RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 SNCAIPQ9Y6H5 919 aa8.61□□□□□ -1.03
CHD1-206ENST00000511067 MSTNO14793 375 aa8.6□□□□□ -1.03
CHD1-206ENST00000511067 ZNF862O60290 1169 aa8.6□□□□□ -1.03
CHD1-206ENST00000511067 ALYREFQ86V81 257 aaKnown RBP8.6□□□□□ -1.03
CHD1-206ENST00000511067 DNAJC2Q99543 621 aaKnown RBP8.6□□□□□ -1.03
CHD1-206ENST00000511067 EHMT1Q9H9B1 1298 aa8.6□□□□□ -1.03
CHD1-206ENST00000511067 BRMS1Q9HCU9 246 aa8.6□□□□□ -1.03
CHD1-206ENST00000511067 SHROOM4Q9ULL8 1493 aa8.59□□□□□ -1.03
CHD1-206ENST00000511067 ATE1O95260 518 aa8.59□□□□□ -1.03
CHD1-206ENST00000511067 WIPI1Q5MNZ9 446 aaPredicted RBP8.59□□□□□ -1.03
CHD1-206ENST00000511067 NBPF6Q5VWK0 638 aa8.59□□□□□ -1.03
CHD1-206ENST00000511067 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.59□□□□□ -1.03
CHD1-206ENST00000511067 HDXQ7Z353 690 aa8.59□□□□□ -1.03
CHD1-206ENST00000511067 CPLX3Q8WVH0 158 aa8.59□□□□□ -1.03
CHD1-206ENST00000511067 NBPF4Q96M43 638 aa8.59□□□□□ -1.03
CHD1-206ENST00000511067 KCNK4Q9NYG8 393 aa8.59□□□□□ -1.03
CHD1-206ENST00000511067 ZNRF3Q9ULT6 936 aa8.59□□□□□ -1.03
CHD1-206ENST00000511067 PRR36Q9H6K5 1346 aa8.58□□□□□ -1.04
CHD1-206ENST00000511067 GFRA2O00451 464 aa8.58□□□□□ -1.04
CHD1-206ENST00000511067 SLFN14P0C7P3 912 aa8.58□□□□□ -1.04
CHD1-206ENST00000511067 SELPP16109 830 aa8.58□□□□□ -1.04
CHD1-206ENST00000511067 MCM4P33991 863 aa8.58□□□□□ -1.04
CHD1-206ENST00000511067 DUOXA2Q1HG44 320 aa8.58□□□□□ -1.04
CHD1-206ENST00000511067 CKAP2LQ8IYA6 745 aa8.58□□□□□ -1.04
CHD1-206ENST00000511067 OR6P1Q8NGX9 317 aa8.58□□□□□ -1.04
CHD1-206ENST00000511067 FERD3LQ96RJ6 166 aa8.58□□□□□ -1.04
CHD1-206ENST00000511067 PLVAPQ9BX97 442 aa8.58□□□□□ -1.04
CHD1-206ENST00000511067 ZNF408Q9H9D4 720 aa8.58□□□□□ -1.04
CHD1-206ENST00000511067 NOP53Q9NZM5 478 aaKnown RBP8.58□□□□□ -1.04
CHD1-206ENST00000511067 PCDHGC5Q9Y5F6 944 aa8.58□□□□□ -1.04
CHD1-206ENST00000511067 MEGF11A6BM72 1044 aa8.57□□□□□ -1.04
CHD1-206ENST00000511067 DDX3YO15523 660 aaKnown RBP8.57□□□□□ -1.04
CHD1-206ENST00000511067 AOC2O75106 756 aa8.57□□□□□ -1.04
CHD1-206ENST00000511067 ELNP15502 786 aa8.57□□□□□ -1.04
CHD1-206ENST00000511067 LIG1P18858 919 aa8.57□□□□□ -1.04
CHD1-206ENST00000511067 COL8A1P27658 744 aa8.57□□□□□ -1.04
CHD1-206ENST00000511067 TRIM28Q13263 835 aaKnown RBP8.57□□□□□ -1.04
CHD1-206ENST00000511067 EXOSC6Q5RKV6 272 aaKnown RBP8.57□□□□□ -1.04
CHD1-206ENST00000511067 LRFN4Q6PJG9 635 aa8.57□□□□□ -1.04
CHD1-206ENST00000511067 UBASH3BQ8TF42 649 aa8.57□□□□□ -1.04
CHD1-206ENST00000511067 PLPPR2Q96GM1 343 aa8.57□□□□□ -1.04
CHD1-206ENST00000511067 SHDQ96IW2 340 aa8.57□□□□□ -1.04
CHD1-206ENST00000511067 WDR18Q9BV38 432 aa8.57□□□□□ -1.04
CHD1-206ENST00000511067 PPT2Q9UMR5 302 aa8.57□□□□□ -1.04
CHD1-206ENST00000511067 POLR3KQ9Y2Y1 108 aaPredicted RBP8.57□□□□□ -1.04
CHD1-206ENST00000511067 KRBA1A5PL33 1030 aa8.56□□□□□ -1.04
CHD1-206ENST00000511067 DLGAP3O95886 979 aa8.56□□□□□ -1.04
CHD1-206ENST00000511067 EIF6P56537 245 aaKnown RBP8.56□□□□□ -1.04
CHD1-206ENST00000511067 ZC3H12AQ5D1E8 599 aaKnown RBP8.56□□□□□ -1.04
CHD1-206ENST00000511067 IGF2-ASQ6U949 168 aa8.56□□□□□ -1.04
CHD1-206ENST00000511067 CYFIP1Q7L576 1253 aa8.56□□□□□ -1.04
CHD1-206ENST00000511067 DPH6Q7L8W6 267 aa8.56□□□□□ -1.04
CHD1-206ENST00000511067 RBBP8NLQ8NC74 664 aaPredicted RBP8.56□□□□□ -1.04
CHD1-206ENST00000511067 ELMO3Q96BJ8 720 aa8.56□□□□□ -1.04
CHD1-206ENST00000511067 SPOCK3Q9BQ16 436 aa8.56□□□□□ -1.04
CHD1-206ENST00000511067 TMPRSS13Q9BYE2 586 aa8.56□□□□□ -1.04
CHD1-206ENST00000511067 MRPL18Q9H0U6 180 aaKnown RBP8.56□□□□□ -1.04
CHD1-206ENST00000511067 PRKAG3Q9UGI9 489 aa8.56□□□□□ -1.04
CHD1-206ENST00000511067 PCDHB14Q9Y5E9 798 aa8.56□□□□□ -1.04
CHD1-206ENST00000511067 GIPRP48546 466 aa8.55□□□□□ -1.04
CHD1-206ENST00000511067 ERVK-24P63145 666 aa8.55□□□□□ -1.04
CHD1-206ENST00000511067 CLCQ05315 142 aa8.55□□□□□ -1.04
CHD1-206ENST00000511067 INPP5AQ14642 412 aa8.55□□□□□ -1.04
CHD1-206ENST00000511067 LRRFIP1Q32MZ4 808 aaKnown RBP8.55□□□□□ -1.04
CHD1-206ENST00000511067 TNNI3KQ59H18 835 aa8.55□□□□□ -1.04
CHD1-206ENST00000511067 PRRT3Q5FWE3 981 aa8.55□□□□□ -1.04
CHD1-206ENST00000511067 CCDC81Q6ZN84 652 aa8.55□□□□□ -1.04
CHD1-206ENST00000511067 GK5Q6ZS86 529 aa8.55□□□□□ -1.04
CHD1-206ENST00000511067 WDR89Q96FK6 387 aaPredicted RBP8.55□□□□□ -1.04
CHD1-206ENST00000511067 CRBNQ96SW2 442 aa8.55□□□□□ -1.04
CHD1-206ENST00000511067 RUSC1Q9BVN2 902 aa8.55□□□□□ -1.04
CHD1-206ENST00000511067 LNPKQ9C0E8 428 aa8.55□□□□□ -1.04
CHD1-206ENST00000511067 RNF208Q9H0X6 261 aa8.55□□□□□ -1.04
CHD1-206ENST00000511067 SUGCTQ9HAC7 445 aa8.55□□□□□ -1.04
CHD1-206ENST00000511067 LOC105371045A0A1W2PR82 267 aa8.54□□□□□ -1.04
CHD1-206ENST00000511067 ITGB2P05107 769 aa8.54□□□□□ -1.04
CHD1-206ENST00000511067 CDK8P49336 464 aa8.54□□□□□ -1.04
CHD1-206ENST00000511067 ID3Q02535 119 aa8.54□□□□□ -1.04
CHD1-206ENST00000511067 RING1Q06587 406 aa8.54□□□□□ -1.04
CHD1-206ENST00000511067 PDE4BQ07343 736 aa8.54□□□□□ -1.04
CHD1-206ENST00000511067 MLECQ14165 292 aa8.54□□□□□ -1.04
CHD1-206ENST00000511067 SMG8Q8ND04 991 aaKnown RBP8.54□□□□□ -1.04
CHD1-206ENST00000511067 ANAPC16Q96DE5 110 aa8.54□□□□□ -1.04
CHD1-206ENST00000511067 RAD18Q9NS91 495 aa8.54□□□□□ -1.04
CHD1-206ENST00000511067 MEIS3P2A8K0S8 358 aa8.53□□□□□ -1.04
CHD1-206ENST00000511067 HTR3BO95264 441 aa8.53□□□□□ -1.04
CHD1-206ENST00000511067 WISP1O95388 367 aa8.53□□□□□ -1.04
CHD1-206ENST00000511067 ETFBP38117 255 aa8.53□□□□□ -1.04
CHD1-206ENST00000511067 KIAA1211Q6ZU35 1233 aa8.53□□□□□ -1.04
CHD1-206ENST00000511067 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.53□□□□□ -1.04
CHD1-206ENST00000511067 CYP4F12Q9HCS2 524 aa8.53□□□□□ -1.04
CHD1-206ENST00000511067 ADAM30Q9UKF2 790 aa8.53□□□□□ -1.04
CHD1-206ENST00000511067 MRVI1Q9Y6F6 885 aa8.53□□□□□ -1.04
CHD1-206ENST00000511067 TMPRSS2O15393 492 aa8.52□□□□□ -1.05
CHD1-206ENST00000511067 GRIN3BO60391 1043 aa8.52□□□□□ -1.05
CHD1-206ENST00000511067 TMEM201Q5SNT2 666 aa8.52□□□□□ -1.05
CHD1-206ENST00000511067 NUTM2GQ5VZR2 741 aa8.52□□□□□ -1.05
CHD1-206ENST00000511067 FBXW10Q5XX13 1052 aa8.52□□□□□ -1.05
CHD1-206ENST00000511067 ANKS3Q6ZW76 656 aa8.52□□□□□ -1.05
CHD1-206ENST00000511067 ACAD11Q709F0 780 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms