RNA–Protein interactions for RNA: ENST00000512070.6

TRIO-218, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 8,907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-218ENST00000512070 TMEM110-MUSTN1A8MSY1 372 aa16.13■□□□□ 0.17
TRIO-218ENST00000512070 PHLDB3Q6NSJ2 640 aa16.13■□□□□ 0.17
TRIO-218ENST00000512070 KRBA2Q6ZNG9 492 aa16.13■□□□□ 0.17
TRIO-218ENST00000512070 SLC9C2Q5TAH2 1124 aa16.13■□□□□ 0.17
TRIO-218ENST00000512070 MUM1L1Q5H9M0 696 aa16.13■□□□□ 0.17
TRIO-218ENST00000512070 NOC4LQ9BVI4 516 aaKnown RBP16.13■□□□□ 0.17
TRIO-218ENST00000512070 CCDC51Q96ER9 411 aa16.13■□□□□ 0.17
TRIO-218ENST00000512070 ZRANB1Q9UGI0 708 aa16.13■□□□□ 0.17
TRIO-218ENST00000512070 RNF113AO15541 343 aaKnown RBP16.12■□□□□ 0.17
TRIO-218ENST00000512070 DEXIO95424 95 aa16.12■□□□□ 0.17
TRIO-218ENST00000512070 HAUS7Q99871 368 aa16.12■□□□□ 0.17
TRIO-218ENST00000512070 DMRT2Q9Y5R5 561 aa16.12■□□□□ 0.17
TRIO-218ENST00000512070 CADPS2Q86UW7 1296 aa16.12■□□□□ 0.17
TRIO-218ENST00000512070 TEKT1Q969V4 418 aa16.12■□□□□ 0.17
TRIO-218ENST00000512070 SYT10Q6XYQ8 523 aa16.12■□□□□ 0.17
TRIO-218ENST00000512070 ARHGEF2Q92974 986 aaKnown RBP16.12■□□□□ 0.17
TRIO-218ENST00000512070 CLNS1AP54105 237 aaKnown RBP16.11■□□□□ 0.17
TRIO-218ENST00000512070 YWHAEP62258 255 aaKnown RBP16.11■□□□□ 0.17
TRIO-218ENST00000512070 BRDTQ58F21 947 aaPredicted RBP16.11■□□□□ 0.17
TRIO-218ENST00000512070 SLC8A1P32418 973 aa16.11■□□□□ 0.17
TRIO-218ENST00000512070 PHBP35232 272 aa16.11■□□□□ 0.17
TRIO-218ENST00000512070 TBC1D8BQ0IIM8 1120 aa16.11■□□□□ 0.17
TRIO-218ENST00000512070 PPP4R1Q8TF05 950 aa16.11■□□□□ 0.17
TRIO-218ENST00000512070 ZFP91Q96JP5 570 aaPredicted RBP16.11■□□□□ 0.17
TRIO-218ENST00000512070 LARSQ9P2J5 1176 aaKnown RBP16.11■□□□□ 0.17
TRIO-218ENST00000512070 CD109Q6YHK3 1445 aa16.11■□□□□ 0.17
TRIO-218ENST00000512070 IWS1Q96ST2 819 aa16.11■□□□□ 0.17
TRIO-218ENST00000512070 PARP1P09874 1014 aaKnown RBP16.11■□□□□ 0.17
TRIO-218ENST00000512070 NSMCE1Q8WV22 266 aa16.11■□□□□ 0.17
TRIO-218ENST00000512070 ZBTB3Q9H5J0 574 aa16.11■□□□□ 0.17
TRIO-218ENST00000512070 RAPGEF6Q8TEU7 1601 aa16.11■□□□□ 0.17
TRIO-218ENST00000512070 MCM7P33993 719 aa16.11■□□□□ 0.17
TRIO-218ENST00000512070 VSIG1Q86XK7 387 aa16.11■□□□□ 0.17
TRIO-218ENST00000512070 LINS1Q8NG48 757 aa16.11■□□□□ 0.17
TRIO-218ENST00000512070 HOOK2Q96ED9 719 aa16.11■□□□□ 0.17
TRIO-218ENST00000512070 PPIP5K1Q6PFW1 1433 aa16.11■□□□□ 0.17
TRIO-218ENST00000512070 ARHGEF12Q9NZN5 1544 aa16.11■□□□□ 0.17
TRIO-218ENST00000512070 DCAF17Q5H9S7 520 aaPredicted RBP16.1■□□□□ 0.17
TRIO-218ENST00000512070 CREB3L3Q68CJ9 461 aa16.1■□□□□ 0.17
TRIO-218ENST00000512070 HAUS1Q96CS2 278 aa16.1■□□□□ 0.17
TRIO-218ENST00000512070 CABS1Q96KC9 395 aa16.1■□□□□ 0.17
TRIO-218ENST00000512070 TRAF5O00463 557 aa16.1■□□□□ 0.17
TRIO-218ENST00000512070 HOXA7P31268 230 aaPredicted RBP16.1■□□□□ 0.17
TRIO-218ENST00000512070 TNNI2P48788 182 aa16.1■□□□□ 0.17
TRIO-218ENST00000512070 EVI5O60447 810 aa16.1■□□□□ 0.17
TRIO-218ENST00000512070 RNF40O75150 1001 aa16.1■□□□□ 0.17
TRIO-218ENST00000512070 ANKRD20A3Q5VUR7 823 aa16.1■□□□□ 0.17
TRIO-218ENST00000512070 SEPT14Q6ZU15 432 aa16.1■□□□□ 0.17
TRIO-218ENST00000512070 SECISBP2LQ93073 1101 aaKnown RBP16.1■□□□□ 0.17
TRIO-218ENST00000512070 IBTKQ9P2D0 1353 aaPredicted RBP16.1■□□□□ 0.17
TRIO-218ENST00000512070 GPTP24298 496 aa16.1■□□□□ 0.17
TRIO-218ENST00000512070 HPDP32754 393 aaPredicted RBP16.1■□□□□ 0.17
TRIO-218ENST00000512070 BRD3Q15059 726 aa16.1■□□□□ 0.17
TRIO-218ENST00000512070 CUTAO60888 179 aa16.1■□□□□ 0.17
TRIO-218ENST00000512070 MCTP2Q6DN12 878 aa16.1■□□□□ 0.17
TRIO-218ENST00000512070 ASIC2Q16515 512 aa16.1■□□□□ 0.17
TRIO-218ENST00000512070 MIS12Q9H081 205 aa16.1■□□□□ 0.17
TRIO-218ENST00000512070 TNFAIP3P21580 790 aa16.1■□□□□ 0.17
TRIO-218ENST00000512070 RFC1P35251 1148 aaPredicted RBP16.1■□□□□ 0.17
TRIO-218ENST00000512070 BABAM1Q9NWV8 329 aa16.1■□□□□ 0.17
TRIO-218ENST00000512070 TRIM37O94972 964 aa16.09■□□□□ 0.17
TRIO-218ENST00000512070 NECAB1Q8N987 351 aa16.09■□□□□ 0.17
TRIO-218ENST00000512070 DCTPP1Q9H773 170 aa16.09■□□□□ 0.17
TRIO-218ENST00000512070 HOMER3Q9NSC5 361 aa16.09■□□□□ 0.17
TRIO-218ENST00000512070 CFAP43Q8NDM7 1665 aa16.09■□□□□ 0.17
TRIO-218ENST00000512070 GSDMBQ8TAX9 411 aa16.09■□□□□ 0.17
TRIO-218ENST00000512070 GJC1P36383 396 aa16.09■□□□□ 0.17
TRIO-218ENST00000512070 HHATQ5VTY9 493 aa16.09■□□□□ 0.17
TRIO-218ENST00000512070 PTPDC1A2A3K4 754 aa16.09■□□□□ 0.17
TRIO-218ENST00000512070 ARHGAP4P98171 946 aa16.09■□□□□ 0.17
TRIO-218ENST00000512070 RAPGEF1Q13905 1077 aa16.09■□□□□ 0.17
TRIO-218ENST00000512070 MYRIPQ8NFW9 859 aa16.09■□□□□ 0.17
TRIO-218ENST00000512070 NME9Q86XW9 330 aa16.09■□□□□ 0.17
TRIO-218ENST00000512070 MED4Q9NPJ6 270 aa16.09■□□□□ 0.17
TRIO-218ENST00000512070 MYCNP04198 464 aaPredicted RBP16.09■□□□□ 0.17
TRIO-218ENST00000512070 TTC36A6NLP5 189 aa16.09■□□□□ 0.17
TRIO-218ENST00000512070 P4HA1P13674 534 aa16.09■□□□□ 0.17
TRIO-218ENST00000512070 CUL4BQ13620 913 aa16.09■□□□□ 0.17
TRIO-218ENST00000512070 HSP90AA5PQ58FG0 334 aa16.09■□□□□ 0.17
TRIO-218ENST00000512070 RUNDC3BQ96NL0 473 aa16.09■□□□□ 0.17
TRIO-218ENST00000512070 POLR3AO14802 1390 aaPredicted RBP16.09■□□□□ 0.17
TRIO-218ENST00000512070 SMIM23A6NLE4 172 aa16.08■□□□□ 0.17
TRIO-218ENST00000512070 ZNF131P52739 623 aa16.08■□□□□ 0.17
TRIO-218ENST00000512070 TTC6Q86TZ1 520 aa16.08■□□□□ 0.17
TRIO-218ENST00000512070 TROVE2P10155 538 aaKnown RBP eCLIP16.08■□□□□ 0.16
TRIO-218ENST00000512070 CCDC89Q8N998 374 aa16.08■□□□□ 0.16
TRIO-218ENST00000512070 EYA3Q99504 573 aa16.08■□□□□ 0.16
TRIO-218ENST00000512070 SNRKQ9NRH2 765 aa16.08■□□□□ 0.16
TRIO-218ENST00000512070 TYW1Q9NV66 732 aaKnown RBP16.08■□□□□ 0.16
TRIO-218ENST00000512070 KDM5BQ9UGL1 1544 aa16.08■□□□□ 0.16
TRIO-218ENST00000512070 KRT5P13647 590 aa16.08■□□□□ 0.16
TRIO-218ENST00000512070 PIK3C2GO75747 1445 aa16.08■□□□□ 0.16
TRIO-218ENST00000512070 PAK1Q13153 545 aa16.08■□□□□ 0.16
TRIO-218ENST00000512070 CCDC170Q8IYT3 715 aa16.08■□□□□ 0.16
TRIO-218ENST00000512070 GRK7Q8WTQ7 553 aa16.08■□□□□ 0.16
TRIO-218ENST00000512070 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.08■□□□□ 0.16
TRIO-218ENST00000512070 AK2P54819 239 aa16.07■□□□□ 0.16
TRIO-218ENST00000512070 TRIM58Q8NG06 486 aa16.07■□□□□ 0.16
TRIO-218ENST00000512070 PPP1R12CQ9BZL4 782 aa16.07■□□□□ 0.16
TRIO-218ENST00000512070 STRN3Q13033 797 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms