RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 ATP5JP18859 108 aa19.68■□□□□ 0.74
PDLIM5-216ENST00000511767 CNKSR2Q8WXI2 1034 aa19.68■□□□□ 0.74
PDLIM5-216ENST00000511767 TESPA1A2RU30 521 aaPredicted RBP19.67■□□□□ 0.74
PDLIM5-216ENST00000511767 IDH1O75874 414 aaKnown RBP19.67■□□□□ 0.74
PDLIM5-216ENST00000511767 CYP7A1P22680 504 aa19.67■□□□□ 0.74
PDLIM5-216ENST00000511767 SH3RF3Q8TEJ3 882 aaPredicted RBP19.67■□□□□ 0.74
PDLIM5-216ENST00000511767 OPTNQ96CV9 577 aa19.67■□□□□ 0.74
PDLIM5-216ENST00000511767 MS4A4AQ96JQ5 239 aa19.67■□□□□ 0.74
PDLIM5-216ENST00000511767 WRNIP1Q96S55 665 aa19.67■□□□□ 0.74
PDLIM5-216ENST00000511767 AATFQ9NY61 560 aaKnown RBP eCLIP19.67■□□□□ 0.74
PDLIM5-216ENST00000511767 CSADQ9Y600 493 aa19.67■□□□□ 0.74
PDLIM5-216ENST00000511767 PHF20L1A8MW92 1017 aa19.66■□□□□ 0.74
PDLIM5-216ENST00000511767 INPP5BP32019 993 aa19.66■□□□□ 0.74
PDLIM5-216ENST00000511767 SREBF2Q12772 1141 aa19.66■□□□□ 0.74
PDLIM5-216ENST00000511767 MAP3K12Q12852 859 aa19.66■□□□□ 0.74
PDLIM5-216ENST00000511767 PICALMQ13492 652 aa19.66■□□□□ 0.74
PDLIM5-216ENST00000511767 PTPN18Q99952 460 aa19.66■□□□□ 0.74
PDLIM5-216ENST00000511767 SNCAIPQ9Y6H5 919 aa19.66■□□□□ 0.74
PDLIM5-216ENST00000511767 RFX7Q2KHR2 1363 aa19.66■□□□□ 0.74
PDLIM5-216ENST00000511767 SLURP2P0DP57 97 aa19.65■□□□□ 0.74
PDLIM5-216ENST00000511767 TMED8Q6PL24 325 aaPredicted RBP19.65■□□□□ 0.74
PDLIM5-216ENST00000511767 ERO1BQ86YB8 467 aa19.65■□□□□ 0.74
PDLIM5-216ENST00000511767 ZSCAN29Q8IWY8 852 aaPredicted RBP19.65■□□□□ 0.74
PDLIM5-216ENST00000511767 TEX11Q8IYF3 940 aa19.65■□□□□ 0.74
PDLIM5-216ENST00000511767 TNS4Q8IZW8 715 aa19.65■□□□□ 0.74
PDLIM5-216ENST00000511767 MAGEB6Q8N7X4 407 aa19.65■□□□□ 0.74
PDLIM5-216ENST00000511767 BOLA2Q9H3K6 86 aa19.65■□□□□ 0.74
PDLIM5-216ENST00000511767 SPDYE5A6NIY4 337 aa19.64■□□□□ 0.73
PDLIM5-216ENST00000511767 TBC1D12O60347 775 aa19.64■□□□□ 0.73
PDLIM5-216ENST00000511767 TBC1D8O95759 1140 aa19.64■□□□□ 0.73
PDLIM5-216ENST00000511767 PLCG2P16885 1265 aa19.64■□□□□ 0.73
PDLIM5-216ENST00000511767 DYNLL1P63167 89 aaKnown RBP19.64■□□□□ 0.73
PDLIM5-216ENST00000511767 TTF1Q15361 905 aaPredicted RBP19.64■□□□□ 0.73
PDLIM5-216ENST00000511767 IFFO2Q5TF58 517 aa19.64■□□□□ 0.73
PDLIM5-216ENST00000511767 IFNL1Q8IU54 200 aa19.64■□□□□ 0.73
PDLIM5-216ENST00000511767 NOL10Q9BSC4 688 aaKnown RBP19.64■□□□□ 0.73
PDLIM5-216ENST00000511767 R3HDMLQ9H3Y0 253 aa19.64■□□□□ 0.73
PDLIM5-216ENST00000511767 ATRNL1Q5VV63 1379 aa19.64■□□□□ 0.73
PDLIM5-216ENST00000511767 TGFBRAP1Q8WUH2 860 aa19.63■□□□□ 0.73
PDLIM5-216ENST00000511767 EDC3Q96F86 508 aaKnown RBP19.63■□□□□ 0.73
PDLIM5-216ENST00000511767 HAUS7Q99871 368 aa19.63■□□□□ 0.73
PDLIM5-216ENST00000511767 CFHR5Q9BXR6 569 aa19.63■□□□□ 0.73
PDLIM5-216ENST00000511767 OSBPL5Q9H0X9 879 aaPredicted RBP19.63■□□□□ 0.73
PDLIM5-216ENST00000511767 AK9Q5TCS8 1911 aa19.63■□□□□ 0.73
PDLIM5-216ENST00000511767 IGF2BP3O00425 579 aaKnown RBP eCLIP19.62■□□□□ 0.73
PDLIM5-216ENST00000511767 GOLIM4O00461 696 aa19.62■□□□□ 0.73
PDLIM5-216ENST00000511767 NOL9Q5SY16 702 aaKnown RBP19.62■□□□□ 0.73
PDLIM5-216ENST00000511767 DNAJC2Q99543 621 aaKnown RBP19.62■□□□□ 0.73
PDLIM5-216ENST00000511767 SUPT16HQ9Y5B9 1047 aaKnown RBP19.62■□□□□ 0.73
PDLIM5-216ENST00000511767 CASP8AP2Q9UKL3 1982 aa19.62■□□□□ 0.73
PDLIM5-216ENST00000511767 MYO5AQ9Y4I1 1855 aaKnown RBP19.62■□□□□ 0.73
PDLIM5-216ENST00000511767 IRF6O14896 467 aa19.61■□□□□ 0.73
PDLIM5-216ENST00000511767 ALDH1A1P00352 501 aa19.61■□□□□ 0.73
PDLIM5-216ENST00000511767 GTF2A2P52657 109 aa19.61■□□□□ 0.73
PDLIM5-216ENST00000511767 PPATQ06203 517 aa19.61■□□□□ 0.73
PDLIM5-216ENST00000511767 AAMPQ13685 434 aa19.61■□□□□ 0.73
PDLIM5-216ENST00000511767 SLC9C2Q5TAH2 1124 aa19.61■□□□□ 0.73
PDLIM5-216ENST00000511767 OTUD5Q96G74 571 aa19.61■□□□□ 0.73
PDLIM5-216ENST00000511767 ECHDC1Q9NTX5 307 aa19.61■□□□□ 0.73
PDLIM5-216ENST00000511767 PAG1Q9NWQ8 432 aa19.61■□□□□ 0.73
PDLIM5-216ENST00000511767 PPIL2Q13356 520 aa19.6■□□□□ 0.73
PDLIM5-216ENST00000511767 FOXP4Q8IVH2 680 aaPredicted RBP19.6■□□□□ 0.73
PDLIM5-216ENST00000511767 MAPKAPK5Q8IW41 473 aa19.6■□□□□ 0.73
PDLIM5-216ENST00000511767 MIGA1Q8NAN2 632 aa19.6■□□□□ 0.73
PDLIM5-216ENST00000511767 BRI3BPQ8WY22 251 aa19.6■□□□□ 0.73
PDLIM5-216ENST00000511767 PI4KBQ9UBF8 816 aa19.6■□□□□ 0.73
PDLIM5-216ENST00000511767 TCRBV5S4A2TA0A5A2 114 aa19.59■□□□□ 0.73
PDLIM5-216ENST00000511767 CTNND1O60716 968 aaKnown RBP19.59■□□□□ 0.73
PDLIM5-216ENST00000511767 PDE6AP16499 860 aa19.59■□□□□ 0.73
PDLIM5-216ENST00000511767 HDAC1Q13547 482 aaPredicted RBP19.59■□□□□ 0.73
PDLIM5-216ENST00000511767 NOM1Q5C9Z4 860 aaKnown RBP19.59■□□□□ 0.73
PDLIM5-216ENST00000511767 OTUD7BQ6GQQ9 843 aa19.59■□□□□ 0.73
PDLIM5-216ENST00000511767 METTL16Q86W50 562 aaKnown RBP19.59■□□□□ 0.73
PDLIM5-216ENST00000511767 RIOK1Q9BRS2 568 aaKnown RBP19.59■□□□□ 0.73
PDLIM5-216ENST00000511767 DHX36Q9H2U1 1008 aaKnown RBP19.59■□□□□ 0.73
PDLIM5-216ENST00000511767 GPR25O00155 361 aa19.58■□□□□ 0.72
PDLIM5-216ENST00000511767 CERS3Q8IU89 383 aa19.58■□□□□ 0.72
PDLIM5-216ENST00000511767 EXOC6Q8TAG9 804 aa19.58■□□□□ 0.72
PDLIM5-216ENST00000511767 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.58■□□□□ 0.72
PDLIM5-216ENST00000511767 PALD1Q9ULE6 856 aa19.58■□□□□ 0.72
PDLIM5-216ENST00000511767 ZNF532Q9HCE3 1301 aa19.57■□□□□ 0.72
PDLIM5-216ENST00000511767 CCL15-CCL14A0A0B4J2E2 113 aa19.57■□□□□ 0.72
PDLIM5-216ENST00000511767 RRP1BQ14684 758 aaKnown RBP19.57■□□□□ 0.72
PDLIM5-216ENST00000511767 CCL15Q16663 113 aa19.57■□□□□ 0.72
PDLIM5-216ENST00000511767 SCYL3Q8IZE3 742 aa19.57■□□□□ 0.72
PDLIM5-216ENST00000511767 KCNH4Q9UQ05 1017 aa19.57■□□□□ 0.72
PDLIM5-216ENST00000511767 FAM196BA6NMK8 535 aa19.56■□□□□ 0.72
PDLIM5-216ENST00000511767 CETPP11597 493 aa19.56■□□□□ 0.72
PDLIM5-216ENST00000511767 PTPRAP18433 802 aa19.56■□□□□ 0.72
PDLIM5-216ENST00000511767 SNAPC2Q13487 334 aa19.56■□□□□ 0.72
PDLIM5-216ENST00000511767 SLFNL1Q499Z3 407 aa19.56■□□□□ 0.72
PDLIM5-216ENST00000511767 FAM43AQ8N2R8 423 aa19.56■□□□□ 0.72
PDLIM5-216ENST00000511767 ZNF296Q8WUU4 475 aaPredicted RBP19.56■□□□□ 0.72
PDLIM5-216ENST00000511767 ZHX2Q9Y6X8 837 aa19.56■□□□□ 0.72
PDLIM5-216ENST00000511767 FLT1P17948 1338 aa19.55■□□□□ 0.72
PDLIM5-216ENST00000511767 MAGEB6P1A0A0J9YX57 407 aa19.55■□□□□ 0.72
PDLIM5-216ENST00000511767 CXCL11O14625 94 aa19.55■□□□□ 0.72
PDLIM5-216ENST00000511767 ADD2P35612 726 aa19.55■□□□□ 0.72
PDLIM5-216ENST00000511767 ANKRD45Q5TZF3 282 aa19.55■□□□□ 0.72
PDLIM5-216ENST00000511767 OTUD7AQ8TE49 926 aaPredicted RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms