -0.7
HERC4-214ENST00000513996 CYP7A1P22680 504 aa10.66□□□□□ -0.7
HERC4-214ENST00000513996 CRHR2Q13324 411 aa10.66□□□□□ -0.7
HERC4-214ENST00000513996 PPIL2Q13356 520 aa10.66□□□□□ -0.7
HERC4-214ENST00000513996 RRP1BQ14684 758 aaKnown RBP10.66□□□□□ -0.7
HERC4-214ENST00000513996 CCL15Q16663 113 aa10.66□□□□□ -0.7
HERC4-214ENST00000513996 NOL9Q5SY16 702 aaKnown RBP10.66□□□□□ -0.7
HERC4-214ENST00000513996 TEX11Q8IYF3 940 aa10.66□□□□□ -0.7
HERC4-214ENST00000513996 CLASRPQ8N2M8 674 aaKnown RBP10.66□□□□□ -0.7
HERC4-214ENST00000513996 EDC3Q96F86 508 aaKnown RBP10.66□□□□□ -0.7
HERC4-214ENST00000513996 OSBPL5Q9H0X9 879 aaPredicted RBP10.66□□□□□ -0.7
HERC4-214ENST00000513996 PCDHB15Q9Y5E8 787 aa10.66□□□□□ -0.7
HERC4-214ENST00000513996 BTBD19C9JJ37 291 aa10.65□□□□□ -0.7
HERC4-214ENST00000513996 TBC1D12O60347 775 aa10.65□□□□□ -0.7
HERC4-214ENST00000513996 FKTNO75072 461 aa10.65□□□□□ -0.7
HERC4-214ENST00000513996 IDH1O75874 414 aaKnown RBP10.65□□□□□ -0.7
HERC4-214ENST00000513996 IFIT2P09913 472 aaKnown RBP10.65□□□□□ -0.7
HERC4-214ENST00000513996 RRP1P56182 461 aaKnown RBP10.65□□□□□ -0.7
HERC4-214ENST00000513996 PPATQ06203 517 aa10.65□□□□□ -0.7
HERC4-214ENST00000513996 MOGSQ13724 837 aa10.65□□□□□ -0.7
HERC4-214ENST00000513996 CTU1Q7Z7A3 348 aaKnown RBP10.65□□□□□ -0.7
HERC4-214ENST00000513996 MAGEB6Q8N7X4 407 aa10.65□□□□□ -0.7
HERC4-214ENST00000513996 SP7Q8TDD2 431 aaPredicted RBP10.65□□□□□ -0.7
HERC4-214ENST00000513996 TGFBRAP1Q8WUH2 860 aa10.65□□□□□ -0.7
HERC4-214ENST00000513996 DCTPP1Q9H773 170 aa10.65□□□□□ -0.7
HERC4-214ENST00000513996 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.65□□□□□ -0.7
HERC4-214ENST00000513996 KCNH4Q9UQ05 1017 aa10.65□□□□□ -0.7
HERC4-214ENST00000513996 C19orf67A6NJJ6 358 aa10.64□□□□□ -0.71
HERC4-214ENST00000513996 CCDC85CA6NKD9 419 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms