RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 FXR1P51114 621 aaKnown RBP eCLIP19.81■□□□□ 0.76
RAB40C-202ENST00000509637 RRP1BQ14684 758 aaKnown RBP19.81■□□□□ 0.76
RAB40C-202ENST00000509637 ARHGEF6Q15052 776 aa19.81■□□□□ 0.76
RAB40C-202ENST00000509637 FAM163AQ96GL9 167 aaPredicted RBP19.81■□□□□ 0.76
RAB40C-202ENST00000509637 XAGE2Q96GT9 111 aa19.81■□□□□ 0.76
RAB40C-202ENST00000509637 ZHX2Q9Y6X8 837 aa19.81■□□□□ 0.76
RAB40C-202ENST00000509637 PTPRFP10586 1907 aa19.8■□□□□ 0.76
RAB40C-202ENST00000509637 DOCK3Q8IZD9 2030 aa19.8■□□□□ 0.76
RAB40C-202ENST00000509637 A0A1B0GUL7 405 aa19.8■□□□□ 0.76
RAB40C-202ENST00000509637 FAM196BA6NMK8 535 aa19.8■□□□□ 0.76
RAB40C-202ENST00000509637 CXCL11O14625 94 aa19.8■□□□□ 0.76
RAB40C-202ENST00000509637 ENTPD3O75355 529 aa19.8■□□□□ 0.76
RAB40C-202ENST00000509637 UBE2Q1Q7Z7E8 422 aa19.8■□□□□ 0.76
RAB40C-202ENST00000509637 GCC1Q96CN9 775 aa19.8■□□□□ 0.76
RAB40C-202ENST00000509637 GNL3LQ9NVN8 582 aaKnown RBP19.8■□□□□ 0.76
RAB40C-202ENST00000509637 DOCK2Q92608 1830 aa19.8■□□□□ 0.76
RAB40C-202ENST00000509637 A0A0G2JLL6 359 aaPredicted RBP19.79■□□□□ 0.76
RAB40C-202ENST00000509637 H0YGN5 161 aa19.79■□□□□ 0.76
RAB40C-202ENST00000509637 PRKCZQ05513 592 aa19.79■□□□□ 0.76
RAB40C-202ENST00000509637 KIF22Q14807 665 aa19.79■□□□□ 0.76
RAB40C-202ENST00000509637 TBC1D9Q6ZT07 1266 aa19.79■□□□□ 0.76
RAB40C-202ENST00000509637 PRRT2Q7Z6L0 340 aaPredicted RBP19.79■□□□□ 0.76
RAB40C-202ENST00000509637 SCYL3Q8IZE3 742 aa19.79■□□□□ 0.76
RAB40C-202ENST00000509637 API5Q9BZZ5 524 aaKnown RBP19.79■□□□□ 0.76
RAB40C-202ENST00000509637 ABCF2Q9UG63 623 aa19.79■□□□□ 0.76
RAB40C-202ENST00000509637 MGAMO43451 1857 aa19.79■□□□□ 0.76
RAB40C-202ENST00000509637 GNRH1P01148 92 aa19.78■□□□□ 0.76
RAB40C-202ENST00000509637 BTDP43251 543 aa19.78■□□□□ 0.76
RAB40C-202ENST00000509637 MECOMQ03112 1051 aa19.78■□□□□ 0.76
RAB40C-202ENST00000509637 MTX1Q13505 466 aa19.78■□□□□ 0.76
RAB40C-202ENST00000509637 HMG20BQ9P0W2 317 aa19.78■□□□□ 0.76
RAB40C-202ENST00000509637 GPR75-ASB3A0A0A6YYF3 556 aa19.77■□□□□ 0.76
RAB40C-202ENST00000509637 FMNL1O95466 1100 aaPredicted RBP19.77■□□□□ 0.76
RAB40C-202ENST00000509637 GRK4P32298 578 aa19.77■□□□□ 0.76
RAB40C-202ENST00000509637 PRMT2P55345 433 aa19.77■□□□□ 0.76
RAB40C-202ENST00000509637 PICALMQ13492 652 aa19.77■□□□□ 0.76
RAB40C-202ENST00000509637 CEP290O15078 2479 aa19.77■□□□□ 0.75
RAB40C-202ENST00000509637 MYPNQ86TC9 1320 aa19.76■□□□□ 0.75
RAB40C-202ENST00000509637 PNMA6EA0A0J9YXQ4 647 aa19.76■□□□□ 0.75
RAB40C-202ENST00000509637 SRGAP3O43295 1099 aa19.76■□□□□ 0.75
RAB40C-202ENST00000509637 CT47B1P0C2W7 299 aaPredicted RBP19.76■□□□□ 0.75
RAB40C-202ENST00000509637 CCL5P13501 91 aa19.76■□□□□ 0.75
RAB40C-202ENST00000509637 MROH7-TTC4A0A0A0MT08 1334 aa19.76■□□□□ 0.75
RAB40C-202ENST00000509637 PDS5AQ29RF7 1337 aaKnown RBP19.76■□□□□ 0.75
RAB40C-202ENST00000509637 TRIOBPQ9H2D6 2365 aa19.75■□□□□ 0.75
RAB40C-202ENST00000509637 DOCK1Q14185 1865 aa19.74■□□□□ 0.75
RAB40C-202ENST00000509637 BCAR3O75815 825 aa19.74■□□□□ 0.75
RAB40C-202ENST00000509637 TRIM27P14373 513 aa19.74■□□□□ 0.75
RAB40C-202ENST00000509637 JAG1P78504 1218 aa19.74■□□□□ 0.75
RAB40C-202ENST00000509637 TREML2Q5T2D2 321 aa19.74■□□□□ 0.75
RAB40C-202ENST00000509637 GADL1Q6ZQY3 521 aa19.74■□□□□ 0.75
RAB40C-202ENST00000509637 DZIP1Q86YF9 867 aaKnown RBP19.74■□□□□ 0.75
RAB40C-202ENST00000509637 ZSCAN29Q8IWY8 852 aaPredicted RBP19.74■□□□□ 0.75
RAB40C-202ENST00000509637 RAET1EQ8TD07 263 aa19.74■□□□□ 0.75
RAB40C-202ENST00000509637 NSUN4Q96CB9 384 aaKnown RBP19.74■□□□□ 0.75
RAB40C-202ENST00000509637 PARK7Q99497 189 aaKnown RBP19.74■□□□□ 0.75
RAB40C-202ENST00000509637 UNC93B1Q9H1C4 597 aa19.74■□□□□ 0.75
RAB40C-202ENST00000509637 TRIM75PA6NK02 468 aa19.73■□□□□ 0.75
RAB40C-202ENST00000509637 CTNND1O60716 968 aaKnown RBP19.73■□□□□ 0.75
RAB40C-202ENST00000509637 GJB1P08034 283 aa19.73■□□□□ 0.75
RAB40C-202ENST00000509637 ELNP15502 786 aa19.73■□□□□ 0.75
RAB40C-202ENST00000509637 GJA8P48165 433 aa19.73■□□□□ 0.75
RAB40C-202ENST00000509637 ARHGAP45Q92619 1136 aa19.73■□□□□ 0.75
RAB40C-202ENST00000509637 MCAMP43121 646 aa19.72■□□□□ 0.75
RAB40C-202ENST00000509637 FLT3LGP49771 235 aa19.72■□□□□ 0.75
RAB40C-202ENST00000509637 SHROOM1Q2M3G4 852 aaPredicted RBP19.72■□□□□ 0.75
RAB40C-202ENST00000509637 ERICH6Q7L0X2 663 aa19.72■□□□□ 0.75
RAB40C-202ENST00000509637 ZGPATQ8N5A5 531 aaKnown RBP19.72■□□□□ 0.75
RAB40C-202ENST00000509637 NEUROD6Q96NK8 337 aa19.72■□□□□ 0.75
RAB40C-202ENST00000509637 PICK1Q9NRD5 415 aa19.72■□□□□ 0.75
RAB40C-202ENST00000509637 SIPA1L1O43166 1804 aa19.72■□□□□ 0.75
RAB40C-202ENST00000509637 TBC1D12O60347 775 aa19.71■□□□□ 0.75
RAB40C-202ENST00000509637 HOXD10P28358 340 aa19.71■□□□□ 0.75
RAB40C-202ENST00000509637 FASTKD5Q7L8L6 764 aaKnown RBP19.71■□□□□ 0.75
RAB40C-202ENST00000509637 RNF208Q9H0X6 261 aa19.71■□□□□ 0.75
RAB40C-202ENST00000509637 PEX10O60683 326 aa19.7■□□□□ 0.74
RAB40C-202ENST00000509637 GNAI3P08754 354 aa19.7■□□□□ 0.74
RAB40C-202ENST00000509637 ARID4AP29374 1257 aaPredicted RBP19.7■□□□□ 0.74
RAB40C-202ENST00000509637 FCGRTP55899 365 aa19.7■□□□□ 0.74
RAB40C-202ENST00000509637 MVPQ14764 893 aaKnown RBP19.7■□□□□ 0.74
RAB40C-202ENST00000509637 SPATA5Q8NB90 893 aa19.7■□□□□ 0.74
RAB40C-202ENST00000509637 CLUAP1Q96AJ1 413 aa19.7■□□□□ 0.74
RAB40C-202ENST00000509637 PRO3102Q9H379 93 aa19.7■□□□□ 0.74
RAB40C-202ENST00000509637 SLC45A1Q9Y2W3 748 aa19.7■□□□□ 0.74
RAB40C-202ENST00000509637 MYO5AQ9Y4I1 1855 aaKnown RBP19.69■□□□□ 0.74
RAB40C-202ENST00000509637 ADCY3O60266 1144 aa19.69■□□□□ 0.74
RAB40C-202ENST00000509637 NPM3O75607 178 aaKnown RBP19.69■□□□□ 0.74
RAB40C-202ENST00000509637 SPTY2D1Q68D10 685 aaPredicted RBP19.69■□□□□ 0.74
RAB40C-202ENST00000509637 ADGRA1Q86SQ6 560 aa19.69■□□□□ 0.74
RAB40C-202ENST00000509637 ANKRD13CQ8N6S4 541 aa19.69■□□□□ 0.74
RAB40C-202ENST00000509637 U2AF1L4Q8WU68 220 aaKnown RBP19.69■□□□□ 0.74
RAB40C-202ENST00000509637 SNRKQ9NRH2 765 aa19.69■□□□□ 0.74
RAB40C-202ENST00000509637 RBM27Q9P2N5 1060 aaKnown RBP19.69■□□□□ 0.74
RAB40C-202ENST00000509637 AKAP2Q9Y2D5 859 aa19.69■□□□□ 0.74
RAB40C-202ENST00000509637 SPP2Q13103 211 aa19.68■□□□□ 0.74
RAB40C-202ENST00000509637 CHRDL2Q6WN34 429 aa19.68■□□□□ 0.74
RAB40C-202ENST00000509637 SH3RF3Q8TEJ3 882 aaPredicted RBP19.68■□□□□ 0.74
RAB40C-202ENST00000509637 OSBPL5Q9H0X9 879 aaPredicted RBP19.68■□□□□ 0.74
RAB40C-202ENST00000509637 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.68■□□□□ 0.74
RAB40C-202ENST00000509637 BIN2Q9UBW5 565 aaPredicted RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms