RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 HTR3BO95264 441 aa7.95□□□□□ -1.14
HMGB1P47-201ENST00000511281 POU4F3Q15319 338 aa7.95□□□□□ -1.14
HMGB1P47-201ENST00000511281 TMEM201Q5SNT2 666 aa7.95□□□□□ -1.14
HMGB1P47-201ENST00000511281 FBXW10Q5XX13 1052 aa7.95□□□□□ -1.14
HMGB1P47-201ENST00000511281 INTS3Q68E01 1043 aaKnown RBP7.95□□□□□ -1.14
HMGB1P47-201ENST00000511281 MAP4K3Q8IVH8 894 aa7.95□□□□□ -1.14
HMGB1P47-201ENST00000511281 KCNB2Q92953 911 aa7.95□□□□□ -1.14
HMGB1P47-201ENST00000511281 CORO1BQ9BR76 489 aa7.95□□□□□ -1.14
HMGB1P47-201ENST00000511281 CCDC86Q9H6F5 360 aaKnown RBP7.95□□□□□ -1.14
HMGB1P47-201ENST00000511281 JPH1Q9HDC5 661 aaPredicted RBP7.95□□□□□ -1.14
HMGB1P47-201ENST00000511281 SLC12A7Q9Y666 1083 aa7.95□□□□□ -1.14
HMGB1P47-201ENST00000511281 A0A1W2PQH9 124 aa7.94□□□□□ -1.14
HMGB1P47-201ENST00000511281 ALBP02768 609 aa7.94□□□□□ -1.14
HMGB1P47-201ENST00000511281 GUCY2CP25092 1073 aa7.94□□□□□ -1.14
HMGB1P47-201ENST00000511281 SRSF11Q05519 484 aaKnown RBP7.94□□□□□ -1.14
HMGB1P47-201ENST00000511281 WIPI1Q5MNZ9 446 aaPredicted RBP7.94□□□□□ -1.14
HMGB1P47-201ENST00000511281 CYFIP1Q7L576 1253 aa7.94□□□□□ -1.14
HMGB1P47-201ENST00000511281 HDXQ7Z353 690 aa7.94□□□□□ -1.14
HMGB1P47-201ENST00000511281 LILRB2Q8N423 598 aa7.94□□□□□ -1.14
HMGB1P47-201ENST00000511281 KLHL23Q8NBE8 558 aa7.94□□□□□ -1.14
HMGB1P47-201ENST00000511281 ST13P5Q8NFI4 369 aaPredicted RBP7.94□□□□□ -1.14
HMGB1P47-201ENST00000511281 SH3TC2Q8TF17 1288 aa7.94□□□□□ -1.14
HMGB1P47-201ENST00000511281 NUDT8Q8WV74 236 aa7.94□□□□□ -1.14
HMGB1P47-201ENST00000511281 DNAJC7Q99615 494 aa7.94□□□□□ -1.14
HMGB1P47-201ENST00000511281 LRRC4BQ9NT99 713 aa7.94□□□□□ -1.14
HMGB1P47-201ENST00000511281 TMEM260Q9NX78 707 aa7.94□□□□□ -1.14
HMGB1P47-201ENST00000511281 GMIPQ9P107 970 aa7.94□□□□□ -1.14
HMGB1P47-201ENST00000511281 PCDHA4Q9UN74 947 aa7.94□□□□□ -1.14
HMGB1P47-201ENST00000511281 LINC01387J3KSC0 135 aa7.93□□□□□ -1.14
HMGB1P47-201ENST00000511281 ZNF862O60290 1169 aa7.93□□□□□ -1.14
HMGB1P47-201ENST00000511281 GRIN3BO60391 1043 aa7.93□□□□□ -1.14
HMGB1P47-201ENST00000511281 CDK8P49336 464 aa7.93□□□□□ -1.14
HMGB1P47-201ENST00000511281 IFRD2Q12894 506 aaPredicted RBP7.93□□□□□ -1.14
HMGB1P47-201ENST00000511281 HP1BP3Q5SSJ5 553 aaPredicted RBP7.93□□□□□ -1.14
HMGB1P47-201ENST00000511281 CDCP2Q5VXM1 449 aa7.93□□□□□ -1.14
HMGB1P47-201ENST00000511281 LRFN4Q6PJG9 635 aa7.93□□□□□ -1.14
HMGB1P47-201ENST00000511281 MICAL1Q8TDZ2 1067 aa7.93□□□□□ -1.14
HMGB1P47-201ENST00000511281 PLPPR2Q96GM1 343 aa7.93□□□□□ -1.14
HMGB1P47-201ENST00000511281 ADAM30Q9UKF2 790 aa7.93□□□□□ -1.14
HMGB1P47-201ENST00000511281 PCDHGC5Q9Y5F6 944 aa7.93□□□□□ -1.14
HMGB1P47-201ENST00000511281 TNFRSF10CO14798 259 aa7.92□□□□□ -1.14
HMGB1P47-201ENST00000511281 LILRB5O75023 590 aa7.92□□□□□ -1.14
HMGB1P47-201ENST00000511281 GJB6O95452 261 aa7.92□□□□□ -1.14
HMGB1P47-201ENST00000511281 ECEL1O95672 775 aa7.92□□□□□ -1.14
HMGB1P47-201ENST00000511281 MAOBP27338 520 aa7.92□□□□□ -1.14
HMGB1P47-201ENST00000511281 RING1Q06587 406 aa7.92□□□□□ -1.14
HMGB1P47-201ENST00000511281 MLECQ14165 292 aa7.92□□□□□ -1.14
HMGB1P47-201ENST00000511281 INPP5AQ14642 412 aa7.92□□□□□ -1.14
HMGB1P47-201ENST00000511281 MSL1Q68DK7 614 aa7.92□□□□□ -1.14
HMGB1P47-201ENST00000511281 KIAA0907Q7Z7F0 614 aaPredicted RBP7.92□□□□□ -1.14
HMGB1P47-201ENST00000511281 TTC6Q86TZ1 520 aa7.92□□□□□ -1.14
HMGB1P47-201ENST00000511281 SLC7A3Q8WY07 619 aa7.92□□□□□ -1.14
HMGB1P47-201ENST00000511281 PRKAB1Q9Y478 270 aa7.92□□□□□ -1.14
HMGB1P47-201ENST00000511281 UPK3BL1B0FP48 263 aa7.91□□□□□ -1.14
HMGB1P47-201ENST00000511281 UPK3BL2E5RIL1 263 aa7.91□□□□□ -1.14
HMGB1P47-201ENST00000511281 CTSBP07858 339 aa7.91□□□□□ -1.14
HMGB1P47-201ENST00000511281 PDE4BQ07343 736 aa7.91□□□□□ -1.14
HMGB1P47-201ENST00000511281 SUZ12Q15022 739 aaKnown RBP7.91□□□□□ -1.14
HMGB1P47-201ENST00000511281 SETDB1Q15047 1291 aa7.91□□□□□ -1.14
HMGB1P47-201ENST00000511281 ZC3H12AQ5D1E8 599 aaKnown RBP7.91□□□□□ -1.14
HMGB1P47-201ENST00000511281 ARSHQ5FYA8 562 aa7.91□□□□□ -1.14
HMGB1P47-201ENST00000511281 RNFT1Q5M7Z0 435 aa7.91□□□□□ -1.14
HMGB1P47-201ENST00000511281 RUFY4Q6ZNE9 571 aa7.91□□□□□ -1.14
HMGB1P47-201ENST00000511281 WFDC8Q8IUA0 241 aa7.91□□□□□ -1.14
HMGB1P47-201ENST00000511281 ZSCAN1Q8NBB4 408 aa7.91□□□□□ -1.14
HMGB1P47-201ENST00000511281 APPBP2Q92624 585 aa7.91□□□□□ -1.14
HMGB1P47-201ENST00000511281 ACSBG1Q96GR2 724 aa7.91□□□□□ -1.14
HMGB1P47-201ENST00000511281 GPATCH3Q96I76 525 aa7.91□□□□□ -1.14
HMGB1P47-201ENST00000511281 ANTXR1Q9H6X2 564 aa7.91□□□□□ -1.14
HMGB1P47-201ENST00000511281 CNNM2Q9H8M5 875 aa7.91□□□□□ -1.14
HMGB1P47-201ENST00000511281 ST7Q9NRC1 585 aa7.91□□□□□ -1.14
HMGB1P47-201ENST00000511281 REV1Q9UBZ9 1251 aa7.91□□□□□ -1.14
HMGB1P47-201ENST00000511281 LOC100289279A0A1B0GTE1 492 aa7.9□□□□□ -1.14
HMGB1P47-201ENST00000511281 CDC45O75419 566 aa7.9□□□□□ -1.14
HMGB1P47-201ENST00000511281 NME1P15531 152 aaKnown RBP7.9□□□□□ -1.14
HMGB1P47-201ENST00000511281 C2orf27AQ580R0 203 aa7.9□□□□□ -1.14
HMGB1P47-201ENST00000511281 RNF187Q5TA31 235 aaPredicted RBP7.9□□□□□ -1.14
HMGB1P47-201ENST00000511281 LARP1BQ659C4 914 aaKnown RBP7.9□□□□□ -1.14
HMGB1P47-201ENST00000511281 C1orf229Q6ZS94 237 aaPredicted RBP7.9□□□□□ -1.14
HMGB1P47-201ENST00000511281 HOMER1Q86YM7 354 aa7.9□□□□□ -1.14
HMGB1P47-201ENST00000511281 FAM178BQ8IXR5 827 aa7.9□□□□□ -1.14
HMGB1P47-201ENST00000511281 ACDQ96AP0 544 aa7.9□□□□□ -1.14
HMGB1P47-201ENST00000511281 ATG4CQ96DT6 458 aa7.9□□□□□ -1.14
HMGB1P47-201ENST00000511281 KLHDC7BQ96G42 594 aa7.9□□□□□ -1.14
HMGB1P47-201ENST00000511281 COL25A1Q9BXS0 654 aaPredicted RBP7.9□□□□□ -1.14
HMGB1P47-201ENST00000511281 SLC22A31A6NKX4 558 aa7.89□□□□□ -1.15
HMGB1P47-201ENST00000511281 M0R082 166 aa7.89□□□□□ -1.15
HMGB1P47-201ENST00000511281 ACRP10323 421 aa7.89□□□□□ -1.15
HMGB1P47-201ENST00000511281 ERVK-24P63145 666 aa7.89□□□□□ -1.15
HMGB1P47-201ENST00000511281 COL9A3Q14050 684 aaPredicted RBP7.89□□□□□ -1.15
HMGB1P47-201ENST00000511281 PTPROQ16827 1216 aa7.89□□□□□ -1.15
HMGB1P47-201ENST00000511281 OVOS1Q6IE37 1185 aa7.89□□□□□ -1.15
HMGB1P47-201ENST00000511281 TXNDC11Q6PKC3 985 aa7.89□□□□□ -1.15
HMGB1P47-201ENST00000511281 DTWD1Q8N5C7 304 aa7.89□□□□□ -1.15
HMGB1P47-201ENST00000511281 ZNF417Q8TAU3 575 aa7.89□□□□□ -1.15
HMGB1P47-201ENST00000511281 DCAF11Q8TEB1 546 aa7.89□□□□□ -1.15
HMGB1P47-201ENST00000511281 THAP3Q8WTV1 239 aaPredicted RBP7.89□□□□□ -1.15
HMGB1P47-201ENST00000511281 ZNF587Q96SQ5 575 aaPredicted RBP7.89□□□□□ -1.15
HMGB1P47-201ENST00000511281 ZC3H12CQ9C0D7 883 aaKnown RBP7.89□□□□□ -1.15
HMGB1P47-201ENST00000511281 KANSL2Q9H9L4 492 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms