RNA–Protein interactions for RNA: ENST00000513266.5

PTPN20-228, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-228ENST00000513266 ZHX2Q9Y6X8 837 aa12.3□□□□□ -0.44
PTPN20-228ENST00000513266 MRE11P49959 708 aa12.29□□□□□ -0.44
PTPN20-228ENST00000513266 RTP1P59025 263 aa12.29□□□□□ -0.44
PTPN20-228ENST00000513266 CACNB2Q08289 660 aaPredicted RBP12.29□□□□□ -0.44
PTPN20-228ENST00000513266 PDE3AQ14432 1141 aa12.29□□□□□ -0.44
PTPN20-228ENST00000513266 AKNAD1Q5T1N1 836 aa12.29□□□□□ -0.44
PTPN20-228ENST00000513266 APOBEC3HQ6NTF7 200 aaKnown RBP12.29□□□□□ -0.44
PTPN20-228ENST00000513266 UBE3BQ7Z3V4 1068 aa12.29□□□□□ -0.44
PTPN20-228ENST00000513266 IL27Q8NEV9 243 aa12.29□□□□□ -0.44
PTPN20-228ENST00000513266 P2RX7Q99572 595 aaKnown RBP12.29□□□□□ -0.44
PTPN20-228ENST00000513266 PLA2G12BQ9BX93 195 aa12.29□□□□□ -0.44
PTPN20-228ENST00000513266 ZNF576Q9H609 170 aa12.29□□□□□ -0.44
PTPN20-228ENST00000513266 MAP3K2Q9Y2U5 619 aa12.29□□□□□ -0.44
PTPN20-228ENST00000513266 LAS1LQ9Y4W2 734 aaKnown RBP12.29□□□□□ -0.44
PTPN20-228ENST00000513266 AFG3L2Q9Y4W6 797 aa12.29□□□□□ -0.44
PTPN20-228ENST00000513266 XIRP2A4UGR9 3374 aa12.28□□□□□ -0.44
PTPN20-228ENST00000513266 GBF1Q92538 1859 aa12.28□□□□□ -0.44
PTPN20-228ENST00000513266 H7C1W4 665 aa12.28□□□□□ -0.44
PTPN20-228ENST00000513266 CSF1RP07333 972 aa12.28□□□□□ -0.44
PTPN20-228ENST00000513266 BMP1P13497 986 aa12.28□□□□□ -0.44
PTPN20-228ENST00000513266 CYP2B6P20813 491 aa12.28□□□□□ -0.44
PTPN20-228ENST00000513266 DNAJB2P25686 324 aa12.28□□□□□ -0.44
PTPN20-228ENST00000513266 TMPOP42166 694 aaKnown RBP12.28□□□□□ -0.44
PTPN20-228ENST00000513266 CWF19L2Q2TBE0 894 aaKnown RBP12.28□□□□□ -0.44
PTPN20-228ENST00000513266 TMEM31Q5JXX7 168 aa12.28□□□□□ -0.44
PTPN20-228ENST00000513266 TEKT1Q969V4 418 aa12.28□□□□□ -0.44
PTPN20-228ENST00000513266 ZDHHC15Q96MV8 337 aa12.28□□□□□ -0.44
PTPN20-228ENST00000513266 C11orf16Q9NQ32 467 aa12.28□□□□□ -0.44
PTPN20-228ENST00000513266 MYH13Q9UKX3 1938 aa12.27□□□□□ -0.44
PTPN20-228ENST00000513266 PTPRAP18433 802 aa12.27□□□□□ -0.45
PTPN20-228ENST00000513266 GYG1P46976 350 aa12.27□□□□□ -0.45
PTPN20-228ENST00000513266 LMOD3Q0VAK6 560 aa12.27□□□□□ -0.45
PTPN20-228ENST00000513266 TREML2Q5T2D2 321 aa12.27□□□□□ -0.45
PTPN20-228ENST00000513266 RNPC3Q96LT9 517 aaKnown RBP12.27□□□□□ -0.45
PTPN20-228ENST00000513266 PNNQ9H307 717 aaKnown RBP12.27□□□□□ -0.45
PTPN20-228ENST00000513266 AGTPBP1Q9UPW5 1226 aa12.27□□□□□ -0.45
PTPN20-228ENST00000513266 ATAD5Q96QE3 1844 aa12.27□□□□□ -0.45
PTPN20-228ENST00000513266 CHD7Q9P2D1 2997 aa12.26□□□□□ -0.45
PTPN20-228ENST00000513266 NEURL1BA8MQ27 555 aa12.26□□□□□ -0.45
PTPN20-228ENST00000513266 PHF20L1A8MW92 1017 aa12.26□□□□□ -0.45
PTPN20-228ENST00000513266 EPHB4P54760 987 aa12.26□□□□□ -0.45
PTPN20-228ENST00000513266 CCDC85BQ15834 202 aaPredicted RBP12.26□□□□□ -0.45
PTPN20-228ENST00000513266 FAM151AQ8WW52 585 aa12.26□□□□□ -0.45
PTPN20-228ENST00000513266 GAS2L1Q99501 681 aaPredicted RBP12.26□□□□□ -0.45
PTPN20-228ENST00000513266 ATP11BQ9Y2G3 1177 aa12.26□□□□□ -0.45
PTPN20-228ENST00000513266 ANKRD18BA2A2Z9 1011 aa12.25□□□□□ -0.45
PTPN20-228ENST00000513266 XRCC5P13010 732 aaKnown RBP12.25□□□□□ -0.45
PTPN20-228ENST00000513266 CASP7P55210 303 aa12.25□□□□□ -0.45
PTPN20-228ENST00000513266 TCP10Q12799 353 aa12.25□□□□□ -0.45
PTPN20-228ENST00000513266 ADGRE1Q14246 886 aa12.25□□□□□ -0.45
PTPN20-228ENST00000513266 SH3RF1Q7Z6J0 888 aa12.25□□□□□ -0.45
PTPN20-228ENST00000513266 SCYL3Q8IZE3 742 aa12.25□□□□□ -0.45
PTPN20-228ENST00000513266 FAM84BQ96KN1 310 aaPredicted RBP12.25□□□□□ -0.45
PTPN20-228ENST00000513266 PRDM5Q9NQX1 630 aaPredicted RBP12.25□□□□□ -0.45
PTPN20-228ENST00000513266 DAGLAQ9Y4D2 1042 aa12.25□□□□□ -0.45
PTPN20-228ENST00000513266 ATRNL1Q5VV63 1379 aa12.25□□□□□ -0.45
PTPN20-228ENST00000513266 TRIM43BA6NCK2 446 aa12.24□□□□□ -0.45
PTPN20-228ENST00000513266 FAM86C2PA6NEL3 165 aa12.24□□□□□ -0.45
PTPN20-228ENST00000513266 TRIM75PA6NK02 468 aa12.24□□□□□ -0.45
PTPN20-228ENST00000513266 LRRC37A2A6NM11 1700 aa12.24□□□□□ -0.45
PTPN20-228ENST00000513266 PLIN1O60240 522 aa12.24□□□□□ -0.45
PTPN20-228ENST00000513266 GPR37L1O60883 481 aa12.24□□□□□ -0.45
PTPN20-228ENST00000513266 DDX58O95786 925 aaKnown RBP12.24□□□□□ -0.45
PTPN20-228ENST00000513266 ZKSCAN1P17029 563 aaPredicted RBP12.24□□□□□ -0.45
PTPN20-228ENST00000513266 HIBADHP31937 336 aaKnown RBP12.24□□□□□ -0.45
PTPN20-228ENST00000513266 GCLCP48506 637 aaPredicted RBP12.24□□□□□ -0.45
PTPN20-228ENST00000513266 CCL14Q16627 93 aa12.24□□□□□ -0.45
PTPN20-228ENST00000513266 TRIM43Q96BQ3 446 aaPredicted RBP12.24□□□□□ -0.45
PTPN20-228ENST00000513266 TIFAQ96CG3 184 aa12.24□□□□□ -0.45
PTPN20-228ENST00000513266 MRIQ9BWK5 157 aa12.24□□□□□ -0.45
PTPN20-228ENST00000513266 PRDM12Q9H4Q4 367 aa12.24□□□□□ -0.45
PTPN20-228ENST00000513266 PDLIM7Q9NR12 457 aa12.24□□□□□ -0.45
PTPN20-228ENST00000513266 PICK1Q9NRD5 415 aa12.24□□□□□ -0.45
PTPN20-228ENST00000513266 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.24□□□□□ -0.45
PTPN20-228ENST00000513266 PNMA3Q9UL41 463 aa12.24□□□□□ -0.45
PTPN20-228ENST00000513266 IQSEC3Q9UPP2 1182 aaPredicted RBP12.24□□□□□ -0.45
PTPN20-228ENST00000513266 PI4KAP2A4QPH2 592 aa12.23□□□□□ -0.45
PTPN20-228ENST00000513266 ITGB8P26012 769 aa12.23□□□□□ -0.45
PTPN20-228ENST00000513266 TFF2Q03403 129 aa12.23□□□□□ -0.45
PTPN20-228ENST00000513266 NFIAQ12857 509 aa12.23□□□□□ -0.45
PTPN20-228ENST00000513266 KSR2Q6VAB6 950 aa12.23□□□□□ -0.45
PTPN20-228ENST00000513266 CCDC84Q86UT8 332 aaPredicted RBP12.23□□□□□ -0.45
PTPN20-228ENST00000513266 PI4KAP1Q8N8J0 262 aa12.23□□□□□ -0.45
PTPN20-228ENST00000513266 KHSRPQ92945 711 aaKnown RBP eCLIP12.23□□□□□ -0.45
PTPN20-228ENST00000513266 NUDT12Q9BQG2 462 aa12.23□□□□□ -0.45
PTPN20-228ENST00000513266 CXXC1Q9P0U4 656 aaPredicted RBP12.23□□□□□ -0.45
PTPN20-228ENST00000513266 TRIM35Q9UPQ4 493 aa12.23□□□□□ -0.45
PTPN20-228ENST00000513266 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.22□□□□□ -0.45
PTPN20-228ENST00000513266 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.22□□□□□ -0.45
PTPN20-228ENST00000513266 DNM1LO00429 736 aa12.22□□□□□ -0.45
PTPN20-228ENST00000513266 KCNQ1P51787 676 aa12.22□□□□□ -0.45
PTPN20-228ENST00000513266 CHAF1AQ13111 956 aaPredicted RBP12.22□□□□□ -0.45
PTPN20-228ENST00000513266 TRMT44Q8IYL2 757 aaKnown RBP12.22□□□□□ -0.45
PTPN20-228ENST00000513266 USP6NLQ92738 828 aa12.22□□□□□ -0.45
PTPN20-228ENST00000513266 MORF4L1Q9UBU8 362 aa12.22□□□□□ -0.45
PTPN20-228ENST00000513266 FAM198AQ9UFP1 575 aa12.22□□□□□ -0.45
PTPN20-228ENST00000513266 WDFY4Q6ZS81 3184 aa12.22□□□□□ -0.45
PTPN20-228ENST00000513266 ZDBF2Q9HCK1 2354 aa12.21□□□□□ -0.45
PTPN20-228ENST00000513266 PRRC2BQ5JSZ5 2229 aaKnown RBP12.21□□□□□ -0.45
PTPN20-228ENST00000513266 PEX10O60683 326 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms